Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5265 Papaver somniferum HOM05D001295 ORTHO05D005319 6.6e-168 594.0 300 100.0
PSO837G0039 Papaver somniferum HOM05D001295 ORTHO05D005319 7.3e-151 537.3 294 90.8
TAR633G1947 Trochodendron aralioides HOM05D001295 ORTHO05D005319 2.5e-95 352.8 292 64.0
Aqoxy5G00377 Aquilegia oxysepala HOM05D001295 ORTHO05D005319 1.8e-93 346.7 292 60.6
GSVIVG01004102001 Vitis vinifera HOM05D001295 ORTHO05D005319 2.0e-92 343.2 277 62.1
Actinidia34573 Actinidia chinensis HOM05D001295 ORTHO05D005319 4.2e-90 335.5 294 58.8
QL10p051312 Quercus lobata HOM05D001295 ORTHO05D005319 7.9e-89 331.3 280 57.5
CiPaw.01G095500 Carya illinoinensis HOM05D001295 ORTHO05D005319 1.8e-88 330.1 277 61.4
Dinv05087 Davidia involucrata HOM05D001295 ORTHO05D005319 4.4e-87 325.5 280 58.9
Manes.11G126000 Manihot esculenta HOM05D001295 ORTHO05D005319 1.8e-85 320.1 284 54.6
Peaxi162Scf00180g00045 Petunia axillaris HOM05D001295 ORTHO05D005319 5.3e-85 318.5 293 53.9
Cc03_g12290 Coffea canephora HOM05D001295 ORTHO05D005319 1.6e-84 317.0 281 54.8
PGSC0003DMG400026920 Solanum tuberosum HOM05D001295 ORTHO05D005319 1.6e-84 317.0 292 54.8
Sopen06g029480 Solanum pennellii HOM05D001295 ORTHO05D005319 2.9e-83 312.8 292 53.4
ATR0743G262 Amborella trichopoda HOM05D001295 ORTHO05D005319 6.5e-83 311.6 299 52.8
Atru.chr4.1272 Acer truncatum HOM05D001295 ORTHO05D005319 4.2e-82 308.9 286 55.2
Potri.007G132100 Populus trichocarpa HOM05D001295 ORTHO05D005319 4.2e-82 308.9 287 52.3
Nn1g09559 Nelumbo nucifera HOM05D001295 ORTHO05D005319 7.2e-82 308.1 230 63.9
CSS0006680 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 1.6e-81 307.0 258 58.9
CSS0045865 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 2.7e-81 306.2 256 59.0
CAN.G65.159 Capsicum annuum HOM05D001295 ORTHO05D005319 4.7e-81 305.4 296 51.4
Prupe.1G199500 Prunus persica HOM05D001295 ORTHO05D005319 4.7e-81 305.4 278 56.1
Lsat_1_v5_gn_3_110661 Lactuca sativa HOM05D001295 ORTHO05D005319 6.1e-81 305.1 298 52.3
Solyc06g073130.4 Solanum lycopersicum HOM05D001295 ORTHO05D005319 6.1e-81 305.1 312 50.3
Nitab4.5_0002553g0060 Nicotiana tabacum HOM05D001295 ORTHO05D005319 8.0e-81 304.7 334 48.2
Oeu020777.1 Olea europaea HOM05D001295 ORTHO05D005319 1.4e-80 303.9 282 54.6
QL10p051666 Quercus lobata HOM05D001295 ORTHO05D005319 4.4e-79 298.9 265 57.7
AUR62002356 Chenopodium quinoa HOM05D001295 ORTHO05D005319 4.8e-78 295.4 300 53.3
DCAR_028425 Daucus carota HOM05D001295 ORTHO05D005319 6.3e-78 295.0 282 53.9
COL.COLO4_09274 Corchorus olitorius HOM05D001295 ORTHO05D005319 3.1e-77 292.7 283 52.3
HanXRQChr13g0419451 Helianthus annuus HOM05D001295 ORTHO05D005319 9.1e-77 291.2 280 55.0
MD04G1046100 Malus domestica HOM05D001295 ORTHO05D005319 1.2e-76 290.8 279 53.0
Hund12401 Selenicereus undatus HOM05D001295 ORTHO05D005319 2.0e-76 290.0 302 52.3
Thecc.04G173300 Theobroma cacao HOM05D001295 ORTHO05D005319 2.7e-76 289.7 283 51.6
Cfa015203 Carpinus fangiana HOM05D001295 ORTHO05D005319 4.5e-76 288.9 237 60.8
Sc21g0002910 Simmondsia chinensis HOM05D001295 ORTHO05D005319 1.0e-75 287.7 273 53.5
MSTRG.4291 Avicennia marina HOM05D001295 ORTHO05D005319 1.7e-75 287.0 292 52.1
PGR142G2463 Punica granatum HOM05D001295 ORTHO05D005319 2.9e-75 286.2 285 51.2
Ca_01246_v3 Cicer arietinum L. HOM05D001295 ORTHO05D005319 3.8e-75 285.8 281 54.1
Sed0017723 Sechium edule HOM05D001295 ORTHO05D005319 5.0e-75 285.4 279 50.9
Eucgr.H00340 Eucalyptus grandis HOM05D001295 ORTHO05D005319 6.5e-75 285.0 301 52.5
VMungo1080G0958 Vigna mungo HOM05D001295 ORTHO05D005319 1.1e-74 284.3 282 52.5
Migut.G01307 Erythranthe guttata HOM05D001295 ORTHO05D005319 1.9e-74 283.5 292 50.3
Lj3g0016601 Lotus japonicus HOM05D001295 ORTHO05D005319 1.9e-74 283.5 292 52.7
TPR.G6512 Trifolium pratense HOM05D001295 ORTHO05D005319 2.3e-72 276.6 300 50.0
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 5.2e-72 275.4 283 45.9
Glyma.15G028500 Glycine max HOM05D001295 ORTHO05D005319 5.2e-72 275.4 284 51.8
Medtr2g099125 Medicago truncatula HOM05D001295 ORTHO05D005319 5.2e-72 275.4 280 52.5
Phvul.005G154600 Phaseolus vulgaris HOM05D001295 ORTHO05D005319 5.2e-72 275.4 280 52.9
Gorai.005G126300 Gossypium raimondii HOM05D001295 ORTHO05D005319 6.8e-72 275.0 280 50.7
ClCG06G001010 Citrullus lanatus HOM05D001295 ORTHO05D005319 2.0e-71 273.5 279 47.3
MELO3C022439.2 Cucumis melo HOM05D001295 ORTHO05D005319 9.8e-71 271.2 312 44.2
arahy.Tifrunner.gnm1.ann1.982DXJ Arachis hypogaea HOM05D001295 ORTHO05D005319 2.2e-70 270.0 286 51.7
SalBow8G2942 Salvia bowleyana HOM05D001295 ORTHO05D005319 2.8e-70 269.6 306 48.0
Ciclev10021666m.g Citrus clementina HOM05D001295 ORTHO05D005319 6.3e-70 268.5 279 51.6
HPP92_007597 Vanilla planifolia HOM05D001295 ORTHO05D005319 6.3e-70 268.5 276 51.1
Psat5g290520 Pisum sativum HOM05D001295 ORTHO05D005319 2.4e-69 266.5 292 49.3
TWI15G0408 Tripterygium wilfordii HOM05D001295 ORTHO05D005319 3.5e-68 262.7 283 51.6
Gohir.D08G098300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 1.9e-66 256.9 274 51.8
Gorai.004G105900 Gossypium raimondii HOM05D001295 ORTHO05D005319 5.5e-66 255.4 274 51.5
arahy.Tifrunner.gnm1.ann1.CA0DYB Arachis hypogaea HOM05D001295 ORTHO05D005319 1.2e-65 254.2 305 47.9
Duzib212G0222 Durio zibethinus HOM05D001295 ORTHO05D005319 2.1e-65 253.4 296 46.6
Sabra07G0107500 Salix brachista HOM05D001295 ORTHO05D005319 1.0e-64 251.1 269 51.3
AUR62023829 Chenopodium quinoa HOM05D001295 ORTHO05D005319 4.0e-64 249.2 253 52.6
arahy.Tifrunner.gnm1.ann1.1HI5HP Arachis hypogaea HOM05D001295 ORTHO05D005319 5.2e-64 248.8 312 47.1
Lalb_Chr14g0372571 Lupinus albus HOM05D001295 ORTHO05D005319 2.0e-63 246.9 277 45.5
COL.COLO4_21796 Corchorus olitorius HOM05D001295 ORTHO05D005319 7.5e-63 245.0 266 50.0
Nitab4.5_0001586g0250 Nicotiana tabacum HOM05D001295 ORTHO05D005319 1.7e-62 243.8 234 50.0
Migut.G01305 Erythranthe guttata HOM05D001295 ORTHO05D005319 3.7e-62 242.7 293 45.4
Lalb_Chr22g0352051 Lupinus albus HOM05D001295 ORTHO05D005319 8.3e-62 241.5 250 49.2
Carub.0004s2592 Capsella rubella HOM05D001295 ORTHO05D005319 1.1e-61 241.1 286 45.5
THA.LOC104803837 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 1.4e-61 240.7 309 42.4
Gohir.D02G111400 Gossypium hirsutum HOM05D001295 ORTHO05D005319 5.4e-61 238.8 278 45.3
Sabra07G0119300 Salix brachista HOM05D001295 ORTHO05D005319 9.2e-61 238.0 256 51.2
ECA240G1882 Erigeron canadensis HOM05D001295 ORTHO05D005319 1.2e-60 237.7 193 58.0
AL4G42200 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 1.6e-60 237.3 282 45.7
Rhsim09G0020700 Rhododendron simsii HOM05D001295 ORTHO05D005319 1.0e-59 234.6 304 43.4
CARHR138550 Cardamine hirsuta HOM05D001295 ORTHO05D005319 1.3e-59 234.2 284 44.4
Sp4g25550 Schrenkiella parvula HOM05D001295 ORTHO05D005319 1.3e-59 234.2 279 45.9
Thhalv10001762m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 2.3e-59 233.4 277 43.7
EL10Ac3g06020 Beta vulgaris HOM05D001295 ORTHO05D005319 8.6e-59 231.5 294 48.0
Gohir.A02G093300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 9.5e-58 228.0 237 49.8
Gohir.A08G092500 Gossypium hirsutum HOM05D001295 ORTHO05D005319 1.2e-57 227.6 274 48.5
Aa31LG1G25200 Aethionema arabicum HOM05D001295 ORTHO05D005319 3.6e-57 226.1 277 43.7
A05p03770 Brassica napus HOM05D001295 ORTHO05D005319 4.7e-57 225.7 285 43.5
FAN24G0827 Fragaria x ananassa HOM05D001295 ORTHO05D005319 4.7e-57 225.7 251 49.8
Ciclev10021418m.g Citrus clementina HOM05D001295 ORTHO05D005319 1.0e-56 224.6 302 42.1
BcaB02g08938 Brassica carinata HOM05D001295 ORTHO05D005319 5.2e-56 222.2 277 43.3
FvH4_2g24830 Fragaria vesca HOM05D001295 ORTHO05D005319 8.9e-56 221.5 251 49.4
Zm00001eb064040 Zea mays HOM05D001295 ORTHO05D005319 8.9e-56 221.5 279 44.1
FAN27G1301 Fragaria x ananassa HOM05D001295 ORTHO05D005319 1.5e-55 220.7 251 49.0
Manes.04G047700 Manihot esculenta HOM05D001295 ORTHO05D005319 3.4e-55 219.5 256 48.0
BraA05t23124Z Brassica rapa HOM05D001295 ORTHO05D005319 4.4e-55 219.2 249 49.8
AL3G12950 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 9.8e-55 218.0 268 46.3
BcaC02g12392 Brassica carinata HOM05D001295 ORTHO05D005319 9.8e-55 218.0 286 43.0
C04p04470 Brassica napus HOM05D001295 ORTHO05D005319 9.8e-55 218.0 286 43.0
AT3G03320 Arabidopsis thaliana HOM05D001295 ORTHO05D005319 1.3e-54 217.6 273 45.8
BolC4t22080H Brassica oleracea HOM05D001295 ORTHO05D005319 2.2e-54 216.9 286 43.0
BraA05t19365Z Brassica rapa HOM05D001295 ORTHO05D005319 2.9e-54 216.5 293 42.3
A05p43870 Brassica napus HOM05D001295 ORTHO05D005319 4.9e-54 215.7 266 47.4
RcHm_v2.0_Chr6g0292651 Rosa chinensis HOM05D001295 ORTHO05D005319 4.9e-54 215.7 251 47.8
Thhalv10021391m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 2.4e-53 213.4 266 45.1
C05p63460 Brassica napus HOM05D001295 ORTHO05D005319 3.2e-53 213.0 249 48.6
BolC5t35010H Brassica oleracea HOM05D001295 ORTHO05D005319 3.2e-53 213.0 249 49.0
Sp3g02350 Schrenkiella parvula HOM05D001295 ORTHO05D005319 3.2e-53 213.0 266 47.0
Lj3C135G1 Lonicera japonica HOM05D001295 ORTHO05D005319 4.1e-53 212.6 218 50.9
CARHR077360 Cardamine hirsuta HOM05D001295 ORTHO05D005319 4.6e-52 209.1 266 45.1
FAN15G1214 Fragaria x ananassa HOM05D001295 ORTHO05D005319 1.3e-51 207.6 251 47.4
Sed0000422 Sechium edule HOM05D001295 ORTHO05D005319 2.3e-51 206.8 266 47.7
Carub.0003s0249 Capsella rubella HOM05D001295 ORTHO05D005319 6.6e-51 205.3 266 45.5
THA.LOC104820845 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 6.6e-51 205.3 267 46.1
AagrBONN_evm.TU.Sc2ySwM_228.190 Anthoceros agrestis HOM05D001295 ORTHO05D005319 8.6e-51 204.9 306 39.5
ClCG07G011710 Citrullus lanatus HOM05D001295 ORTHO05D005319 1.9e-50 203.8 254 48.4
Migut.G01326 Erythranthe guttata HOM05D001295 ORTHO05D005319 1.6e-49 200.7 208 50.0
Mapoly0209s0009 Marchantia polymorpha HOM05D001295 ORTHO05D005319 1.6e-49 200.7 295 39.7
BcaC05g30303 Brassica carinata HOM05D001295 ORTHO05D005319 6.2e-49 198.7 254 46.1
CsaV3_4G002500 Cucumis sativus L. HOM05D001295 ORTHO05D005319 8.0e-49 198.4 248 49.6
Pp3c13_1370 Physcomitrium patens HOM05D001295 ORTHO05D005319 1.4e-48 197.6 321 38.3
Migut.G01331 Erythranthe guttata HOM05D001295 ORTHO05D005319 2.9e-46 189.9 201 50.2
Sabra07G0119200 Salix brachista HOM05D001295 ORTHO05D005319 3.7e-46 189.5 207 46.9
Thecc.04G173200 Theobroma cacao HOM05D001295 ORTHO05D005319 4.9e-46 189.1 216 49.1
Sabra07G0119100 Salix brachista HOM05D001295 ORTHO05D005319 6.4e-46 188.7 207 46.9
Aa31LG5G13780 Aethionema arabicum HOM05D001295 ORTHO05D005319 3.2e-45 186.4 283 40.3
SGA_v2.0_scaffold12G06175 Striga asiatica HOM05D001295 ORTHO05D005319 1.2e-44 184.5 295 40.7
vmacro00676 Vaccinium macrocarpon HOM05D001295 ORTHO05D005319 1.5e-42 177.6 130 66.2
RhsimUnG0137700 Rhododendron simsii HOM05D001295 ORTHO05D005319 4.7e-41 172.6 127 63.8
Hma1.2p1_0401F.1_g144800 Hydrangea macrophylla HOM05D001295 ORTHO05D005319 4.4e-39 166.0 151 52.3
vmacro00675 Vaccinium macrocarpon HOM05D001295 ORTHO05D005319 1.6e-36 157.5 166 49.4
AT2G43465 Arabidopsis thaliana HOM05D001295 ORTHO05D005319 3.5e-36 156.4 207 42.5
Haze_01445 Corylus avellana HOM05D001295 ORTHO05D005319 1.0e-35 154.8 149 53.7
C01p44730 Brassica napus HOM05D001295 ORTHO05D005319 9.5e-34 148.3 261 34.9
A09p42860 Brassica napus HOM05D001295 ORTHO05D005319 2.1e-33 147.1 217 39.6
SMO337G0100 Selaginella moellendorffii HOM05D001295 ORTHO05D005319 2.1e-33 147.1 165 47.9
Cpa.g.sc9.324 Carica papaya HOM05D001295 ORTHO05D005319 4.4e-31 139.4 97 66.0
Lj3g0015879 Lotus japonicus HOM05D001295 ORTHO05D005319 6.6e-27 125.6 146 46.6
unitig_37.g12026 Utricularia gibba HOM05D001295 ORTHO05D005319 4.3e-26 122.9 111 57.7
SalBow5G4879 Salvia bowleyana HOM05D001295 ORTHO05D005319 5.6e-26 122.5 164 43.3
Lj3A83T16 Lonicera japonica HOM05D001295 ORTHO05D005319 2.7e-20 103.6 64 70.3
BolC2t06464H Brassica oleracea HOM05D001295 ORTHO05D005319 6.0e-20 102.4 262 30.9
Sabra17G0001700 Salix brachista HOM05D001295 ORTHO05D005319 1.7e-14 84.3 103 42.7
MELO3C001160.2 Cucumis melo HOM05D001295 ORTHO05D005319 1.6e-12 77.8 71 56.3
Sabra17G0015200 Salix brachista HOM05D001295 ORTHO05D005319 8.7e-11 72.0 177 29.4
Sabra17G0000500 Salix brachista HOM05D001295 ORTHO05D005319 1.1e-08 65.1 82 40.2
AL4G36180 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 1.8e-08 64.3 117 36.8
Sabra17G0001500 Salix brachista HOM05D001295 ORTHO05D005319 4.0e-08 63.2 70 42.9
Glyma.13G345802 Glycine max HOM05D001295 ORTHO05D005319 1.7e-06 57.8 51 52.9


User provided reference genes

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