Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 8.2e-137 490.3 240 100.0
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 2.2e-126 455.7 239 91.6
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 1.4e-64 250.4 192 65.6
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 1.4e-59 233.8 179 62.6
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 2.2e-57 226.5 180 62.8
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 2.9e-57 226.1 207 53.1
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 1.2e-55 220.7 186 57.5
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 4.6e-55 218.8 183 60.1
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 4.3e-53 212.2 166 58.4
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 9.6e-53 211.1 199 54.8
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 2.8e-52 209.5 186 57.0
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 4.8e-52 208.8 201 54.7
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 4.8e-52 208.8 177 55.4
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 4.8e-52 208.8 167 58.7
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 8.1e-52 208.0 182 56.0
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 3.1e-51 206.1 162 57.4
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 5.3e-51 205.3 194 53.6
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 9.0e-51 204.5 162 56.8
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 4.5e-50 202.2 165 58.2
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 4.5e-50 202.2 165 58.2
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 4.5e-50 202.2 163 59.5
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 5.8e-50 201.8 188 56.4
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 7.6e-50 201.4 163 60.1
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 9.9e-50 201.1 172 58.7
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 9.9e-50 201.1 188 55.9
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 1.3e-49 200.7 194 52.1
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.3e-49 200.7 163 58.9
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 1.7e-49 200.3 250 45.2
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 2.2e-49 199.9 164 57.3
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 2.9e-49 199.5 165 57.6
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 2.9e-49 199.5 165 57.6
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 4.9e-49 198.7 200 52.5
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 4.9e-49 198.7 176 55.1
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 6.4e-49 198.4 161 60.2
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 1.9e-48 196.8 190 51.6
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 4.2e-48 195.7 184 52.2
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 5.4e-48 195.3 169 58.0
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 1.2e-47 194.1 158 58.2
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 7.9e-47 191.4 167 56.3
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 1.3e-46 190.7 183 53.6
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 2.3e-46 189.9 184 51.6
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 6.7e-46 188.3 188 48.9
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 8.7e-46 188.0 180 53.9
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 3.3e-45 186.0 208 49.5
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 2.8e-44 183.0 172 55.8
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 3.7e-44 182.6 232 44.0
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.4e-43 180.6 179 52.0
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 2.4e-43 179.9 190 50.0
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 5.3e-43 178.7 188 46.8
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 1.5e-42 177.2 230 43.9
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 2.0e-42 176.8 210 44.3
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 3.4e-42 176.0 193 46.6
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 1.3e-41 174.1 159 52.8
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.1e-40 171.0 237 42.6
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 5.5e-40 168.7 148 55.4
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 7.1e-40 168.3 192 46.4
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 1.3e-38 164.1 159 52.8
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 6.7e-38 161.8 174 48.3
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 1.1e-37 161.0 184 46.7
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 1.5e-37 160.6 192 44.3
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 2.8e-36 156.4 125 58.4
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 6.2e-36 155.2 200 46.0
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 3.1e-35 152.9 216 41.7
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 3.1e-35 152.9 107 63.6
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 5.3e-35 152.1 170 48.2
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 1.2e-34 151.0 151 52.3
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 1.2e-34 151.0 212 39.6
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 1.2e-34 151.0 200 42.5
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 5.8e-34 148.7 216 41.2
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 1.3e-33 147.5 206 44.2
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 1.4e-32 144.1 192 42.7
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 9.3e-32 141.4 159 49.1
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 2.1e-31 140.2 148 49.3
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 4.6e-31 139.0 215 38.1
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 6.7e-30 135.2 132 50.0
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 1.1e-29 134.4 124 51.6
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 1.5e-29 134.0 144 48.6
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 1.9e-29 133.7 113 55.8
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 2.5e-29 133.3 111 59.5
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 3.3e-29 132.9 147 46.9
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 9.7e-29 131.3 118 52.5
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 8.2e-28 128.3 119 50.4
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 5.5e-24 115.5 110 52.7
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 1.2e-23 114.4 140 45.0
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 7.9e-23 111.7 215 35.3
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 1.3e-22 110.9 78 66.7
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 4.1e-19 99.4 90 51.1
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 5.9e-18 95.5 94 48.9
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.0e-17 94.7 106 43.4
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.0e-17 94.7 105 43.8
AagrBONN_evm.TU.Sc2ySwM_228.2165 Anthoceros agrestis HOM05D007631 ORTHO05D009566 2.9e-17 93.2 170 34.7
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 5.5e-16 89.0 76 55.3
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 8.5e-09 65.1 57 49.1


User provided reference genes

Program Settings