Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5004 Papaver somniferum HOM05D005999 ORTHO05D003360 1.1e-153 546.6 279 100.0
PSO170G6629 Papaver somniferum HOM05D005999 ORTHO05D003360 1.7e-114 416.4 246 88.2
PSO210G1231 Papaver somniferum HOM05D005999 ORTHO05D003360 6.6e-114 414.5 246 88.2
TAR628G0133 Trochodendron aralioides HOM05D005999 ORTHO05D003360 2.0e-49 200.3 246 52.0
Aqoxy5G01092 Aquilegia oxysepala HOM05D005999 ORTHO05D002169 1.3e-48 197.6 258 49.2
Nn6g31889 Nelumbo nucifera HOM05D005999 ORTHO05D003360 2.8e-43 179.9 250 48.0
GSVIVG01005198001 Vitis vinifera HOM05D005999 ORTHO05D003360 7.5e-41 171.8 240 43.8
Dinv08545 Davidia involucrata HOM05D005999 ORTHO05D003360 6.3e-40 168.7 253 45.1
CSS0001074 Camellia sinensis var. sinensis HOM05D005999 ORTHO05D003360 7.8e-38 161.8 243 41.6
CSS0035556 Camellia sinensis var. sinensis HOM05D005999 ORTHO05D003360 3.8e-37 159.5 243 41.2
CANSAT25G3254 Cannabis sativa HOM05D005999 ORTHO05D003360 6.6e-37 158.7 239 46.0
Manes.01G151300 Manihot esculenta HOM05D005999 ORTHO05D003360 5.6e-36 155.6 262 41.6
Gohir.A02G174800 Gossypium hirsutum HOM05D005999 ORTHO05D003360 8.0e-35 151.8 266 40.2
Hma1.2p1_0315F.1_g122640 Hydrangea macrophylla HOM05D005999 ORTHO05D003360 2.3e-34 150.2 285 38.2
Cfa007034 Carpinus fangiana HOM05D005999 ORTHO05D003360 4.0e-34 149.4 287 39.0
Duzib147G0884 Durio zibethinus HOM05D005999 ORTHO05D003360 4.0e-34 149.4 254 42.9
PGR119G0821 Punica granatum HOM05D005999 ORTHO05D003360 8.9e-34 148.3 244 42.2
Actinidia28736 Actinidia chinensis HOM05D005999 ORTHO05D003360 3.4e-33 146.4 263 40.7
ClCG01G020640 Citrullus lanatus HOM05D005999 ORTHO05D003360 3.4e-33 146.4 243 42.8
MELO3C007947.2 Cucumis melo HOM05D005999 ORTHO05D003360 9.8e-33 144.8 220 44.1
Gorai.003G005300 Gossypium raimondii HOM05D005999 ORTHO05D003360 1.3e-32 144.4 266 38.7
Gohir.D03G005000 Gossypium hirsutum HOM05D005999 ORTHO05D003360 1.7e-32 144.1 270 38.9
Lj6A806T47 Lonicera japonica HOM05D005999 ORTHO05D003360 2.2e-32 143.7 244 43.0
Thecc.01G010800 Theobroma cacao HOM05D005999 ORTHO05D003360 2.2e-32 143.7 248 39.9
Sc16g0001790 Simmondsia chinensis HOM05D005999 ORTHO05D003360 2.9e-32 143.3 259 43.2
Haze_03698 Corylus avellana HOM05D005999 ORTHO05D003360 4.9e-32 142.5 287 38.0
Duzib187G1063 Durio zibethinus HOM05D005999 ORTHO05D003360 4.9e-32 142.5 247 39.7
Cc01_g06010 Coffea canephora HOM05D005999 ORTHO05D003360 8.3e-32 141.7 256 39.1
RcHm_v2.0_Chr2g0098251 Rosa chinensis HOM05D005999 ORTHO05D003360 8.3e-32 141.7 247 39.7
MBI05_g32278_MAGBIO Magnolia biondii HOM05D005999 ORTHO05D003360 1.1e-31 141.4 248 38.7
TWI73G0962 Tripterygium wilfordii HOM05D005999 ORTHO05D003360 1.8e-31 140.6 280 37.5
Nitab4.5_0005409g0010 Nicotiana tabacum HOM05D005999 ORTHO05D003360 2.4e-31 140.2 257 40.1
CDE05G3499 Ceratophyllum demersum HOM05D005999 ORTHO05D003360 5.4e-31 139.0 211 39.8
Solyc02g061820.4 Solanum lycopersicum HOM05D005999 ORTHO05D003360 5.4e-31 139.0 274 36.1
EL10Ac6g13337 Beta vulgaris HOM05D005999 ORTHO05D003360 7.0e-31 138.7 291 35.7
CsaV3_6G047550 Cucumis sativus L. HOM05D005999 ORTHO05D003360 9.2e-31 138.3 239 43.1
PGSC0003DMG400008679 Solanum tuberosum HOM05D005999 ORTHO05D003360 1.6e-30 137.5 246 37.0
Nitab4.5_0000188g0250 Nicotiana tabacum HOM05D005999 ORTHO05D003360 2.7e-30 136.7 236 42.4
Prupe.7G175600 Prunus persica HOM05D005999 ORTHO05D003360 2.7e-30 136.7 249 40.2
Eucgr.I02298 Eucalyptus grandis HOM05D005999 ORTHO05D003360 1.3e-29 134.4 232 40.5
FAN19G2768 Fragaria x ananassa HOM05D005999 ORTHO05D003360 1.3e-29 134.4 242 40.1
Lj2g0014093 Lotus japonicus HOM05D005999 ORTHO05D003360 1.3e-29 134.4 248 41.1
QL06p052235 Quercus lobata HOM05D005999 ORTHO05D003360 1.7e-29 134.0 247 38.5
Medtr5g022050 Medicago truncatula HOM05D005999 ORTHO05D003360 2.3e-29 133.7 231 40.3
Ca_24948_v3 Cicer arietinum L. HOM05D005999 ORTHO05D003360 3.0e-29 133.3 245 41.6
CiPaw.08G125500 Carya illinoinensis HOM05D005999 ORTHO05D003360 8.6e-29 131.7 249 39.8
Ciclev10025620m.g Citrus clementina HOM05D005999 ORTHO05D003360 8.6e-29 131.7 253 37.9
Sopen02g012860 Solanum pennellii HOM05D005999 ORTHO05D003360 1.9e-28 130.6 274 34.7
vmacro18444 Vaccinium macrocarpon HOM05D005999 ORTHO05D003360 1.9e-28 130.6 250 40.8
Lsat_1_v5_gn_4_143840 Lactuca sativa HOM05D005999 ORTHO05D003360 3.3e-28 129.8 240 40.0
Rhsim08G0029800 Rhododendron simsii HOM05D005999 ORTHO05D003360 9.5e-28 128.3 239 41.4
Potri.007G060400 Populus trichocarpa HOM05D005999 ORTHO05D003360 1.2e-27 127.9 212 42.0
arahy.Tifrunner.gnm1.ann1.74V199 Arachis hypogaea HOM05D005999 ORTHO05D003360 2.8e-27 126.7 198 41.9
arahy.Tifrunner.gnm1.ann1.JK0YGC Arachis hypogaea HOM05D005999 ORTHO05D003360 2.8e-27 126.7 198 41.9
Lalb_Chr05g0212151 Lupinus albus HOM05D005999 ORTHO05D003360 2.8e-27 126.7 279 35.1
CAN.G865.12 Capsicum annuum HOM05D005999 ORTHO05D003360 3.6e-27 126.3 267 34.5
DCAR_011582 Daucus carota HOM05D005999 ORTHO05D003360 4.7e-27 125.9 242 36.0
Sabra05G0086500 Salix brachista HOM05D005999 ORTHO05D003360 4.7e-27 125.9 197 41.1
MSTRG.3620 Avicennia marina HOM05D005999 ORTHO05D003360 8.0e-27 125.2 246 35.8
MD15G1236900 Malus domestica HOM05D005999 ORTHO05D003360 1.1e-26 124.8 250 38.0
FvH4_1g10990 Fragaria vesca HOM05D005999 ORTHO05D003360 1.4e-26 124.4 242 38.4
Psat2g151600 Pisum sativum HOM05D005999 ORTHO05D003360 2.3e-26 123.6 248 40.3
AT5G66055 Arabidopsis thaliana HOM05D005999 ORTHO05D003360 3.1e-26 123.2 236 36.9
Sed0006391 Sechium edule HOM05D005999 ORTHO05D003360 3.1e-26 123.2 229 38.0
Atru.chr3.914 Acer truncatum HOM05D005999 ORTHO05D003360 4.0e-26 122.9 262 34.7
Atru.chr3.919 Acer truncatum HOM05D005999 ORTHO05D003360 4.0e-26 122.9 262 34.7
Aa31LG9G1330 Aethionema arabicum HOM05D005999 ORTHO05D003360 4.0e-26 122.9 221 36.2
Lalb_Chr16g0377331 Lupinus albus HOM05D005999 ORTHO05D003360 6.8e-26 122.1 219 37.4
FAN23G1568 Fragaria x ananassa HOM05D005999 ORTHO05D003360 1.2e-25 121.3 236 37.3
HPP92_001740 Vanilla planifolia HOM05D005999 ORTHO05D003360 1.5e-25 120.9 185 42.2
Carub.0008s2845 Capsella rubella HOM05D005999 ORTHO05D003360 2.0e-25 120.6 241 36.1
HanXRQChr09g0257041 Helianthus annuus HOM05D005999 ORTHO05D003360 3.4e-25 119.8 173 43.4
Potri.005G105800 Populus trichocarpa HOM05D005999 ORTHO05D003360 5.8e-25 119.0 245 36.3
TPR.G25134 Trifolium pratense HOM05D005999 ORTHO05D003360 5.8e-25 119.0 250 35.6
Sp2g30630 Schrenkiella parvula HOM05D005999 ORTHO05D003360 7.5e-25 118.6 231 35.1
Migut.L00736 Erythranthe guttata HOM05D005999 ORTHO05D003360 9.8e-25 118.2 252 35.3
AL8G45550 Arabidopsis lyrata HOM05D005999 ORTHO05D003360 1.3e-24 117.9 226 36.3
CARHR281700 Cardamine hirsuta HOM05D005999 ORTHO05D003360 3.7e-24 116.3 249 34.5
C09p12060 Brassica napus HOM05D005999 ORTHO05D003360 4.9e-24 115.9 211 37.0
THA.LOC104826498 Tarenaya hassleriana HOM05D005999 ORTHO05D003360 6.4e-24 115.5 238 36.6
Hund16623 Selenicereus undatus HOM05D005999 ORTHO05D003360 1.9e-23 114.0 184 42.4
Thhalv10004296m.g Eutrema salsugineum HOM05D005999 ORTHO05D003360 3.2e-23 113.2 221 33.5
BolC9t54096H Brassica oleracea HOM05D005999 ORTHO05D003360 9.2e-23 111.7 213 36.2
A09p10170 Brassica napus HOM05D005999 ORTHO05D003360 1.2e-22 111.3 212 35.8
BcaC04g23109 Brassica carinata HOM05D005999 ORTHO05D003360 1.6e-22 110.9 213 36.2
BcaB04g20127 Brassica carinata HOM05D005999 ORTHO05D003360 2.0e-22 110.5 211 35.1
BraA09t36663Z Brassica rapa HOM05D005999 ORTHO05D003360 2.0e-22 110.5 212 35.4
SGA_v2.0_scaffold58G20568 Striga asiatica HOM05D005999 ORTHO05D003360 1.3e-21 107.8 259 34.7
Glyma.01G161900 Glycine max HOM05D005999 ORTHO05D003360 1.9e-20 104.0 254 36.2
Cpa.g.sc6.318 Carica papaya HOM05D005999 ORTHO05D003360 2.5e-20 103.6 189 39.7
ATR0661G352 Amborella trichopoda HOM05D005999 ORTHO05D003360 3.3e-20 103.2 284 34.5
Phvul.002G104000 Phaseolus vulgaris HOM05D005999 ORTHO05D003360 4.3e-20 102.8 252 35.3
SalBow5G5732 Salvia bowleyana HOM05D005999 ORTHO05D003360 4.3e-20 102.8 286 29.7
Medtr5g023090 Medicago truncatula HOM05D005999 ORTHO05D003360 2.8e-19 100.1 266 35.3
Glyma.11G081800 Glycine max HOM05D005999 ORTHO05D003360 1.4e-18 97.8 254 34.3
VMungo1215G1128 Vigna mungo HOM05D005999 ORTHO05D003360 3.1e-18 96.7 226 35.0
Ah.02g129080 Amaranthus hybridus HOM05D005999 ORTHO05D003360 2.9e-16 90.1 237 32.9
Oeu020651.1 Olea europaea HOM05D005999 ORTHO05D003360 6.4e-16 89.0 144 42.4
Os03g0135600 Oryza sativa ssp. japonica HOM05D005999 ORTHO05D003360 4.6e-14 82.8 254 33.5
Zm00001eb002820 Zea mays HOM05D005999 ORTHO05D003360 1.0e-13 81.6 223 30.9
VMungo1215G2992 Vigna mungo HOM05D005999 ORTHO05D003360 2.5e-12 77.0 231 31.2
Glyma.11G081900 Glycine max HOM05D005999 ORTHO05D003360 1.2e-11 74.7 178 33.7
COL.COLO4_22501 Corchorus olitorius HOM05D005999 ORTHO05D003360 2.8e-11 73.6 109 42.2
ECA232G4368 Erigeron canadensis HOM05D005999 ORTHO05D003360 2.8e-11 73.6 120 39.2
SalBow3G2044 Salvia bowleyana HOM05D005999 ORTHO05D003360 2.8e-11 73.6 155 33.5
Phvul.002G103900 Phaseolus vulgaris HOM05D005999 ORTHO05D003360 8.1e-11 72.0 195 32.8
Peaxi162Scf00439g00012 Petunia axillaris HOM05D005999 ORTHO05D003360 1.1e-10 71.6 179 34.1
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 8.4e-08 62.0 180 27.2
SalBow6G0049 Salvia bowleyana HOM05D005999 ORTHO05D003360 1.4e-07 61.2 130 28.5
SalBow6G2335 Salvia bowleyana HOM05D002275 ORTHO05D003360 1.9e-07 60.8 129 27.9


User provided reference genes

Program Settings