Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 9.7e-110 400.2 209 100.0
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 8.5e-98 360.5 209 91.9
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 1.1e-60 237.3 214 65.0
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.9e-52 209.9 218 59.2
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 8.6e-50 201.1 213 57.3
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 7.3e-49 198.0 208 55.3
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 2.8e-48 196.1 210 59.0
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 8.1e-48 194.5 211 55.0
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.4e-47 193.7 214 54.2
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 2.4e-47 193.0 210 57.6
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 5.2e-47 191.8 173 62.4
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 5.2e-47 191.8 208 53.8
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 5.2e-47 191.8 195 56.4
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 1.5e-46 190.3 184 57.1
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 2.0e-46 189.9 187 58.8
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.0e-46 189.9 188 59.0
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 2.0e-46 189.9 136 71.3
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 2.0e-46 189.9 216 52.8
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 3.4e-46 189.1 144 68.8
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 3.4e-46 189.1 209 56.5
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 4.4e-46 188.7 210 54.8
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 4.4e-46 188.7 209 54.5
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 5.8e-46 188.3 209 55.5
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 7.6e-46 188.0 148 64.9
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 7.6e-46 188.0 162 62.3
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 9.9e-46 187.6 174 59.8
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 9.9e-46 187.6 117 78.6
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 1.3e-45 187.2 153 67.3
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 2.2e-45 186.4 124 75.0
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 3.8e-45 185.7 124 73.4
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 3.8e-45 185.7 137 70.8
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 3.8e-45 185.7 124 75.0
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 3.8e-45 185.7 209 54.5
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 4.9e-45 185.3 167 61.1
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 4.9e-45 185.3 183 59.0
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 6.4e-45 184.9 188 56.9
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 6.4e-45 184.9 135 71.9
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 8.4e-45 184.5 183 56.8
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 8.4e-45 184.5 175 58.3
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.1e-44 184.1 218 51.8
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 1.4e-44 183.7 165 61.2
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.4e-44 183.7 182 56.6
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.9e-44 183.3 118 78.8
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 2.4e-44 183.0 218 52.3
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 4.2e-44 182.2 155 65.8
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 4.2e-44 182.2 117 77.8
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 7.1e-44 181.4 161 61.5
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 7.1e-44 181.4 213 54.0
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 9.2e-44 181.0 206 55.8
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 1.2e-43 180.6 171 60.2
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 1.6e-43 180.3 209 54.5
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 1.6e-43 180.3 105 84.8
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 2.1e-43 179.9 118 77.1
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 2.1e-43 179.9 157 64.3
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 2.1e-43 179.9 215 52.1
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.1e-43 179.9 195 55.4
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 2.1e-43 179.9 166 60.2
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 7.8e-43 177.9 103 84.5
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 7.8e-43 177.9 203 53.7
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 1.0e-42 177.6 172 58.1
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.3e-42 177.2 169 59.8
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 1.7e-42 176.8 124 71.0
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 2.3e-42 176.4 165 59.4
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 2.3e-42 176.4 123 72.4
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 2.3e-42 176.4 134 71.6
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 3.0e-42 176.0 101 86.1
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 3.9e-42 175.6 109 83.5
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 3.9e-42 175.6 169 59.2
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 3.9e-42 175.6 116 76.7
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 5.1e-42 175.3 118 74.6
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 5.1e-42 175.3 158 61.4
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 6.6e-42 174.9 161 58.4
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 6.6e-42 174.9 112 78.6
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 8.7e-42 174.5 112 78.6
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 8.7e-42 174.5 171 59.6
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 8.7e-42 174.5 112 78.6
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 8.7e-42 174.5 112 78.6
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 8.7e-42 174.5 103 83.5
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 1.1e-41 174.1 102 82.4
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 1.5e-41 173.7 184 52.7
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 1.5e-41 173.7 184 52.7
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 1.5e-41 173.7 139 64.7
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 1.5e-41 173.7 112 78.6
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 1.5e-41 173.7 211 52.1
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.5e-41 173.7 116 73.3
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 1.9e-41 173.3 111 77.5
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 1.9e-41 173.3 110 79.1
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 2.5e-41 172.9 213 50.7
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 2.5e-41 172.9 178 55.6
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 3.3e-41 172.6 161 60.9
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 3.3e-41 172.6 112 77.7
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 4.3e-41 172.2 103 81.6
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 7.3e-41 171.4 188 51.1
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.3e-40 170.6 105 79.0
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.3e-40 170.6 105 79.0
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 6.2e-40 168.3 216 49.5
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 2.4e-39 166.4 129 69.0
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 2.4e-39 166.4 106 75.5
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 2.4e-39 166.4 112 71.4
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 9.0e-39 164.5 103 80.6
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 9.9e-38 161.0 187 51.9
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 1.2e-35 154.1 101 72.3
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 2.1e-35 153.3 103 68.9
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 4.6e-35 152.1 104 69.2
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 3.0e-34 149.4 103 68.9
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 5.3e-31 138.7 93 75.3
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 1.4e-28 130.6 98 62.2
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 5.4e-28 128.6 74 82.4
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 3.9e-26 122.5 71 81.7
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 4.0e-23 112.5 63 87.3
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 3.2e-20 102.8 93 54.8
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 1.5e-17 94.0 56 80.4
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 4.3e-17 92.4 74 59.5
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 3.7e-16 89.4 44 93.2
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 2.6e-14 83.2 62 67.7
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 7.1e-12 75.1 45 77.8
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 5.7e-09 65.5 44 68.2
AUR62008132 Chenopodium quinoa HOM05D003967 ORTHO05D004531 2.6e-06 56.6 83 31.3
AUR62028714 Chenopodium quinoa HOM05D003967 ORTHO05D004531 3.4e-06 56.2 83 31.3
Duzib133G1035 Durio zibethinus HOM05D003967 ORTHO05D004531 4.5e-06 55.8 125 29.6


User provided reference genes

Program Settings