Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4886 Papaver somniferum HOM05D003778 ORTHO05D004418 0.0e+00 1168.7 564 100.0
PSO478G4461 Papaver somniferum HOM05D003778 ORTHO05D004418 0.0e+00 1168.7 564 100.0
Haze_11725 Corylus avellana HOM05D003778 ORTHO05D004418 6.1e-308 1060.1 563 88.1
TAR035G0003 Trochodendron aralioides HOM05D003778 ORTHO05D004418 1.4e-307 1058.9 563 88.6
TAR629G2113 Trochodendron aralioides HOM05D003778 ORTHO05D004418 3.9e-307 1057.4 563 88.5
SGA_v2.0_scaffold223G42894 Striga asiatica HOM05D003778 ORTHO05D004418 1.5e-306 1055.4 561 88.8
Migut.M01947 Erythranthe guttata HOM05D003778 ORTHO05D004418 2.6e-306 1054.7 562 89.0
CANSAT78G1874 Cannabis sativa HOM05D003778 ORTHO05D004418 9.7e-306 1052.7 563 88.6
Dinv17604 Davidia involucrata HOM05D003778 ORTHO05D004418 1.2e-303 1045.8 563 87.7
Potri.008G084800 Populus trichocarpa HOM05D003778 ORTHO05D004418 2.6e-303 1044.6 561 87.7
Potri.010G170000 Populus trichocarpa HOM05D003778 ORTHO05D004418 5.9e-303 1043.5 561 87.9
Sabra08G0063000 Salix brachista HOM05D003778 ORTHO05D004418 5.9e-303 1043.5 564 87.2
Lalb_Chr01g0001531 Lupinus albus HOM05D003778 ORTHO05D004418 7.7e-303 1043.1 563 88.5
Actinidia04080 Actinidia chinensis HOM05D003778 ORTHO05D004418 1.0e-302 1042.7 563 87.2
PGR004G0624 Punica granatum HOM05D003778 ORTHO05D004418 1.7e-302 1042.0 565 86.9
SalBow8G3862 Salvia bowleyana HOM05D003778 ORTHO05D004418 2.2e-302 1041.6 564 87.8
arahy.Tifrunner.gnm1.ann1.G65HTE Arachis hypogaea HOM05D003778 ORTHO05D004418 6.5e-302 1040.0 563 87.2
MSTRG.16322 Avicennia marina HOM05D003778 ORTHO05D004418 6.5e-302 1040.0 564 87.6
DCAR_002565 Daucus carota HOM05D003778 ORTHO05D004418 1.1e-301 1039.3 563 87.6
DCAR_030405 Daucus carota HOM05D003778 ORTHO05D004418 1.5e-301 1038.9 563 87.7
CiPaw.06G057600 Carya illinoinensis HOM05D003778 ORTHO05D004418 4.2e-301 1037.3 563 87.4
SalBow2G0375 Salvia bowleyana HOM05D003778 ORTHO05D004418 4.2e-301 1037.3 564 87.2
QL03p043582 Quercus lobata HOM05D003778 ORTHO05D004418 5.5e-301 1036.9 563 86.5
VMungo1127G1615 Vigna mungo HOM05D003778 ORTHO05D004418 1.6e-300 1035.4 563 87.7
Lj6A722T93 Lonicera japonica HOM05D003778 ORTHO05D004418 2.1e-300 1035.0 566 87.3
Lalb_Chr03g0024881 Lupinus albus HOM05D003778 ORTHO05D004418 6.1e-300 1033.5 563 87.7
Psat7g174000 Pisum sativum HOM05D003778 ORTHO05D004418 5.2e-299 1030.4 563 86.7
Sabra10G0129800 Salix brachista HOM05D003778 ORTHO05D004418 5.2e-299 1030.4 561 87.0
Glyma.11G103500 Glycine max HOM05D003778 ORTHO05D004418 6.7e-299 1030.0 563 87.2
Thecc.02G311500 Theobroma cacao HOM05D003778 ORTHO05D004418 6.7e-299 1030.0 563 86.9
Aqoxy3G04278 Aquilegia oxysepala HOM05D003778 ORTHO05D004418 8.8e-299 1029.6 563 86.5
Eucgr.J00851 Eucalyptus grandis HOM05D003778 ORTHO05D004418 8.8e-299 1029.6 563 86.1
MBI03_g24012_MAGBIO Magnolia biondii HOM05D003778 ORTHO05D004418 1.2e-298 1029.2 563 86.5
Rhsim09G0073500 Rhododendron simsii HOM05D003778 ORTHO05D004418 1.5e-298 1028.9 563 87.0
Cc09_g06490 Coffea canephora HOM05D003778 ORTHO05D004418 4.4e-298 1027.3 561 86.5
Gohir.A13G026100 Gossypium hirsutum HOM05D003778 ORTHO05D004418 4.4e-298 1027.3 564 86.3
Gohir.D13G024700 Gossypium hirsutum HOM05D003778 ORTHO05D004418 7.5e-298 1026.5 564 86.7
COL.COLO4_27669 Corchorus olitorius HOM05D003778 ORTHO05D004418 9.7e-298 1026.2 563 86.3
TPR.G21559 Trifolium pratense HOM05D003778 ORTHO05D004418 9.7e-298 1026.2 563 86.0
vmacro00468 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 9.7e-298 1026.2 563 87.0
Gorai.013G027900 Gossypium raimondii HOM05D003778 ORTHO05D004418 1.3e-297 1025.8 564 86.7
arahy.Tifrunner.gnm1.ann1.J2YHHP Arachis hypogaea HOM05D003778 ORTHO05D004418 1.7e-297 1025.4 563 86.5
Rhsim09G0073400 Rhododendron simsii HOM05D003778 ORTHO05D004418 2.2e-297 1025.0 563 86.9
Phvul.011G031700 Phaseolus vulgaris HOM05D003778 ORTHO05D004418 6.3e-297 1023.5 563 87.2
Lj3g0022719 Lotus japonicus HOM05D003778 ORTHO05D004418 1.8e-296 1021.9 563 85.6
Duzib248G0532 Durio zibethinus HOM05D003778 ORTHO05D004418 7.0e-296 1020.0 564 85.5
CSS0038233 Camellia sinensis var. sinensis HOM05D003778 ORTHO05D004418 1.2e-295 1019.2 563 85.8
TWI74G0502 Tripterygium wilfordii HOM05D003778 ORTHO05D004418 1.2e-295 1019.2 563 86.0
Medtr4g074350 Medicago truncatula HOM05D003778 ORTHO05D004418 1.6e-295 1018.8 563 86.3
Manes.03G081200 Manihot esculenta HOM05D003778 ORTHO05D004418 2.0e-295 1018.5 561 85.7
Ca_03035_v3 Cicer arietinum L. HOM05D003778 ORTHO05D004418 2.7e-295 1018.1 563 86.1
TWI77G0069 Tripterygium wilfordii HOM05D003778 ORTHO05D004418 5.9e-295 1016.9 563 85.6
Prupe.1G345300 Prunus persica HOM05D003778 ORTHO05D004418 7.7e-295 1016.5 563 85.6
Atru.chr11.1231 Acer truncatum HOM05D003778 ORTHO05D004418 1.3e-294 1015.8 563 85.4
Atru.chr11.1319 Acer truncatum HOM05D003778 ORTHO05D004418 1.3e-294 1015.8 563 85.4
ClCG09G004610 Citrullus lanatus HOM05D003778 ORTHO05D004418 2.2e-294 1015.0 561 85.4
MD13G1007700 Malus domestica HOM05D003778 ORTHO05D004418 1.5e-293 1012.3 563 85.3
MD16G1000400 Malus domestica HOM05D003778 ORTHO05D004418 1.5e-293 1012.3 563 85.1
ATR0618G344 Amborella trichopoda HOM05D003778 ORTHO05D004418 1.4e-291 1005.7 556 84.5
SEGI_38803 Sequoiadendron giganteum HOM05D003778 ORTHO05D004418 2.3e-291 1005.0 564 84.8
THA.LOC104804923 Tarenaya hassleriana HOM05D003778 ORTHO05D004418 4.0e-291 1004.2 565 85.7
Nitab4.5_0000265g0030 Nicotiana tabacum HOM05D003778 ORTHO05D004418 6.8e-291 1003.4 552 85.1
Hund24279 Selenicereus undatus HOM05D003778 ORTHO05D004418 6.8e-291 1003.4 550 85.3
MELO3C023603.2 Cucumis melo HOM05D003778 ORTHO05D004418 5.7e-290 1000.3 563 83.1
Sc06g0007850 Simmondsia chinensis HOM05D003778 ORTHO05D004418 5.7e-290 1000.3 563 85.3
HanXRQChr13g0388101 Helianthus annuus HOM05D003778 ORTHO05D004418 1.3e-289 999.2 564 84.2
CsaV3_7G030530 Cucumis sativus L. HOM05D003778 ORTHO05D004418 1.1e-288 996.1 563 82.8
ECA233G5967 Erigeron canadensis HOM05D003778 ORTHO05D004418 1.1e-288 996.1 564 84.0
Ciclev10030984m.g Citrus clementina HOM05D003778 ORTHO05D004418 3.1e-288 994.6 563 84.0
Peaxi162Scf01123g00017 Petunia axillaris HOM05D003778 ORTHO05D004418 1.6e-287 992.3 562 82.9
Sed0012416 Sechium edule HOM05D003778 ORTHO05D004418 2.0e-287 991.9 563 83.5
Lsat_1_v5_gn_4_26521 Lactuca sativa HOM05D003778 ORTHO05D004418 4.5e-287 990.7 565 83.4
Lsat_1_v5_gn_8_32421 Lactuca sativa HOM05D003778 ORTHO05D004418 5.9e-287 990.3 562 84.2
CDE05G2073 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 1.0e-286 989.6 562 83.5
Sp3g17830 Schrenkiella parvula HOM05D003778 ORTHO05D004418 1.0e-286 989.6 565 83.7
ECA234G2331 Erigeron canadensis HOM05D003778 ORTHO05D004418 2.2e-286 988.4 557 83.8
CAN.G79.46 Capsicum annuum HOM05D003778 ORTHO05D004418 2.9e-286 988.0 552 83.7
HanXRQChr01g0028571 Helianthus annuus HOM05D003778 ORTHO05D004418 2.9e-286 988.0 557 83.8
BraA05t21813Z Brassica rapa HOM05D003778 ORTHO05D004418 5.0e-286 987.3 565 83.9
BcaC05g28402 Brassica carinata HOM05D003778 ORTHO05D004418 1.1e-285 986.1 565 83.7
A05p29300 Brassica napus HOM05D003778 ORTHO05D004418 1.1e-285 986.1 565 83.7
C05p44820 Brassica napus HOM05D003778 ORTHO05D004418 1.1e-285 986.1 565 83.7
A01p34930 Brassica napus HOM05D003778 ORTHO05D004418 1.9e-285 985.3 565 83.4
BcaB06g26051 Brassica carinata HOM05D003778 ORTHO05D004418 2.5e-285 984.9 565 83.5
C01p44340 Brassica napus HOM05D003778 ORTHO05D004418 3.2e-285 984.6 565 83.2
BolC1t04399H Brassica oleracea HOM05D003778 ORTHO05D004418 3.2e-285 984.6 565 83.2
Thhalv10020412m.g Eutrema salsugineum HOM05D003778 ORTHO05D004418 3.2e-285 984.6 565 83.2
Aa31LG8G6590 Aethionema arabicum HOM05D003778 ORTHO05D004418 5.5e-285 983.8 565 83.4
BolC5t33208H Brassica oleracea HOM05D003778 ORTHO05D004418 5.5e-285 983.8 565 83.5
Ah.01g001630 Amaranthus hybridus HOM05D003778 ORTHO05D004418 9.5e-285 983.0 550 84.2
AUR62017664 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.6e-284 982.2 549 84.2
RcHm_v2.0_Chr4g0446441 Rosa chinensis HOM05D003778 ORTHO05D004418 2.8e-284 981.5 567 82.5
PGSC0003DMG400011801 Solanum tuberosum HOM05D003778 ORTHO05D004418 2.8e-284 981.5 552 83.3
BraA01t03576Z Brassica rapa HOM05D003778 ORTHO05D004418 3.6e-284 981.1 565 82.8
AUR62015201 Chenopodium quinoa HOM05D003778 ORTHO05D004418 6.1e-284 980.3 549 84.0
AL3G33330 Arabidopsis lyrata HOM05D003778 ORTHO05D004418 1.0e-283 979.5 565 82.8
Carub.0003s1970 Capsella rubella HOM05D003778 ORTHO05D004418 2.3e-283 978.4 565 82.1
Sopen02g009490 Solanum pennellii HOM05D003778 ORTHO05D004418 4.0e-283 977.6 551 83.5
FAN07G1289 Fragaria x ananassa HOM05D003778 ORTHO05D004418 8.8e-283 976.5 565 83.2
AT3G19820 Arabidopsis thaliana HOM05D003778 ORTHO05D004418 2.6e-282 974.9 565 82.7
Lj6g0014800 Lotus japonicus HOM05D003778 ORTHO05D004418 1.7e-281 972.2 563 82.4
CARHR095330 Cardamine hirsuta HOM05D003778 ORTHO05D004418 2.2e-281 971.8 565 81.9
ClCG07G016390 Citrullus lanatus HOM05D003778 ORTHO05D004418 3.7e-281 971.1 561 81.5
BraA06t23537Z Brassica rapa HOM05D003778 ORTHO05D004418 8.3e-281 969.9 565 81.8
A06p03260 Brassica napus HOM05D003778 ORTHO05D004418 1.4e-280 969.1 565 81.8
FvH4_4g36730 Fragaria vesca HOM05D003778 ORTHO05D004418 4.1e-280 967.6 565 82.5
Sp1g37100 Schrenkiella parvula HOM05D003778 ORTHO05D004418 4.1e-280 967.6 565 81.8
THA.LOC104815230 Tarenaya hassleriana HOM05D003778 ORTHO05D004418 4.1e-280 967.6 565 81.2
FAN12G0530 Fragaria x ananassa HOM05D003778 ORTHO05D004418 9.2e-280 966.5 565 82.3
CsaV3_4G009240 Cucumis sativus L. HOM05D003778 ORTHO05D004418 1.2e-279 966.1 561 80.6
Solyc02g030170.4 Solanum lycopersicum HOM05D003778 ORTHO05D004418 2.3e-278 961.8 534 84.3
BolC6t35641H Brassica oleracea HOM05D003778 ORTHO05D004418 8.6e-278 959.9 565 81.1
Lj6g0026630 Lotus japonicus HOM05D003778 ORTHO05D004418 7.3e-277 956.8 560 81.6
EL10Ac9g22920 Beta vulgaris HOM05D003778 ORTHO05D004418 2.1e-276 955.3 565 80.5
Os10g0397400 Oryza sativa ssp. japonica HOM05D003778 ORTHO05D004418 1.0e-275 953.0 563 80.8
Zm00001eb228910 Zea mays HOM05D003778 ORTHO05D004418 8.9e-275 949.9 564 80.5
Nitab4.5_0001219g0170 Nicotiana tabacum HOM05D003778 ORTHO05D004418 7.5e-274 946.8 563 79.8
Nitab4.5_0008761g0020 Nicotiana tabacum HOM05D003778 ORTHO05D004418 1.4e-272 942.6 563 80.1
Sed0007506 Sechium edule HOM05D003778 ORTHO05D004418 2.4e-272 941.8 561 78.4
FAN17G2175 Fragaria x ananassa HOM05D003778 ORTHO05D004418 5.0e-270 934.1 563 81.5
Peaxi162Scf00833g00024 Petunia axillaris HOM05D003778 ORTHO05D004418 4.3e-269 931.0 563 78.5
Solyc02g069490.4 Solanum lycopersicum HOM05D003778 ORTHO05D004418 5.2e-267 924.1 564 77.7
Sopen02g018630 Solanum pennellii HOM05D003778 ORTHO05D004418 2.0e-266 922.2 554 78.5
PGSC0003DMG400021142 Solanum tuberosum HOM05D003778 ORTHO05D004418 7.5e-266 920.2 554 78.2
CAN.G675.20 Capsicum annuum HOM05D003778 ORTHO05D004418 2.9e-265 918.3 553 78.3
SMO367G0245 Selaginella moellendorffii HOM05D003778 ORTHO05D004418 1.6e-263 912.5 552 77.9
BcaC08g43211 Brassica carinata HOM05D003778 ORTHO05D004418 1.9e-261 905.6 565 77.5
C06p05320 Brassica napus HOM05D003778 ORTHO05D004418 5.6e-261 904.0 524 81.5
CAN.G1362.14 Capsicum annuum HOM05D003778 ORTHO05D004418 9.5e-261 903.3 564 74.8
Pp3c7_650 Physcomitrium patens HOM05D003778 ORTHO05D004418 7.5e-258 893.6 561 76.3
HanXRQChr15g0483641 Helianthus annuus HOM05D003778 ORTHO05D004418 6.4e-257 890.6 570 73.5
AagrBONN_evm.TU.Sc2ySwM_117.797 Anthoceros agrestis HOM05D003778 ORTHO05D004418 1.6e-255 885.9 555 75.0
unitig_748.g7356 Utricularia gibba HOM05D003778 ORTHO05D004418 1.0e-254 883.2 557 78.5
Mapoly0190s0010 Marchantia polymorpha HOM05D003778 ORTHO05D004418 3.9e-254 881.3 561 75.6
Lsat_1_v5_gn_3_32901 Lactuca sativa HOM05D003778 ORTHO05D004418 5.2e-251 870.9 551 74.4
Pp3c11_26120 Physcomitrium patens HOM05D003778 ORTHO05D004418 9.6e-245 850.1 561 72.7
Peaxi162Scf00695g00218 Petunia axillaris HOM05D003778 ORTHO05D004418 6.2e-244 847.4 564 72.3
Peaxi162Scf00312g00221 Petunia axillaris HOM05D003778 ORTHO05D004418 5.2e-243 844.3 564 72.5
MELO3C022613.2 Cucumis melo HOM05D003778 ORTHO05D004418 5.6e-237 824.3 466 81.5
Glyma.12G028300 Glycine max HOM05D003778 ORTHO05D004418 1.0e-222 776.9 418 89.2
AUR62018172 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.1e-208 730.3 425 80.5
GSVIVG01010184001 Vitis vinifera HOM05D003778 ORTHO05D004418 1.4e-208 729.9 564 65.4
Oeu008711.1 Olea europaea HOM05D003778 ORTHO05D004418 7.4e-205 717.6 563 63.9
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 3.1e-187 659.1 373 81.0
Mapoly0153s0024 Marchantia polymorpha HOM05D003778 ORTHO05D004418 1.1e-176 624.0 542 54.8
AagrBONN_evm.TU.Sc2ySwM_344.4140 Anthoceros agrestis HOM05D003778 ORTHO05D004418 1.0e-166 590.9 488 55.3
vmacro10903 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 1.0e-166 590.9 417 71.0
CDE05G2099 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 4.4e-165 585.5 330 81.5
SEGI_20352 Sequoiadendron giganteum HOM05D003778 ORTHO05D004418 5.6e-160 568.5 523 51.2
Nn4g24924 Nelumbo nucifera HOM05D003778 ORTHO05D004418 1.1e-155 554.3 293 85.3
SMO347G0448 Selaginella moellendorffii HOM05D003778 ORTHO05D004418 8.9e-150 534.6 418 58.9
Nitab4.5_0012697g0010 Nicotiana tabacum HOM05D003778 ORTHO05D004418 4.3e-136 489.2 552 50.4
Nitab4.5_0000876g0110 Nicotiana tabacum HOM05D003778 ORTHO05D004418 6.2e-135 485.3 564 49.6
CDE05G1908 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 9.6e-128 461.5 469 54.8
Zm00001eb190720 Zea mays HOM05D003778 ORTHO05D004418 3.1e-126 456.4 318 68.9
C06p05360 Brassica napus HOM05D003778 ORTHO05D004418 3.7e-87 326.6 549 38.3
Thhalv10012112m.g Eutrema salsugineum HOM05D003778 ORTHO05D004418 2.6e-85 320.5 211 73.9
CBR_g45591 Chara braunii HOM05D003778 ORTHO05D004418 2.3e-81 307.4 492 36.2
BcaC08g43207 Brassica carinata HOM05D003778 ORTHO05D004418 4.2e-67 260.0 198 63.6
BolC6t35639H Brassica oleracea HOM05D003778 ORTHO05D004418 8.8e-65 252.3 198 61.6
BcaB04g19062 Brassica carinata HOM05D003778 ORTHO05D004418 4.8e-63 246.5 166 69.9
GSVIVG01028580001 Vitis vinifera HOM05D003778 ORTHO05D004418 6.1e-50 203.0 133 76.7
vmacro10902 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 4.0e-49 200.3 118 82.2
GSVIVG01002973001 Vitis vinifera HOM05D003778 ORTHO05D004418 1.5e-48 198.4 128 78.1
Zm00001eb190730 Zea mays HOM05D003778 ORTHO05D004418 1.4e-46 191.8 127 70.1
C03p50700 Brassica napus HOM05D003778 ORTHO05D004418 1.9e-43 181.4 166 60.2
C03p50680 Brassica napus HOM05D003778 ORTHO05D004418 7.3e-43 179.5 166 60.2
BolC3t17357H Brassica oleracea HOM05D003778 ORTHO05D004418 1.2e-42 178.7 166 60.2
BolC3t17355H Brassica oleracea HOM05D003778 ORTHO05D004418 1.4e-41 175.3 166 59.6
Cfa024211 Carpinus fangiana HOM05D003778 ORTHO05D004418 6.4e-39 166.4 322 32.3
Cfa023151 Carpinus fangiana HOM05D003778 ORTHO05D004418 6.8e-33 146.4 495 26.5
Gorai.005G150900 Gossypium raimondii HOM05D003778 ORTHO05D004418 1.7e-31 141.7 87 71.3
HanXRQChr08g0230901 Helianthus annuus HOM05D003778 ORTHO05D004418 1.0e-28 132.5 76 75.0
GSVIVG01033182001 Vitis vinifera HOM05D003778 ORTHO05D008307 7.3e-27 126.3 85 63.5
A03p41410 Brassica napus HOM05D003778 ORTHO05D004418 3.6e-26 124.0 213 38.5
PGSC0003DMG400004305 Solanum tuberosum HOM05D003778 ORTHO05D004418 4.7e-26 123.6 89 67.4
BcaC01g03602 Brassica carinata HOM05D003778 ORTHO05D004418 2.3e-20 104.8 181 39.8
C06p05290 Brassica napus HOM05D003778 ORTHO05D033430 6.6e-20 103.2 103 48.5
A03p41420 Brassica napus HOM05D003778 ORTHO05D004418 8.6e-20 102.8 166 42.2
BraA03t13295Z Brassica rapa HOM05D003778 ORTHO05D004418 1.1e-09 69.3 46 63.0
Psat0s3488g0080 Pisum sativum HOM05D002270 ORTHO05D030496 2.4e-06 58.2 40 77.5


User provided reference genes

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