Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 2.0e-94 349.0 167 100.0
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 1.5e-41 173.3 165 51.5
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 3.8e-40 168.7 166 51.2
PSO017G1253 Papaver somniferum HOM05D003575 ORTHO05D003587 6.5e-40 167.9 163 52.1
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 1.1e-39 167.2 166 50.6
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 1.4e-39 166.8 166 50.6
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 1.9e-39 166.4 166 50.0
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 2.5e-39 166.0 165 52.1
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 1.6e-38 163.3 166 50.0
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 1.6e-38 163.3 165 51.5
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 4.6e-38 161.8 166 50.0
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 1.0e-37 160.6 165 50.9
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 1.0e-37 160.6 165 50.9
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 1.8e-34 149.8 165 47.9
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 7.2e-31 137.9 166 44.6
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 1.2e-30 137.1 166 44.6
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 6.7e-29 131.3 164 43.3
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 5.3e-26 121.7 164 38.4
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 8.5e-24 114.4 167 37.1
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 3.0e-21 105.9 164 35.4
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 2.6e-20 102.8 167 35.9
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 9.7e-20 100.9 164 35.4
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 9.7e-20 100.9 166 35.5
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 1.7e-19 100.1 161 37.3
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 1.7e-19 100.1 162 35.2
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 2.8e-19 99.4 166 31.9
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 4.8e-19 98.6 164 34.8
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 4.8e-19 98.6 162 34.6
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 6.3e-19 98.2 138 37.0
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 6.3e-19 98.2 166 38.0
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 1.4e-18 97.1 140 37.9
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 2.4e-18 96.3 165 35.2
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 2.4e-18 96.3 161 33.5
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 2.4e-18 96.3 161 33.5
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 2.4e-18 96.3 161 33.5
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 3.1e-18 95.9 160 36.2
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 7.0e-18 94.7 164 37.2
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 7.0e-18 94.7 159 37.7
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 9.1e-18 94.4 165 33.3
PSO339G3010 Papaver somniferum HOM05D003575 ORTHO05D003587 1.2e-17 94.0 100 53.0
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 1.2e-17 94.0 162 33.3
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 1.6e-17 93.6 163 29.4
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 1.6e-17 93.6 161 35.4
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 1.6e-17 93.6 164 36.6
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 2.0e-17 93.2 156 36.5
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 2.6e-17 92.8 161 34.2
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 2.6e-17 92.8 166 34.3
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 4.5e-17 92.0 158 35.4
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 4.5e-17 92.0 161 34.2
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 5.9e-17 91.7 167 32.9
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 7.7e-17 91.3 158 35.4
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 7.7e-17 91.3 158 35.4
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 7.7e-17 91.3 161 35.4
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 1.0e-16 90.9 136 33.8
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 1.3e-16 90.5 160 36.9
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 1.3e-16 90.5 166 30.7
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.9e-16 89.4 167 33.5
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.9e-16 89.4 167 33.5
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 3.8e-16 89.0 166 31.9
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 3.8e-16 89.0 166 34.9
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 6.5e-16 88.2 141 34.8
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 6.5e-16 88.2 173 32.4
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 8.5e-16 87.8 153 34.6
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 8.5e-16 87.8 175 31.4
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 1.1e-15 87.4 167 32.9
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 1.1e-15 87.4 132 34.8
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.5e-15 87.0 165 32.7
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 1.5e-15 87.0 175 31.4
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 1.5e-15 87.0 165 31.5
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 1.9e-15 86.7 142 33.1
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.9e-15 86.7 138 37.0
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 2.5e-15 86.3 167 32.9
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 2.5e-15 86.3 165 32.1
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 2.5e-15 86.3 162 32.1
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 3.2e-15 85.9 167 32.9
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 5.5e-15 85.1 175 31.4
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 7.2e-15 84.7 165 31.5
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 7.2e-15 84.7 166 34.9
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 9.4e-15 84.3 165 31.5
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 9.4e-15 84.3 160 31.9
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 9.4e-15 84.3 167 32.9
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 1.2e-14 84.0 143 34.3
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.2e-14 84.0 165 31.5
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 1.6e-14 83.6 154 31.8
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 1.6e-14 83.6 172 32.6
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 2.1e-14 83.2 149 32.9
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 2.1e-14 83.2 165 29.7
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 2.1e-14 83.2 145 32.4
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 2.1e-14 83.2 182 34.1
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 2.7e-14 82.8 165 30.9
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 2.7e-14 82.8 162 34.0
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 3.6e-14 82.4 145 35.2
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 6.1e-14 81.6 145 33.8
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 6.1e-14 81.6 125 38.4
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 8.0e-14 81.3 167 31.7
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 8.0e-14 81.3 103 35.9
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 8.0e-14 81.3 165 29.1
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 1.0e-13 80.9 145 33.8
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.0e-13 80.9 173 31.2
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 1.4e-13 80.5 143 35.7
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 1.8e-13 80.1 165 30.3
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 1.8e-13 80.1 167 30.5
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 1.8e-13 80.1 153 31.4
Sp7g23350 Schrenkiella parvula HOM05D003575 ORTHO05D003587 1.8e-13 80.1 171 33.3
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 2.3e-13 79.7 145 33.8
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 2.3e-13 79.7 145 33.8
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 3.0e-13 79.3 165 30.3
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 3.0e-13 79.3 165 28.5
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 3.0e-13 79.3 160 32.5
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 4.0e-13 79.0 153 32.7
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 5.2e-13 78.6 136 30.1
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.7e-13 78.2 168 32.1
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 8.8e-13 77.8 168 32.1
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 1.5e-12 77.0 164 29.9
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 1.5e-12 77.0 173 30.1
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.5e-12 77.0 173 30.1
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 1.5e-12 77.0 162 29.6
Pp3c24_6860 Physcomitrium patens HOM05D003575 ORTHO05D003587 2.6e-12 76.3 152 28.3
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 5.7e-12 75.1 143 30.8
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 5.7e-12 75.1 172 29.7
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 5.7e-12 75.1 143 30.8
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 9.7e-12 74.3 148 31.1
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 1.3e-11 73.9 149 30.2
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.8e-11 72.8 203 27.6
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 2.8e-11 72.8 166 30.1
Mapoly0021s0099 Marchantia polymorpha HOM05D003575 ORTHO05D003587 8.2e-11 71.2 151 29.8
Mapoly0033s0032 Marchantia polymorpha HOM05D003575 ORTHO05D003587 1.1e-10 70.9 128 35.2
PGSC0003DMG400017442 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.8e-10 70.1 161 28.6
Peaxi162Scf00802g00028 Petunia axillaris HOM05D003575 ORTHO05D003587 2.4e-10 69.7 157 28.0
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 7.0e-10 68.2 166 28.9
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 9.1e-10 67.8 114 30.7
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 1.2e-09 67.4 100 41.0
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 2.7e-09 66.2 174 32.2
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 2.7e-09 66.2 101 39.6
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 1.3e-08 63.9 143 29.4
Cc00_g01030 Coffea canephora HOM05D003575 ORTHO05D003587 6.5e-08 61.6 97 37.1
Os05g0386400 Oryza sativa ssp. japonica HOM05D003575 ORTHO05D003587 8.5e-08 61.2 128 28.9
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 8.5e-08 61.2 97 40.2
Lsat_1_v5_gn_8_78381 Lactuca sativa HOM05D003575 ORTHO05D003587 3.2e-07 59.3 95 28.4
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 5.5e-07 58.5 119 33.6
Mapoly0066s0003 Marchantia polymorpha HOM05D040683 ORTHO05D003587 9.4e-07 57.8 132 29.5
Mapoly0072s0063 Marchantia polymorpha HOM05D040683 ORTHO05D003587 1.6e-06 57.0 138 28.3
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 3.6e-06 55.8 81 39.5


User provided reference genes

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