Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4787 Papaver somniferum HOM05D005031 ORTHO05D006098 3.5e-89 331.6 174 100.0
PSO478G0084 Papaver somniferum HOM05D005031 ORTHO05D006098 1.9e-87 325.9 174 98.3
PSO675G4517 Papaver somniferum HOM05D005031 ORTHO05D006098 2.6e-84 315.5 174 94.8
Nn8g40193 Nelumbo nucifera HOM05D005031 ORTHO05D006098 4.3e-71 271.6 174 77.0
TWI73G0469 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 6.3e-70 267.7 174 76.4
Hund18050 Selenicereus undatus HOM05D005031 ORTHO05D006098 2.4e-69 265.8 174 75.9
Thecc.09G157500 Theobroma cacao HOM05D005031 ORTHO05D006098 2.4e-69 265.8 174 77.0
Gohir.D08G098400 Gossypium hirsutum HOM05D005031 ORTHO05D006098 6.9e-69 264.2 174 76.4
Gorai.004G106100 Gossypium raimondii HOM05D005031 ORTHO05D006098 2.6e-68 262.3 174 75.9
arahy.Tifrunner.gnm1.ann1.QFVN2V Arachis hypogaea HOM05D005031 ORTHO05D006098 4.5e-68 261.5 174 75.9
Gohir.A08G087500 Gossypium hirsutum HOM05D005031 ORTHO05D006098 4.5e-68 261.5 174 75.3
Duzib187G1655 Durio zibethinus HOM05D005031 ORTHO05D006098 5.9e-68 261.2 174 75.3
Potri.018G101100 Populus trichocarpa HOM05D005031 ORTHO05D006098 5.9e-68 261.2 174 76.4
Duzib168G1565 Durio zibethinus HOM05D005031 ORTHO05D006098 7.6e-68 260.8 174 75.9
EL10Ac7g17961 Beta vulgaris HOM05D005031 ORTHO05D006098 1.0e-67 260.4 174 73.0
Duzib187G0728 Durio zibethinus HOM05D005031 ORTHO05D006098 1.7e-67 259.6 174 74.7
VMungo1215G0734 Vigna mungo HOM05D005031 ORTHO05D006098 2.2e-67 259.2 174 74.1
ATR0580G158 Amborella trichopoda HOM05D005031 ORTHO05D006098 3.8e-67 258.5 174 73.6
TPR.G1244 Trifolium pratense HOM05D005031 ORTHO05D006098 5.0e-67 258.1 174 74.1
GSVIVG01033204001 Vitis vinifera HOM05D005031 ORTHO05D006098 6.5e-67 257.7 174 72.4
Ca_21160_v3 Cicer arietinum L. HOM05D005031 ORTHO05D006098 8.5e-67 257.3 174 73.6
Glyma.02G207700 Glycine max HOM05D005031 ORTHO05D006098 8.5e-67 257.3 174 73.6
FvH4_3g25860 Fragaria vesca HOM05D005031 ORTHO05D006098 1.4e-66 256.5 174 73.0
FAN11G2096 Fragaria x ananassa HOM05D005031 ORTHO05D006098 1.4e-66 256.5 174 73.0
FAN21G1649 Fragaria x ananassa HOM05D005031 ORTHO05D006098 1.4e-66 256.5 174 73.6
MD00G1059200 Malus domestica HOM05D005031 ORTHO05D006098 1.4e-66 256.5 174 74.7
Phvul.010G125500 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 1.4e-66 256.5 174 73.0
Glyma.17G070000 Glycine max HOM05D005031 ORTHO05D006098 2.5e-66 255.8 174 73.0
Phvul.003G152700 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 2.5e-66 255.8 174 73.0
THA.LOC104819960 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 2.5e-66 255.8 174 71.8
COL.COLO4_10074 Corchorus olitorius HOM05D005031 ORTHO05D006098 5.5e-66 254.6 174 74.7
THA.LOC104803530 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 5.5e-66 254.6 174 72.4
TAR636G0261 Trochodendron aralioides HOM05D005031 ORTHO05D006098 5.5e-66 254.6 171 73.7
RcHm_v2.0_Chr5g0047191 Rosa chinensis HOM05D005031 ORTHO05D006098 7.2e-66 254.2 174 73.0
Prupe.1G100400 Prunus persica HOM05D005031 ORTHO05D006098 9.3e-66 253.8 174 73.0
MD00G1091200 Malus domestica HOM05D005031 ORTHO05D006098 1.2e-65 253.4 174 73.6
CsaV3_2G007780 Cucumis sativus L. HOM05D005031 ORTHO05D006098 1.6e-65 253.1 174 73.0
RcHm_v2.0_Chr4g0405231 Rosa chinensis HOM05D005031 ORTHO05D006098 1.6e-65 253.1 174 72.4
Lj6g0018969 Lotus japonicus HOM05D005031 ORTHO05D006098 2.1e-65 252.7 174 71.8
Medtr4g130180 Medicago truncatula HOM05D005031 ORTHO05D006098 2.1e-65 252.7 174 72.4
Sp7g28380 Schrenkiella parvula HOM05D005031 ORTHO05D006098 2.7e-65 252.3 174 73.0
Eucgr.H00166 Eucalyptus grandis HOM05D005031 ORTHO05D006098 3.6e-65 251.9 174 73.0
Thhalv10026393m.g Eutrema salsugineum HOM05D005031 ORTHO05D006098 4.6e-65 251.5 174 71.8
FAN25G2017 Fragaria x ananassa HOM05D005031 ORTHO05D006098 4.6e-65 251.5 174 72.4
Peaxi162Scf00038g00324 Petunia axillaris HOM05D005031 ORTHO05D006098 7.9e-65 250.8 174 74.1
CANSAT11G2524 Cannabis sativa HOM05D005031 ORTHO05D006098 1.3e-64 250.0 174 73.6
Ciclev10012924m.g Citrus clementina HOM05D005031 ORTHO05D006098 1.3e-64 250.0 174 73.0
Sed0023985 Sechium edule HOM05D005031 ORTHO05D006098 1.3e-64 250.0 174 73.0
BcaNung00560 Brassica carinata HOM05D005031 ORTHO05D006098 1.8e-64 249.6 174 71.8
BcaNung00561 Brassica carinata HOM05D005031 ORTHO05D006098 1.8e-64 249.6 174 71.8
C07p57970 Brassica napus HOM05D005031 ORTHO05D006098 1.8e-64 249.6 174 71.8
BolC7t46255H Brassica oleracea HOM05D005031 ORTHO05D006098 1.8e-64 249.6 174 71.8
CAN.G1190.6 Capsicum annuum HOM05D005031 ORTHO05D006098 1.8e-64 249.6 174 73.6
A03p59910 Brassica napus HOM05D005031 ORTHO05D006098 2.3e-64 249.2 174 71.8
CDE05G2574 Ceratophyllum demersum HOM05D005031 ORTHO05D006098 3.0e-64 248.8 174 69.0
AL7G21640 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 3.9e-64 248.4 174 72.4
BraA03t15048Z Brassica rapa HOM05D005031 ORTHO05D006098 5.1e-64 248.1 174 71.3
Lalb_Chr07g0180011 Lupinus albus HOM05D005031 ORTHO05D006098 6.7e-64 247.7 175 73.1
AT2G23940 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 1.5e-63 246.5 174 70.7
Oeu031856.2 Olea europaea HOM05D005031 ORTHO05D006098 2.5e-63 245.7 174 70.7
Aqoxy5G00990 Aquilegia oxysepala HOM05D005031 ORTHO05D006098 3.3e-63 245.4 171 71.9
AL4G13970 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 3.3e-63 245.4 174 70.7
Hma1.2p1_2290F.1_g319050 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 3.3e-63 245.4 174 70.7
Manes.06G033000 Manihot esculenta HOM05D005031 ORTHO05D006098 3.3e-63 245.4 174 73.6
Aa31LG2G20010 Aethionema arabicum HOM05D005031 ORTHO05D006098 7.4e-63 244.2 174 71.3
C01p08550 Brassica napus HOM05D005031 ORTHO05D006098 7.4e-63 244.2 174 70.1
Oeu045637.1 Olea europaea HOM05D005031 ORTHO05D006098 9.7e-63 243.8 174 70.7
arahy.Tifrunner.gnm1.ann1.0TL0BP Arachis hypogaea HOM05D005031 ORTHO05D006098 1.7e-62 243.0 198 65.7
Carub.0004s0310 Capsella rubella HOM05D005031 ORTHO05D006098 1.7e-62 243.0 174 70.1
MELO3C004109.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.7e-62 243.0 174 71.3
ClCG11G012690 Citrullus lanatus HOM05D005031 ORTHO05D006098 3.7e-62 241.9 174 72.4
PGR031G2537 Punica granatum HOM05D005031 ORTHO05D006098 8.2e-62 240.7 174 69.5
Sabra18G0087000 Salix brachista HOM05D005031 ORTHO05D006098 1.1e-61 240.4 194 65.5
Hma1.2p1_1493F.1_g286836 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 1.4e-61 240.0 174 68.4
Lj4g0007960 Lotus japonicus HOM05D005031 ORTHO05D006098 2.4e-61 239.2 175 69.7
CARHR184610 Cardamine hirsuta HOM05D005031 ORTHO05D006098 3.1e-61 238.8 171 70.2
BcaC09g51840 Brassica carinata HOM05D005031 ORTHO05D006098 4.1e-61 238.4 174 69.0
A01p07680 Brassica napus HOM05D005031 ORTHO05D006098 5.3e-61 238.0 174 68.4
HPP92_025776 Vanilla planifolia HOM05D005031 ORTHO05D006098 5.3e-61 238.0 174 69.0
BraA01t00711Z Brassica rapa HOM05D005031 ORTHO05D006098 6.9e-61 237.7 173 68.2
CiPaw.06G050600 Carya illinoinensis HOM05D005031 ORTHO05D006098 6.9e-61 237.7 174 67.8
TWI23G1034 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 6.9e-61 237.7 158 74.7
AT4G30500 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 9.1e-61 237.3 174 69.0
BolC1t00837H Brassica oleracea HOM05D005031 ORTHO05D006098 2.0e-60 236.1 164 71.3
Zm00001eb186920 Zea mays HOM05D005031 ORTHO05D006098 5.9e-60 234.6 175 68.6
BolC1t00831H Brassica oleracea HOM05D005031 ORTHO05D006098 7.7e-60 234.2 164 70.7
PGSC0003DMG400011218 Solanum tuberosum HOM05D005031 ORTHO05D006098 1.7e-59 233.0 174 70.7
Solyc07g006150.3 Solanum lycopersicum HOM05D005031 ORTHO05D006098 2.2e-59 232.6 174 70.7
Sopen07g002260 Solanum pennellii HOM05D005031 ORTHO05D006098 2.2e-59 232.6 174 70.7
Nitab4.5_0001036g0100 Nicotiana tabacum HOM05D005031 ORTHO05D006098 3.8e-59 231.9 174 70.1
Nitab4.5_0002545g0040 Nicotiana tabacum HOM05D005031 ORTHO05D006098 4.2e-58 228.4 174 69.0
ECA234G3840 Erigeron canadensis HOM05D005031 ORTHO05D006098 1.8e-56 223.0 174 66.1
MBI14_g16418_MAGBIO Magnolia biondii HOM05D005031 ORTHO05D006098 1.8e-56 223.0 146 76.0
Atru.chr12.1707 Acer truncatum HOM05D005031 ORTHO05D006098 2.3e-56 222.6 174 65.5
Hma1.2p1_2438F.1_g322190 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 3.9e-56 221.9 156 69.2
BolC1t00834H Brassica oleracea HOM05D005031 ORTHO05D006098 5.7e-55 218.0 151 70.2
vmacro01000 Vaccinium macrocarpon HOM05D005031 ORTHO05D006098 1.3e-54 216.9 174 64.4
SGA_v2.0_scaffold12G06032 Striga asiatica HOM05D005031 ORTHO05D006098 2.8e-54 215.7 174 64.4
Atru.chr12.1715 Acer truncatum HOM05D005031 ORTHO05D006098 1.1e-53 213.8 143 72.0
QL01p011713 Quercus lobata HOM05D005031 ORTHO05D006098 5.3e-53 211.5 173 61.3
SalBow1G8617 Salvia bowleyana HOM05D005031 ORTHO05D006098 6.9e-53 211.1 174 63.2
Cc06_g14310 Coffea canephora HOM05D005031 ORTHO05D006098 1.0e-51 207.2 174 63.8
HanXRQChr10g0307831 Helianthus annuus HOM05D005031 ORTHO05D006098 1.0e-51 207.2 174 60.9
Sed0023066 Sechium edule HOM05D005031 ORTHO05D006098 1.3e-51 206.8 151 70.9
Migut.K00291 Erythranthe guttata HOM05D005031 ORTHO05D006098 2.9e-51 205.7 174 60.9
Dinv41325 Davidia involucrata HOM05D005031 ORTHO05D006098 6.5e-51 204.5 174 60.3
Rhsim03G0261100 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.9e-50 203.0 196 57.1
Actinidia33308 Actinidia chinensis HOM05D005031 ORTHO05D006098 2.7e-49 199.1 174 60.9
Actinidia38656 Actinidia chinensis HOM05D005031 ORTHO05D006098 4.7e-49 198.4 174 59.8
MSTRG.10716 Avicennia marina HOM05D005031 ORTHO05D006098 1.0e-48 197.2 174 58.6
CSS0024126 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 1.4e-48 196.8 172 58.1
CSS0012616 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 1.8e-48 196.4 172 58.1
Sc05g0001840 Simmondsia chinensis HOM05D005031 ORTHO05D006098 3.3e-47 192.2 122 73.0
Psat0s2826g0160 Pisum sativum HOM05D005031 ORTHO05D006098 5.7e-47 191.4 122 73.0
Os02g0666800 Oryza sativa ssp. japonica HOM05D005031 ORTHO05D006098 4.8e-46 188.3 175 56.0
Lsat_1_v5_gn_5_88201 Lactuca sativa HOM05D005031 ORTHO05D006098 6.3e-46 188.0 176 57.4
SMO164G0234 Selaginella moellendorffii HOM05D005031 ORTHO05D006098 8.2e-46 187.6 175 60.0
Rhsim03G0260600 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.1e-45 187.2 239 46.9
AagrBONN_evm.TU.Sc2ySwM_368.3216 Anthoceros agrestis HOM05D005031 ORTHO05D006098 3.1e-45 185.7 171 57.9
Mapoly0003s0226 Marchantia polymorpha HOM05D005031 ORTHO05D006098 7.0e-45 184.5 174 55.2
Hma1.2p1_2725F.1_g327560 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 4.5e-44 181.8 122 70.5
AUR62001168 Chenopodium quinoa HOM05D005031 ORTHO05D006098 5.5e-42 174.9 182 52.7
CBR_g3690 Chara braunii HOM05D005031 ORTHO05D006098 4.0e-40 168.7 173 50.3
Pp3c11_17250 Physcomitrium patens HOM05D005031 ORTHO05D006098 1.2e-39 167.2 173 55.5
Ah.08g218880 Amaranthus hybridus HOM05D005031 ORTHO05D006098 2.1e-33 146.4 94 70.2
Haze_21256 Corylus avellana HOM05D005031 ORTHO05D006098 2.1e-33 146.4 95 71.6
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 2.0e-31 139.8 94 66.0
Cpa.g.sc743.3 Carica papaya HOM05D005031 ORTHO05D006098 1.4e-29 133.7 92 68.5
BcaNung01743 Brassica carinata HOM05D005031 ORTHO05D006098 5.0e-27 125.2 85 70.6
BcaB08g34788 Brassica carinata HOM05D005031 ORTHO05D006098 5.2e-24 115.2 127 53.5
CARHR238390 Cardamine hirsuta HOM05D005031 ORTHO05D006098 6.3e-22 108.2 96 52.1
BcaB04g19089 Brassica carinata HOM05D005031 ORTHO05D006098 8.3e-22 107.8 122 53.3
Cre02.g096850 Chlamydomonas reinhardtii HOM05D005031 ORTHO05D006098 2.4e-21 106.3 168 38.1
unitig_62.g23488 Utricularia gibba HOM05D005031 ORTHO05D006098 2.7e-20 102.8 85 63.5
Lj7A465G52 Lonicera japonica HOM05D005031 ORTHO05D006098 2.9e-19 99.4 67 65.7
MELO3C020438.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.5e-18 97.1 55 78.2
MELO3C010414.2 Cucumis melo HOM05D005031 ORTHO05D006098 2.1e-17 93.2 53 79.2
PRCOL_00004780 Prasinoderma coloniale HOM05D005031 ORTHO05D006098 1.0e-16 90.9 129 37.2
MELO3C032992.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.8e-16 90.1 48 85.4
MCO15G043 Micromonas commoda HOM05D005031 ORTHO05D006098 1.3e-14 84.0 173 34.1
Rhsim03G0261000 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.7e-11 73.6 76 52.6
MELO3C033057.2 Cucumis melo HOM05D005031 ORTHO05D006098 3.0e-11 72.8 38 81.6


User provided reference genes

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