Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 0.0e+00 1469.1 792 100.0
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 0.0e+00 1321.2 792 91.3
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 0.0e+00 1228.0 807 85.3
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 0.0e+00 1216.1 789 86.1
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 8.6e-268 927.2 818 66.4
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.6e-266 922.9 818 66.3
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 2.9e-263 912.1 827 64.4
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 4.3e-259 898.3 862 60.2
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 8.4e-255 884.0 837 60.5
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 8.4e-255 884.0 809 62.1
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 3.3e-251 872.1 827 61.8
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 3.4e-248 862.1 761 65.3
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 4.2e-246 855.1 822 61.7
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 7.1e-246 854.4 833 58.8
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 2.1e-245 852.8 818 59.2
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 1.0e-244 850.5 820 58.9
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 1.9e-243 846.3 815 61.2
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 4.3e-243 845.1 787 61.1
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 2.8e-242 842.4 822 58.6
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 2.8e-242 842.4 819 59.3
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 3.7e-242 842.0 820 59.5
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 1.4e-241 840.1 855 57.1
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.4e-241 840.1 806 59.3
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 2.4e-241 839.3 814 59.8
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 3.1e-241 839.0 813 60.3
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 7.6e-240 834.3 838 58.9
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 1.3e-239 833.6 803 59.4
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 8.4e-239 830.9 824 59.2
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 1.1e-238 830.5 826 58.4
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 1.4e-238 830.1 812 59.0
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 5.5e-238 828.2 832 57.3
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 9.3e-238 827.4 805 59.8
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.2e-237 827.0 834 58.2
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 3.5e-237 825.5 833 58.8
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 1.3e-234 817.0 798 58.3
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.6e-234 816.6 806 59.9
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 2.8e-234 815.8 822 58.2
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 8.2e-234 814.3 829 58.3
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 3.1e-233 812.4 820 57.9
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 5.3e-233 811.6 797 60.6
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.2e-232 810.4 837 58.1
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 1.5e-232 810.1 803 57.3
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 3.4e-232 808.9 842 56.8
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 4.5e-232 808.5 808 58.9
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 5.9e-232 808.1 807 59.1
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 7.6e-232 807.7 823 56.3
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 2.5e-230 802.7 789 58.3
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 4.2e-230 802.0 798 57.8
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 4.2e-230 802.0 823 57.0
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 9.3e-230 800.8 824 57.6
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 1.2e-229 800.4 817 56.9
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 2.7e-229 799.3 811 56.1
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 6.1e-229 798.1 813 56.1
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 7.9e-229 797.7 801 57.6
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 8.7e-228 794.3 830 56.1
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 1.9e-227 793.1 827 57.3
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.9e-227 793.1 786 61.5
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 7.7e-224 781.2 810 56.5
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 5.0e-223 778.5 807 58.0
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 1.9e-222 776.5 812 57.3
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 4.2e-222 775.4 835 55.0
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 5.5e-222 775.0 813 55.4
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 9.4e-222 774.2 789 57.0
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 6.1e-221 771.5 812 55.8
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 3.0e-220 769.2 810 55.6
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 1.1e-219 767.3 820 55.0
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 4.3e-219 765.4 787 58.2
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 5.7e-219 765.0 797 58.1
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 1.3e-218 763.8 786 57.8
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 4.1e-217 758.8 799 57.9
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 5.3e-217 758.4 782 57.5
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 3.4e-216 755.7 761 58.5
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 5.9e-216 755.0 820 54.9
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 2.2e-215 753.1 832 54.2
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 3.0e-212 742.7 810 54.4
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 4.4e-211 738.8 882 52.5
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 5.7e-211 738.4 813 55.5
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 5.7e-211 738.4 803 53.5
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 2.8e-210 736.1 815 55.6
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 3.1e-209 732.6 789 55.5
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 3.5e-208 729.2 830 52.8
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.7e-207 726.9 810 53.3
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 6.5e-207 724.9 799 54.6
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 1.4e-201 707.2 743 56.0
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 7.5e-195 684.9 816 53.3
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.3e-194 684.1 773 54.7
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 1.1e-193 681.0 653 61.9
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 1.2e-189 667.5 808 51.9
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 4.7e-189 665.6 816 52.1
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.4e-188 664.1 793 51.2
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 8.8e-188 661.4 694 55.9
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 4.4e-187 659.1 820 52.0
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.7e-186 657.1 820 47.9
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 1.1e-185 654.4 817 52.0
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 1.4e-185 654.1 820 51.7
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.7e-183 647.1 814 51.4
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 3.6e-181 639.4 817 51.7
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 7.5e-179 631.7 820 50.2
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 1.3e-175 620.9 812 48.9
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 1.1e-174 617.8 812 49.8
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 4.7e-173 612.5 798 48.0
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 6.2e-173 612.1 815 50.2
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 5.8e-171 605.5 793 46.5
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.7e-170 604.0 922 43.1
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 8.3e-170 601.7 817 46.5
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 4.1e-169 599.4 793 46.5
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 7.0e-169 598.6 793 46.5
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 6.0e-168 595.5 805 48.4
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 2.5e-166 590.1 435 68.7
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 6.2e-157 558.9 829 43.2
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 1.4e-153 547.7 739 48.6
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 1.2e-152 544.7 587 58.6
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 6.6e-151 538.9 727 47.6
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 1.3e-138 498.0 692 46.2
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 2.7e-136 490.3 725 43.2
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 2.5e-134 483.8 660 50.2
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 5.6e-126 456.1 546 55.9
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 2.1e-125 454.1 316 74.4
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.0e-123 447.6 841 40.2
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 8.7e-119 432.2 875 37.8
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 7.4e-118 429.1 469 60.6
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 1.2e-115 421.8 526 52.7
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 5.5e-113 412.9 526 54.4
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 7.4e-110 402.5 348 60.9
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 4.1e-100 370.2 292 68.2
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 2.1e-96 357.8 434 53.2
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 2.4e-92 344.4 456 45.0
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.6e-91 341.7 276 64.1
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 7.7e-91 339.3 827 34.7
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 3.8e-90 337.0 550 41.6
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 4.4e-86 323.6 775 33.0
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.3e-85 322.0 524 42.7
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 4.5e-83 313.5 451 43.9
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 5.9e-83 313.2 893 31.8
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 8.5e-82 309.3 533 37.1
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 3.5e-59 234.2 773 29.0
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 1.8e-55 221.9 357 45.7
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.5e-49 201.4 193 61.1
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 2.2e-45 188.3 175 60.6
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 2.1e-43 181.8 396 38.1
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.7e-40 170.6 401 38.7
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 3.6e-32 144.4 145 49.0
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 2.0e-30 138.7 134 52.2
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 2.0e-30 138.7 134 59.0
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.6e-30 136.7 324 36.7
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.9e-29 134.0 304 39.1
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.9e-25 122.1 127 52.8
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.4e-23 115.2 127 52.0
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 3.2e-20 104.8 81 63.0
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 9.3e-20 103.2 102 56.9
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 4.6e-19 100.9 77 64.9
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.0e-18 99.8 228 36.0
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 1.3e-18 99.4 94 54.3
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.3e-18 98.6 267 32.6
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 2.1e-16 92.0 96 50.0
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.7e-16 91.3 275 34.2
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 6.2e-16 90.5 82 61.0
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 4.0e-15 87.8 69 63.8
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.0e-15 86.7 70 64.3
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.6e-14 85.1 140 44.3
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.2e-13 82.0 86 51.2
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.8e-13 81.3 329 30.4
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 8.4e-13 80.1 71 63.4
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.5e-12 77.4 80 51.2
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 7.1e-12 77.0 112 46.4
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 6.0e-11 73.9 62 62.9
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 1.8e-10 72.4 169 33.1
HPP92_027652 Vanilla planifolia HOM05D003551 ORTHO05D016818 5.1e-10 70.9 54 68.5
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 6.7e-10 70.5 90 51.1
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.7e-10 70.5 119 37.8
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.3e-08 66.2 161 36.6
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 2.1e-08 65.5 82 41.5
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 6.9e-07 60.5 48 66.7
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 2.0e-06 58.9 40 67.5
HPP92_028489 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.6e-06 58.5 54 59.3
HPP92_028374 Vanilla planifolia HOM05D003551 ORTHO05D016818 4.5e-06 57.8 102 40.2
Lalb_Chr05g0228661 Lupinus albus HOM05D003551 ORTHO05D048508 5.8e-06 57.4 134 32.8
HPP92_006873 Vanilla planifolia HOM05D000450 ORTHO05D002608 5.8e-06 57.4 115 40.0


User provided reference genes

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