Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 3.1e-70 268.5 145 100.0
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 2.3e-65 252.3 145 94.5
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 6.4e-36 154.5 130 63.1
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 6.0e-34 147.9 145 58.6
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 6.7e-33 144.4 133 59.4
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 1.9e-32 142.9 133 60.2
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 2.8e-31 139.0 142 56.3
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 9.0e-30 134.0 140 55.7
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 2.0e-29 132.9 96 67.7
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 2.6e-29 132.5 134 53.7
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 2.6e-29 132.5 119 58.0
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 3.4e-29 132.1 123 58.5
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 4.5e-29 131.7 132 53.8
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 9.9e-29 130.6 131 53.4
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 2.2e-28 129.4 134 53.0
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 2.9e-28 129.0 134 50.7
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 1.4e-27 126.7 123 57.7
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 1.9e-27 126.3 96 64.6
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 3.2e-27 125.6 100 65.0
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 7.1e-27 124.4 101 62.4
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 7.1e-27 124.4 108 62.0
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 9.3e-27 124.0 111 58.6
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 2.1e-26 122.9 101 59.4
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 3.5e-26 122.1 109 64.2
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 4.6e-26 121.7 139 48.9
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 4.6e-26 121.7 127 52.0
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 6.0e-26 121.3 127 54.3
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 7.9e-26 120.9 99 56.6
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 1.3e-25 120.2 125 52.8
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 1.8e-25 119.8 135 51.1
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 2.3e-25 119.4 121 53.7
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 2.3e-25 119.4 68 82.4
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 5.1e-25 118.2 130 55.4
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 6.7e-25 117.9 103 55.3
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 8.7e-25 117.5 107 54.2
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 8.7e-25 117.5 130 53.1
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 1.1e-24 117.1 111 52.3
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 1.9e-24 116.3 90 61.1
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 1.9e-24 116.3 90 61.1
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 1.9e-24 116.3 98 64.3
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 2.5e-24 115.9 90 61.1
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 5.6e-24 114.8 93 59.1
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 1.3e-23 113.6 89 59.6
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 3.7e-23 112.1 97 54.6
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 4.8e-23 111.7 99 51.5
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 6.2e-23 111.3 124 53.2
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 8.2e-23 110.9 123 49.6
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 1.4e-22 110.2 129 46.5
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 1.8e-22 109.8 101 58.4
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 2.6e-21 105.9 117 47.9
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 1.0e-20 104.0 108 52.8
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 1.3e-20 103.6 115 46.1
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 1.3e-20 103.6 72 69.4
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 4.9e-20 101.7 97 52.6
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 6.5e-20 101.3 92 54.3
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 4.2e-19 98.6 130 47.7
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 3.5e-18 95.5 79 58.2
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 7.9e-18 94.4 72 62.5
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 1.0e-17 94.0 69 66.7
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 1.0e-17 94.0 69 66.7
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 2.3e-17 92.8 68 67.6
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 3.0e-17 92.4 68 66.2
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 3.0e-17 92.4 65 69.2
Psat3g145480 Pisum sativum HOM05D007718 ORTHO05D009752 3.0e-17 92.4 87 55.2
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 3.9e-17 92.0 69 62.3
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 6.7e-17 91.3 109 45.0
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 6.7e-17 91.3 72 63.9
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 1.1e-16 90.5 62 69.4
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 1.9e-16 89.7 69 55.1
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 1.9e-16 89.7 48 79.2
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 4.3e-16 88.6 57 68.4
Cc10_g08650 Coffea canephora HOM05D007718 ORTHO05D009752 4.3e-16 88.6 112 42.9
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 7.4e-16 87.8 61 63.9
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 2.2e-15 86.3 78 52.6
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 2.8e-15 85.9 125 44.8
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 3.7e-15 85.5 70 61.4
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 6.3e-15 84.7 92 48.9
SalBow7G2847 Salvia bowleyana HOM05D007718 ORTHO05D009752 2.4e-14 82.8 126 44.4
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 3.1e-14 82.4 94 54.3
Oeu020544.1 Olea europaea HOM05D007718 ORTHO05D009752 2.9e-12 75.9 193 34.2
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 2.5e-11 72.8 97 40.2
BcaC02g08810 Brassica carinata HOM05D007718 ORTHO05D009752 5.1e-09 65.1 38 73.7
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 1.1e-08 63.9 50 62.0
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 1.1e-08 63.9 47 63.8
VMungo1383G3332 Vigna mungo HOM05D000479 ORTHO05D001285 1.5e-08 63.5 35 80.0
CsaV3_5G039910 Cucumis sativus L. HOM05D007718 ORTHO05D009752 3.3e-08 62.4 72 47.2
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 4.3e-08 62.0 83 38.6
MBI06_g14325_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 3.1e-06 55.8 79 44.3


User provided reference genes

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