Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 2.3e-118 429.5 326 100.0
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.2e-111 407.1 326 96.9
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 2.1e-58 230.3 326 68.4
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 8.2e-55 218.4 327 56.3
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.0e-53 213.8 327 67.0
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 3.8e-52 209.5 288 70.8
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 4.9e-52 209.1 265 63.8
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 1.9e-51 207.2 327 55.0
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 1.9e-51 207.2 266 64.3
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 3.2e-51 206.5 271 65.3
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 4.2e-51 206.1 264 65.9
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 1.6e-50 204.1 329 61.4
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 2.1e-50 203.8 262 75.2
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 3.5e-50 203.0 326 62.9
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 1.0e-49 201.4 263 61.2
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 1.8e-49 200.7 264 65.2
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 3.9e-49 199.5 269 59.9
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 6.7e-49 198.7 338 54.1
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 6.7e-49 198.7 270 63.7
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 8.7e-49 198.4 262 72.5
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 8.7e-49 198.4 262 73.7
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 8.7e-49 198.4 327 66.1
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 8.7e-49 198.4 327 63.9
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 1.1e-48 198.0 262 74.4
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 1.1e-48 198.0 275 59.3
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 1.5e-48 197.6 274 63.9
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 1.5e-48 197.6 326 62.3
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 1.5e-48 197.6 327 54.4
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 2.5e-48 196.8 271 66.1
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 7.4e-48 195.3 271 61.3
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 9.7e-48 194.9 270 60.7
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 3.7e-47 193.0 267 59.6
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 3.7e-47 193.0 264 63.3
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 4.8e-47 192.6 282 70.2
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 1.1e-46 191.4 263 60.1
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 2.4e-46 190.3 336 53.0
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 3.1e-46 189.9 326 62.6
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 5.3e-46 189.1 280 69.6
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 1.2e-45 188.0 280 68.9
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 1.2e-45 188.0 280 68.9
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 2.0e-45 187.2 280 69.3
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 1.3e-44 184.5 260 72.3
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 1.4e-43 181.0 326 61.7
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 6.1e-42 175.6 261 61.7
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 3.0e-41 173.3 263 70.7
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 3.0e-41 173.3 259 67.6
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 8.8e-41 171.8 332 50.3
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 1.1e-40 171.4 263 57.0
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 4.3e-40 169.5 258 56.6
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 3.7e-39 166.4 356 33.4
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 1.1e-38 164.9 187 49.7
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.8e-38 164.1 317 60.6
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 1.8e-38 164.1 272 64.7
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 1.5e-37 161.0 267 67.4
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 2.0e-37 160.6 251 70.1
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 3.4e-37 159.8 260 54.6
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 5.9e-37 159.1 276 65.6
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 2.2e-36 157.1 263 61.2
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 2.9e-36 156.8 123 64.2
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.1e-35 154.8 127 61.4
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 1.1e-35 154.8 127 61.4
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 9.4e-35 151.8 265 52.1
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 1.2e-34 151.4 129 59.7
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 1.0e-33 148.3 252 57.5
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 1.8e-33 147.5 131 59.5
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 3.9e-33 146.4 289 53.6
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 7.4e-32 142.1 302 59.6
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 1.7e-31 141.0 263 55.9
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 2.4e-30 137.1 127 59.8
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 2.6e-29 133.7 243 35.8
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 3.4e-29 133.3 135 51.9
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 5.9e-29 132.5 339 46.3
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 7.7e-29 132.1 189 67.2
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.3e-28 131.3 99 68.7
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 1.1e-27 128.3 144 52.1
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 3.2e-27 126.7 191 60.7
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 1.6e-26 124.4 346 34.4
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.8e-23 113.6 263 50.6
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 2.8e-23 113.6 189 61.4
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 8.2e-23 112.1 112 55.4
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.8e-22 110.9 118 53.4
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 4.1e-22 109.8 187 66.8
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 6.5e-20 102.4 120 45.0
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 1.1e-19 101.7 123 52.0
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 2.5e-19 100.5 123 43.9
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 9.4e-19 98.6 228 52.6
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-18 97.4 83 51.8
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 8.8e-17 92.0 64 68.8
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 1.2e-16 91.7 137 40.1
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.8e-14 84.3 194 44.8
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 7.0e-14 82.4 64 62.5
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 5.9e-13 79.3 64 57.8
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 2.2e-12 77.4 212 61.8
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 6.5e-12 75.9 64 56.2
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 1.1e-11 75.1 65 58.5
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 4.2e-11 73.2 121 38.8
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 8.0e-10 68.9 157 79.6
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.4e-09 68.2 45 71.1
CSS0023659 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 5.7e-08 62.8 38 78.9
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 1.1e-06 58.5 39 71.8


User provided reference genes

Program Settings