Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4664 Papaver somniferum HOM05D007228 ORTHO05D009099 0.0e+00 1328.9 749 100.0
PSO478G4831 Papaver somniferum HOM05D007228 ORTHO05D009099 0.0e+00 1270.0 778 93.4
Aqoxy5G02968 Aquilegia oxysepala HOM05D007228 ORTHO05D009099 1.5e-221 773.5 748 56.0
Dinv13695 Davidia involucrata HOM05D007228 ORTHO05D009099 6.2e-207 724.9 752 53.5
Ciclev10030919m.g Citrus clementina HOM05D007228 ORTHO05D009099 4.3e-192 675.6 750 50.1
Hma1.2p1_0338F.1_g129520 Hydrangea macrophylla HOM05D007228 ORTHO05D009099 4.3e-192 675.6 752 51.2
Nn3g16198 Nelumbo nucifera HOM05D007228 ORTHO05D009099 9.6e-192 674.5 892 45.7
GSVIVG01014990001 Vitis vinifera HOM05D007228 ORTHO05D009099 1.6e-191 673.7 743 50.5
Atru.chr6.1953 Acer truncatum HOM05D007228 ORTHO05D009099 8.1e-191 671.4 750 50.7
MBI11_g17279_MAGBIO Magnolia biondii HOM05D007228 ORTHO05D009099 8.9e-190 667.9 677 52.3
Cpa.g.sc13.201 Carica papaya HOM05D007228 ORTHO05D009099 9.3e-187 657.9 752 49.5
Duzib205G0703 Durio zibethinus HOM05D007228 ORTHO05D009099 1.2e-186 657.5 756 49.6
Potri.015G109700 Populus trichocarpa HOM05D007228 ORTHO05D009099 6.0e-186 655.2 750 49.2
Gohir.D12G197500 Gossypium hirsutum HOM05D007228 ORTHO05D009099 1.5e-181 640.6 753 48.5
QL10p000149 Quercus lobata HOM05D007228 ORTHO05D009099 7.1e-179 631.7 753 48.7
Actinidia18280 Actinidia chinensis HOM05D007228 ORTHO05D009099 2.3e-177 626.7 761 47.3
Manes.06G128600 Manihot esculenta HOM05D007228 ORTHO05D009099 4.8e-175 619.0 748 46.8
TWI39G0517 Tripterygium wilfordii HOM05D007228 ORTHO05D009099 8.1e-175 618.2 748 47.5
TAR629G1179 Trochodendron aralioides HOM05D007228 ORTHO05D009099 4.9e-172 609.0 459 66.9
Gorai.008G212000 Gossypium raimondii HOM05D007228 ORTHO05D009099 1.9e-171 607.1 732 47.8
Rhsim08G0200200 Rhododendron simsii HOM05D007228 ORTHO05D009099 5.4e-171 605.5 773 45.9
Gohir.A12G195100 Gossypium hirsutum HOM05D007228 ORTHO05D009099 9.3e-171 604.7 737 47.2
Solyc03g117990.1 Solanum lycopersicum HOM05D007228 ORTHO05D009099 1.8e-169 600.5 752 45.2
COL.COLO4_37286 Corchorus olitorius HOM05D007228 ORTHO05D009099 2.3e-169 600.1 752 46.0
Sopen03g036890 Solanum pennellii HOM05D007228 ORTHO05D009099 9.6e-168 594.7 752 45.1
Haze_07072 Corylus avellana HOM05D007228 ORTHO05D009099 8.1e-167 591.7 776 45.5
BraA10t44962Z Brassica rapa HOM05D007228 ORTHO05D009099 5.8e-165 585.5 757 45.0
MD06G1128600 Malus domestica HOM05D007228 ORTHO05D009099 5.8e-165 585.5 783 45.0
vmacro19097 Vaccinium macrocarpon HOM05D007228 ORTHO05D009099 5.8e-165 585.5 503 59.2
arahy.Tifrunner.gnm1.ann1.E4K3LT Arachis hypogaea HOM05D007228 ORTHO05D009099 6.5e-164 582.0 751 44.5
Ca_16830_v3 Cicer arietinum L. HOM05D007228 ORTHO05D009099 6.5e-164 582.0 752 44.0
arahy.Tifrunner.gnm1.ann1.RK1GDQ Arachis hypogaea HOM05D007228 ORTHO05D009099 8.4e-164 581.6 751 44.5
FvH4_5g10000 Fragaria vesca HOM05D007228 ORTHO05D009099 2.5e-163 580.1 761 44.0
Medtr8g095540 Medicago truncatula HOM05D007228 ORTHO05D009099 7.1e-163 578.6 750 44.7
A10p29130 Brassica napus HOM05D007228 ORTHO05D009099 2.1e-162 577.0 757 44.9
C09p69520 Brassica napus HOM05D007228 ORTHO05D009099 2.7e-162 576.6 766 44.6
Peaxi162Scf00314g00833 Petunia axillaris HOM05D007228 ORTHO05D009099 3.5e-162 576.2 752 44.9
BolC9t59696H Brassica oleracea HOM05D007228 ORTHO05D009099 6.0e-162 575.5 765 44.6
FAN18G1110 Fragaria x ananassa HOM05D007228 ORTHO05D009099 1.0e-161 574.7 758 43.8
AL6G17680 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 1.3e-161 574.3 753 44.5
CARHR205770 Cardamine hirsuta HOM05D007228 ORTHO05D009099 1.3e-161 574.3 759 44.1
Lj4g0027006 Lotus japonicus HOM05D007228 ORTHO05D009099 1.3e-161 574.3 752 44.7
Migut.D01167 Erythranthe guttata HOM05D007228 ORTHO05D009099 5.1e-161 572.4 757 44.3
Thhalv10012911m.g Eutrema salsugineum HOM05D007228 ORTHO05D009099 1.9e-160 570.5 756 44.7
Carub.0006s0635 Capsella rubella HOM05D007228 ORTHO05D009099 3.7e-159 566.2 755 44.2
AT5G07380 Arabidopsis thaliana HOM05D007228 ORTHO05D009099 4.8e-159 565.8 759 43.6
BcaC06g32443 Brassica carinata HOM05D007228 ORTHO05D009099 6.2e-159 565.5 765 43.9
FAN04G0692 Fragaria x ananassa HOM05D007228 ORTHO05D009099 1.4e-158 564.3 727 43.7
SalBow1G3473 Salvia bowleyana HOM05D007228 ORTHO05D009099 9.0e-158 561.6 758 43.7
Glyma.08G006100 Glycine max HOM05D007228 ORTHO05D009099 2.9e-156 556.6 751 43.3
CSS0045118 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 6.5e-156 555.4 508 57.7
FAN08G0661 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.5e-155 553.5 725 43.2
Nitab4.5_0011883g0020 Nicotiana tabacum HOM05D007228 ORTHO05D009099 2.5e-155 553.5 750 44.3
THA.LOC104819419 Tarenaya hassleriana HOM05D007228 ORTHO05D009099 9.3e-155 551.6 757 44.1
Nitab4.5_0000976g0280 Nicotiana tabacum HOM05D007228 ORTHO05D009099 3.5e-154 549.7 737 43.8
Manes.14G042701 Manihot esculenta HOM05D007228 ORTHO05D009099 1.3e-151 541.2 759 42.8
ECA247G3190 Erigeron canadensis HOM05D007228 ORTHO05D009099 5.3e-150 535.8 688 44.8
Cc04_g05590 Coffea canephora HOM05D007228 ORTHO05D009099 9.0e-150 535.0 741 43.3
HanXRQChr08g0229031 Helianthus annuus HOM05D007228 ORTHO05D009099 2.0e-149 533.9 519 52.6
Cfa018687 Carpinus fangiana HOM05D007228 ORTHO05D009099 2.9e-148 530.0 492 55.1
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 8.5e-148 528.5 787 41.9
VMungo0251G0919 Vigna mungo HOM05D007228 ORTHO05D009099 1.9e-147 527.3 760 41.8
RcHm_v2.0_Chr7g0188261 Rosa chinensis HOM05D007228 ORTHO05D009099 7.2e-147 525.4 700 43.3
CAN.G1008.38 Capsicum annuum HOM05D007228 ORTHO05D009099 6.7e-145 518.8 779 40.8
Psat7g040280 Pisum sativum HOM05D007228 ORTHO05D009099 1.1e-144 518.1 756 41.7
SGA_v2.0_scaffold515G52653 Striga asiatica HOM05D007228 ORTHO05D009099 5.7e-144 515.8 758 41.0
Sabra15G0131800 Salix brachista HOM05D007228 ORTHO05D009099 4.5e-141 506.1 678 44.0
Thecc.03G143400 Theobroma cacao HOM05D007228 ORTHO05D009099 1.6e-138 497.7 425 59.3
Prupe.5G138400 Prunus persica HOM05D007228 ORTHO05D009099 2.7e-138 496.9 620 46.3
Aa31LG3G18990 Aethionema arabicum HOM05D007228 ORTHO05D009099 3.1e-134 483.4 750 40.5
Sed0011749 Sechium edule HOM05D007228 ORTHO05D009099 4.1e-134 483.0 756 40.2
Lj9C489T6 Lonicera japonica HOM05D007228 ORTHO05D009099 1.2e-133 481.5 698 43.3
Lsat_1_v5_gn_1_30460 Lactuca sativa HOM05D007228 ORTHO05D009099 1.0e-132 478.4 689 41.1
Zm00001eb334150 Zea mays HOM05D007228 ORTHO05D009099 1.5e-131 474.6 769 39.5
Phvul.002G279800 Phaseolus vulgaris HOM05D007228 ORTHO05D009099 3.6e-130 469.9 753 39.0
ClCG07G006120 Citrullus lanatus HOM05D007228 ORTHO05D009099 7.4e-128 462.2 749 40.3
TPR.G12794 Trifolium pratense HOM05D007228 ORTHO05D009099 3.5e-125 453.4 654 41.7
Os01g0103900 Oryza sativa ssp. japonica HOM05D007228 ORTHO05D009099 9.4e-123 445.3 493 48.1
PGR142G1350 Punica granatum HOM05D007228 ORTHO05D009099 1.3e-116 424.9 570 43.7
CsaV3_5G013390 Cucumis sativus L. HOM05D007228 ORTHO05D009099 2.3e-113 414.1 787 36.2
EL10Ac5g11261 Beta vulgaris HOM05D007228 ORTHO05D009099 3.0e-113 413.7 497 45.9
MELO3C018355.2 Cucumis melo HOM05D007228 ORTHO05D009099 2.4e-110 404.1 682 38.4
Eucgr.E04338 Eucalyptus grandis HOM05D007228 ORTHO05D009099 6.8e-105 386.0 500 43.2
AUR62036968 Chenopodium quinoa HOM05D007228 ORTHO05D009099 7.8e-101 372.5 497 42.1
SEGI_11491 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 2.3e-100 370.9 444 45.0
Hund02521 Selenicereus undatus HOM05D007228 ORTHO05D009099 1.8e-97 361.3 892 32.5
Ah.02g114480 Amaranthus hybridus HOM05D003541 ORTHO05D004095 3.2e-94 350.5 520 42.7
Sc04g0000080 Simmondsia chinensis HOM05D007228 ORTHO05D009099 4.9e-87 326.6 616 35.9
Sc04g0000120 Simmondsia chinensis HOM05D007228 ORTHO05D009099 8.3e-87 325.9 616 35.9
AUR62032199 Chenopodium quinoa HOM05D007228 ORTHO05D009099 5.2e-81 306.6 527 36.4
PGSC0003DMG400014227 Solanum tuberosum HOM05D007228 ORTHO05D009099 5.2e-81 306.6 466 40.3
CSS0001938 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 1.0e-76 292.4 264 57.2
SMO119G0281 Selaginella moellendorffii HOM05D007228 ORTHO05D009099 4.0e-73 280.4 500 35.2
unitig_747.g21316 Utricularia gibba HOM05D002839 ORTHO05D003349 4.0e-73 280.4 556 35.3
Lalb_Chr12g0202641 Lupinus albus HOM05D007228 ORTHO05D009099 4.0e-65 253.8 262 50.0
GSVIVG01035283001 Vitis vinifera HOM05D007228 ORTHO05D009099 1.2e-64 252.3 264 51.5
HPP92_021579 Vanilla planifolia HOM05D007228 ORTHO05D009099 1.0e-52 212.6 476 34.9
Lalb_Chr12g0202651 Lupinus albus HOM05D007228 ORTHO05D009099 3.2e-46 191.0 197 47.7
AagrBONN_evm.TU.Sc2ySwM_344.3780 Anthoceros agrestis HOM05D007228 ORTHO05D009099 1.5e-43 182.2 255 37.3
Psat3g128520 Pisum sativum HOM05D007228 ORTHO05D009099 5.7e-43 180.3 356 34.8
Psat0s3642g0120 Pisum sativum HOM05D007228 ORTHO05D009099 6.9e-41 173.3 356 33.4
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 4.6e-37 160.6 177 45.2
Psat0s5010g0080 Pisum sativum HOM05D005021 ORTHO05D006824 1.8e-36 158.7 189 43.4
AUR62009120 Chenopodium quinoa HOM05D007228 ORTHO05D009099 2.2e-31 141.7 490 29.0
TPR.G21492 Trifolium pratense HOM05D007228 ORTHO05D009099 4.2e-30 137.5 201 38.8
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 3.9e-28 131.0 114 51.8
CDE06G2808 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 1.2e-24 119.4 113 50.4
MSTRG.9383 Avicennia marina HOM05D007228 ORTHO05D009099 3.9e-20 104.4 286 32.5
HPP92_021580 Vanilla planifolia HOM05D007228 ORTHO05D009099 5.1e-20 104.0 169 36.1
HanXRQChr08g0229021 Helianthus annuus HOM05D007228 ORTHO05D009099 8.8e-20 103.2 123 52.0
Lalb_Chr12g0202661 Lupinus albus HOM05D007228 ORTHO05D009099 2.0e-16 92.0 132 47.0
CDE02G0692 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 1.0e-15 89.7 94 48.9
Sp6g35490 Schrenkiella parvula HOM05D007228 ORTHO05D009099 2.9e-15 88.2 138 44.2
AL468U10020 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 1.6e-13 82.4 83 48.2
SEGI_40191 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 1.0e-07 63.2 54 61.1
Peaxi162Scf00677g00035 Petunia axillaris HOM05D000800 ORTHO05D000658 2.2e-07 62.0 142 34.5


User provided reference genes

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