Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 1.8e-100 369.4 205 100.0
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 6.0e-96 354.4 206 96.1
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.4e-28 130.6 186 41.9
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 3.1e-28 129.4 185 41.6
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 2.0e-27 126.7 186 40.3
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.0e-27 126.7 180 43.3
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 2.7e-27 126.3 197 39.6
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 1.3e-26 124.0 178 42.1
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 1.7e-26 123.6 186 39.2
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 2.9e-26 122.9 180 42.2
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 3.8e-26 122.5 178 39.9
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 6.5e-26 121.7 179 39.7
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 2.5e-25 119.8 186 38.7
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 2.1e-24 116.7 186 38.7
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 2.7e-24 116.3 182 39.0
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 8.0e-24 114.8 184 40.8
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 1.0e-23 114.4 184 39.1
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 4.0e-23 112.5 178 46.1
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.2e-22 110.9 185 39.5
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 2.0e-22 110.2 176 40.9
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 2.0e-22 110.2 182 47.3
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 2.6e-22 109.8 183 36.1
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 2.6e-22 109.8 178 37.1
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 3.4e-22 109.4 190 41.1
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 3.4e-22 109.4 182 44.5
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 3.4e-22 109.4 179 40.2
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 4.4e-22 109.0 179 39.7
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 4.4e-22 109.0 202 36.1
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 7.5e-22 108.2 188 37.8
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 9.8e-22 107.8 184 38.0
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 9.8e-22 107.8 187 36.4
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 9.8e-22 107.8 186 34.9
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 9.8e-22 107.8 179 36.9
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 9.8e-22 107.8 185 37.8
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.3e-21 107.5 186 38.7
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 1.3e-21 107.5 177 37.3
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.7e-21 107.1 177 39.0
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.7e-21 107.1 187 44.9
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 2.2e-21 106.7 183 45.9
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 2.8e-21 106.3 189 38.1
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 6.3e-21 105.1 189 33.9
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 1.1e-20 104.4 192 41.1
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 1.1e-20 104.4 176 38.6
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 2.4e-20 103.2 188 39.4
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 3.1e-20 102.8 174 42.0
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 4.1e-20 102.4 181 42.5
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 5.4e-20 102.1 187 35.8
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 7.0e-20 101.7 186 38.7
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.2e-19 100.9 191 39.8
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 1.2e-19 100.9 180 45.0
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 1.2e-19 100.9 181 37.6
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 1.6e-19 100.5 189 34.9
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 2.0e-19 100.1 185 36.2
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 2.0e-19 100.1 182 36.3
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 2.7e-19 99.8 188 39.4
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 4.5e-19 99.0 175 37.7
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 7.7e-19 98.2 183 35.5
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.0e-18 97.8 182 34.1
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 1.0e-18 97.8 181 34.3
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 1.0e-18 97.8 181 36.5
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.3e-18 97.4 183 36.6
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 1.7e-18 97.1 181 39.8
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 1.7e-18 97.1 183 40.4
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.7e-18 97.1 177 36.2
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 2.9e-18 96.3 185 35.7
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 2.9e-18 96.3 178 38.2
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 3.8e-18 95.9 187 36.9
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 3.8e-18 95.9 178 40.4
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.8e-18 95.9 194 40.7
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 5.0e-18 95.5 194 40.2
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 5.0e-18 95.5 194 40.7
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 5.0e-18 95.5 176 34.7
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 8.6e-18 94.7 195 31.3
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 8.6e-18 94.7 181 37.0
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 8.6e-18 94.7 175 37.1
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 1.1e-17 94.4 195 32.3
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 1.5e-17 94.0 187 36.9
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 1.5e-17 94.0 171 38.0
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 1.9e-17 93.6 182 34.1
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 1.9e-17 93.6 184 34.2
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 4.2e-17 92.4 179 36.3
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 4.2e-17 92.4 186 29.0
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 4.2e-17 92.4 140 39.3
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 5.5e-17 92.0 178 35.4
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 9.5e-17 91.3 179 34.6
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 2.1e-16 90.1 181 34.3
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 2.8e-16 89.7 189 29.6
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 1.0e-15 87.8 177 35.6
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.4e-15 87.4 177 35.6
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 1.4e-15 87.4 177 33.3
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 1.8e-15 87.0 186 32.3
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 1.8e-15 87.0 186 32.3
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 1.8e-15 87.0 183 36.1
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 2.3e-15 86.7 180 32.2
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 2.3e-15 86.7 182 34.1
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 2.3e-15 86.7 182 34.1
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 2.3e-15 86.7 131 37.4
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 3.0e-15 86.3 181 35.9
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 4.0e-15 85.9 186 29.0
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 8.8e-15 84.7 181 30.4
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 8.8e-15 84.7 181 34.3
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 8.8e-15 84.7 214 33.6
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 1.2e-14 84.3 191 32.5
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.2e-14 84.3 182 31.9
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 1.2e-14 84.3 177 31.1
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 1.2e-14 84.3 176 31.8
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 1.5e-14 84.0 177 33.3
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 2.0e-14 83.6 185 37.3
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 2.6e-14 83.2 178 37.6
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 5.7e-14 82.0 175 34.9
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 5.7e-14 82.0 203 30.5
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 5.7e-14 82.0 179 31.8
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 7.5e-14 81.6 178 32.6
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 1.7e-13 80.5 185 32.4
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 1.7e-13 80.5 185 32.4
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 3.7e-13 79.3 176 31.2
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 1.4e-12 77.4 183 31.7
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 3.1e-12 76.3 218 29.4
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.2e-11 74.3 166 32.5
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 5.9e-11 72.0 166 31.9
MBI10_g11211_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 7.3e-09 65.1 189 36.0
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 2.1e-08 63.5 79 44.3
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 3.6e-08 62.8 50 60.0
MBI07_g39476_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 3.0e-07 59.7 60 46.7
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.7e-06 55.5 49 55.1
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 7.5e-06 55.1 49 55.1


User provided reference genes

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