Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4413 Papaver somniferum HOM05D004421 ORTHO05D005227 1.4e-54 216.1 109 100.0
PSO675G5827 Papaver somniferum HOM05D004421 ORTHO05D005227 1.4e-54 216.1 109 100.0
Hma1.2p1_0445F.1_g154450 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 2.2e-44 182.2 108 81.5
Hma1.2p1_0177F.1_g077900 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 4.1e-43 177.9 107 82.2
Hma1.2p1_0177F.1_g077905 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 4.1e-43 177.9 107 82.2
ECA236G3405 Erigeron canadensis HOM05D004421 ORTHO05D005227 1.2e-42 176.4 110 79.1
Lsat_1_v5_gn_7_92700 Lactuca sativa HOM05D004421 ORTHO05D005227 1.6e-42 176.0 108 79.6
LjContig00564g0020145 Lotus japonicus HOM05D004421 ORTHO05D005227 2.0e-42 175.6 98 85.7
LjContig00564g0024160 Lotus japonicus HOM05D004421 ORTHO05D005227 2.0e-42 175.6 98 85.7
CAN.G149.31 Capsicum annuum HOM05D004421 ORTHO05D005227 2.6e-42 175.3 109 75.2
Psat4g220560 Pisum sativum HOM05D004421 ORTHO05D005227 2.6e-42 175.3 104 79.8
CSS0000360 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 4.5e-42 174.5 109 80.7
CSS0029217 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 4.5e-42 174.5 109 80.7
Glyma.14G047100 Glycine max HOM05D004421 ORTHO05D005227 4.5e-42 174.5 106 81.1
LjContig00564g0000485 Lotus japonicus HOM05D004421 ORTHO05D005227 5.9e-42 174.1 98 84.7
LjContig00564g0024311 Lotus japonicus HOM05D004421 ORTHO05D005227 5.9e-42 174.1 98 84.7
CAN.G358.76 Capsicum annuum HOM05D004421 ORTHO05D005227 7.7e-42 173.7 109 74.3
Eucgr.B01010 Eucalyptus grandis HOM05D004421 ORTHO05D005227 7.7e-42 173.7 109 79.8
vmacro09354 Vaccinium macrocarpon HOM05D004421 ORTHO05D005227 7.7e-42 173.7 109 79.8
DCAR_019262 Daucus carota HOM05D004421 ORTHO05D005227 1.0e-41 173.3 108 80.6
Lalb_Chr10g0105671 Lupinus albus HOM05D004421 ORTHO05D005227 1.3e-41 172.9 98 83.7
Rhsim04G0051300 Rhododendron simsii HOM05D004421 ORTHO05D005227 1.3e-41 172.9 109 79.8
TPR.G7933 Trifolium pratense HOM05D004421 ORTHO05D005227 1.3e-41 172.9 103 79.6
arahy.Tifrunner.gnm1.ann1.J4LN0V Arachis hypogaea HOM05D004421 ORTHO05D005227 1.7e-41 172.6 107 79.4
Medtr8g099150 Medicago truncatula HOM05D004421 ORTHO05D005227 1.7e-41 172.6 98 82.7
Phvul.008G212200 Phaseolus vulgaris HOM05D004421 ORTHO05D005227 1.7e-41 172.6 98 83.7
VMungo0647G1664 Vigna mungo HOM05D004421 ORTHO05D005227 1.7e-41 172.6 98 84.7
arahy.Tifrunner.gnm1.ann1.BKRM87 Arachis hypogaea HOM05D004421 ORTHO05D005227 2.2e-41 172.2 107 79.4
Ca_23316_v3 Cicer arietinum L. HOM05D004421 ORTHO05D005227 2.2e-41 172.2 98 82.7
Cfa014325 Carpinus fangiana HOM05D004421 ORTHO05D005227 2.9e-41 171.8 107 77.6
PGR042G0750 Punica granatum HOM05D004421 ORTHO05D005227 2.9e-41 171.8 107 77.6
EL10Ac5g12553 Beta vulgaris HOM05D004421 ORTHO05D005227 3.8e-41 171.4 107 76.6
QL10p065608 Quercus lobata HOM05D004421 ORTHO05D005227 3.8e-41 171.4 107 77.6
CiPaw.08G089000 Carya illinoinensis HOM05D004421 ORTHO05D005227 5.0e-41 171.0 104 81.7
Glyma.02G269800 Glycine max HOM05D004421 ORTHO05D005227 6.5e-41 170.6 106 80.2
TAR629G1061 Trochodendron aralioides HOM05D004421 ORTHO05D005227 6.5e-41 170.6 109 78.9
CiPaw.03G156500 Carya illinoinensis HOM05D004421 ORTHO05D005227 8.5e-41 170.2 104 80.8
QL08p031014 Quercus lobata HOM05D004421 ORTHO05D005227 8.5e-41 170.2 107 77.6
HanXRQChr04g0126911 Helianthus annuus HOM05D004421 ORTHO05D005227 1.5e-40 169.5 103 80.6
Nitab4.5_0005588g0030 Nicotiana tabacum HOM05D004421 ORTHO05D005227 1.5e-40 169.5 109 75.2
Peaxi162Scf00047g00850 Petunia axillaris HOM05D004421 ORTHO05D005227 1.5e-40 169.5 109 72.5
QL10p065434 Quercus lobata HOM05D004421 ORTHO05D005227 1.5e-40 169.5 107 76.6
Medtr8g016300 Medicago truncatula HOM05D004421 ORTHO05D005227 1.9e-40 169.1 98 80.6
CAN.G358.77 Capsicum annuum HOM05D004421 ORTHO05D005227 2.5e-40 168.7 109 72.5
Nitab4.5_0007533g0030 Nicotiana tabacum HOM05D004421 ORTHO05D005227 2.5e-40 168.7 109 74.3
TPR.G1800 Trifolium pratense HOM05D004421 ORTHO05D005227 2.5e-40 168.7 103 77.7
Aqoxy7G01112 Aquilegia oxysepala HOM05D004421 ORTHO05D005227 3.2e-40 168.3 102 80.4
GSVIVG01036899001 Vitis vinifera HOM05D004421 ORTHO05D005227 4.2e-40 167.9 108 77.8
MSTRG.14457 Avicennia marina HOM05D004421 ORTHO05D005227 5.5e-40 167.5 109 76.1
DCAR_012923 Daucus carota HOM05D004421 ORTHO05D005227 5.5e-40 167.5 108 77.8
CsaV3_2G034620 Cucumis sativus L. HOM05D004421 ORTHO05D005227 7.2e-40 167.2 109 74.3
Rhsim06G0166700 Rhododendron simsii HOM05D004421 ORTHO05D005227 1.2e-39 166.4 109 76.1
PGSC0003DMG400010437 Solanum tuberosum HOM05D004421 ORTHO05D005227 1.2e-39 166.4 109 71.6
Peaxi162Scf00149g00049 Petunia axillaris HOM05D004421 ORTHO05D005227 1.6e-39 166.0 109 71.6
Prupe.3G211700 Prunus persica HOM05D004421 ORTHO05D005227 2.1e-39 165.6 107 77.6
Haze_12777 Corylus avellana HOM05D004421 ORTHO05D005227 2.7e-39 165.2 108 75.9
ECA234G2260 Erigeron canadensis HOM05D004421 ORTHO05D005227 2.7e-39 165.2 108 74.1
Oeu013122.1 Olea europaea HOM05D004421 ORTHO05D005227 2.7e-39 165.2 107 72.9
AUR62030497 Chenopodium quinoa HOM05D004421 ORTHO05D005227 3.6e-39 164.9 108 75.9
Nitab4.5_0000138g0020 Nicotiana tabacum HOM05D004421 ORTHO05D005227 3.6e-39 164.9 109 73.4
Sed0012667 Sechium edule HOM05D004421 ORTHO05D005227 3.6e-39 164.9 106 74.5
TWI36G1565 Tripterygium wilfordii HOM05D004421 ORTHO05D005227 3.6e-39 164.9 109 75.2
MSTRG.12990 Avicennia marina HOM05D004421 ORTHO05D005227 4.7e-39 164.5 102 77.5
AUR62030797 Chenopodium quinoa HOM05D004421 ORTHO05D005227 4.7e-39 164.5 108 75.9
Nitab4.5_0001288g0200 Nicotiana tabacum HOM05D004421 ORTHO05D005227 4.7e-39 164.5 109 72.5
CANSAT64G1364 Cannabis sativa HOM05D004421 ORTHO05D005227 6.1e-39 164.1 111 75.7
Sopen02g017940 Solanum pennellii HOM05D004421 ORTHO05D005227 6.1e-39 164.1 105 72.4
Aqoxy6G00590 Aquilegia oxysepala HOM05D004421 ORTHO05D005227 1.0e-38 163.3 108 73.1
Ciclev10009985m.g Citrus clementina HOM05D004421 ORTHO05D005227 1.0e-38 163.3 107 74.8
Oeu054302.1 Olea europaea HOM05D004421 ORTHO05D005227 1.4e-38 162.9 107 72.0
Solyc02g068770.4 Solanum lycopersicum HOM05D004421 ORTHO05D005227 1.4e-38 162.9 105 71.4
ClCG02G009100 Citrullus lanatus HOM05D004421 ORTHO05D005227 1.8e-38 162.5 102 77.5
Manes.13G067100 Manihot esculenta HOM05D004421 ORTHO05D005227 1.8e-38 162.5 107 75.7
Potri.002G225600 Populus trichocarpa HOM05D004421 ORTHO05D005227 3.0e-38 161.8 109 76.1
TWI79G1637 Tripterygium wilfordii HOM05D004421 ORTHO05D005227 3.0e-38 161.8 109 74.3
Cpa.g.sc12.255 Carica papaya HOM05D004421 ORTHO05D005227 5.2e-38 161.0 106 77.4
FAN02G1632 Fragaria x ananassa HOM05D004421 ORTHO05D005227 6.7e-38 160.6 109 74.3
Lsat_1_v5_gn_5_123820 Lactuca sativa HOM05D004421 ORTHO05D005227 6.7e-38 160.6 98 80.6
SGA_v2.0_scaffold392G50685 Striga asiatica HOM05D004421 ORTHO05D005227 6.7e-38 160.6 107 72.9
Thecc.07G030200 Theobroma cacao HOM05D004421 ORTHO05D005227 6.7e-38 160.6 109 73.4
FvH4_6g42460 Fragaria vesca HOM05D004421 ORTHO05D005227 8.8e-38 160.2 109 74.3
FAN05G5559 Fragaria x ananassa HOM05D004421 ORTHO05D005227 8.8e-38 160.2 109 74.3
FAN09G1846 Fragaria x ananassa HOM05D004421 ORTHO05D005227 8.8e-38 160.2 109 74.3
FAN14G1774 Fragaria x ananassa HOM05D004421 ORTHO05D005227 8.8e-38 160.2 109 74.3
RcHm_v2.0_Chr2g0158361 Rosa chinensis HOM05D004421 ORTHO05D005227 8.8e-38 160.2 109 74.3
Sabra02G0172700 Salix brachista HOM05D004421 ORTHO05D005227 3.3e-37 158.3 109 74.3
unitig_748.g8294 Utricularia gibba HOM05D004421 ORTHO05D005227 3.3e-37 158.3 98 79.6
SalBow3G0779 Salvia bowleyana HOM05D004421 ORTHO05D005227 4.4e-37 157.9 107 71.0
Gorai.005G241500 Gossypium raimondii HOM05D004421 ORTHO05D005227 5.7e-37 157.5 109 70.6
Ah.12g058680 Amaranthus hybridus HOM05D004421 ORTHO05D005227 7.5e-37 157.1 107 72.9
CDE04G3645 Ceratophyllum demersum HOM05D004421 ORTHO05D005227 7.5e-37 157.1 101 74.3
Potri.014G157400 Populus trichocarpa HOM05D004421 ORTHO05D005227 9.7e-37 156.8 107 73.8
Sc12g0002130 Simmondsia chinensis HOM05D004421 ORTHO05D005227 9.7e-37 156.8 107 73.8
unitig_32.g10858 Utricularia gibba HOM05D004421 ORTHO05D005227 1.3e-36 156.4 98 79.6
Gohir.A03G192600 Gossypium hirsutum HOM05D004421 ORTHO05D005227 3.7e-36 154.8 109 69.7
CDE06G2669 Ceratophyllum demersum HOM05D004421 ORTHO05D005227 6.3e-36 154.1 101 72.3
Cc05_g02530 Coffea canephora HOM05D004421 ORTHO05D005227 1.4e-35 152.9 109 67.9
Gohir.D02G213600 Gossypium hirsutum HOM05D004421 ORTHO05D005227 3.1e-35 151.8 109 68.8
SHI33915 Sapria himalayana HOM05D004421 ORTHO05D005227 3.1e-35 151.8 98 73.5
MELO3C019309.2 Cucumis melo HOM05D004421 ORTHO05D005227 4.1e-35 151.4 101 73.3
Duzib128G1691 Durio zibethinus HOM05D004421 ORTHO05D005227 4.1e-35 151.4 108 70.4
Eucgr.B01013 Eucalyptus grandis HOM05D004421 ORTHO05D005227 4.1e-35 151.4 94 79.8
Atru.chr2.3508 Acer truncatum HOM05D004421 ORTHO05D005227 5.3e-35 151.0 98 71.4
Cc05_g14180 Coffea canephora HOM05D004421 ORTHO05D005227 5.3e-35 151.0 106 68.9
ATR0665G259 Amborella trichopoda HOM05D004421 ORTHO05D005227 9.1e-35 150.2 98 75.5
SGA_v2.0_scaffold363G49953 Striga asiatica HOM05D004421 ORTHO05D005227 9.1e-35 150.2 107 69.2
COL.COLO4_09709 Corchorus olitorius HOM05D004421 ORTHO05D005227 5.0e-33 144.4 109 66.1
MBI16_g23852_MAGBIO Magnolia biondii HOM05D004421 ORTHO05D005227 1.1e-32 143.3 111 66.7
Hund24697 Selenicereus undatus HOM05D004421 ORTHO05D005227 5.5e-32 141.0 98 72.4
SGA_v2.0_scaffold159G37698 Striga asiatica HOM05D004421 ORTHO05D005227 5.5e-32 141.0 98 69.4
THA.LOC104811627 Tarenaya hassleriana HOM05D004421 ORTHO05D005227 1.2e-31 139.8 106 64.2
CSS0048822 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 1.6e-31 139.4 109 68.8
Aa31LG3G11160 Aethionema arabicum HOM05D004421 ORTHO05D005227 6.1e-31 137.5 107 60.7
BolC2t07739H Brassica oleracea HOM05D004421 ORTHO05D005227 1.8e-30 136.0 107 61.7
BraA02t06048Z Brassica rapa HOM05D004421 ORTHO05D005227 1.8e-30 136.0 107 59.8
C02p16370 Brassica napus HOM05D004421 ORTHO05D005227 2.3e-30 135.6 107 61.7
A02p09830 Brassica napus HOM05D004421 ORTHO05D005227 5.2e-30 134.4 107 58.9
BcaB05g22185 Brassica carinata HOM05D004421 ORTHO05D005227 6.8e-30 134.0 107 61.7
BcaC04g20265 Brassica carinata HOM05D004421 ORTHO05D005227 6.8e-30 134.0 107 60.7
BraA10t43337Z Brassica rapa HOM05D004421 ORTHO05D005227 6.8e-30 134.0 107 60.7
Thhalv10015072m.g Eutrema salsugineum HOM05D004421 ORTHO05D005227 1.5e-29 132.9 107 62.6
BcaB08g35879 Brassica carinata HOM05D004421 ORTHO05D005227 2.0e-29 132.5 106 60.4
Carub.0008s1546 Capsella rubella HOM05D004421 ORTHO05D005227 2.0e-29 132.5 107 59.8
THA.LOC104813431 Tarenaya hassleriana HOM05D004421 ORTHO05D005227 2.6e-29 132.1 98 65.3
Sp6g17090 Schrenkiella parvula HOM05D004421 ORTHO05D005227 3.4e-29 131.7 107 60.7
AT5G55140 Arabidopsis thaliana HOM05D004421 ORTHO05D005227 5.7e-29 131.0 107 59.8
AL8G30670 Arabidopsis lyrata HOM05D004421 ORTHO05D005227 7.5e-29 130.6 107 58.9
TPR.G40166 Trifolium pratense HOM05D004421 ORTHO05D005227 7.5e-29 130.6 86 74.4
CARHR268500 Cardamine hirsuta HOM05D004421 ORTHO05D005227 1.3e-28 129.8 107 59.8
A05p12050 Brassica napus HOM05D004421 ORTHO05D005227 1.7e-28 129.4 108 60.2
A10p12420 Brassica napus HOM05D004421 ORTHO05D005227 1.7e-28 129.4 108 60.2
C09p45840 Brassica napus HOM05D004421 ORTHO05D005227 1.7e-28 129.4 108 60.2
BolC9t57441H Brassica oleracea HOM05D004421 ORTHO05D005227 1.7e-28 129.4 108 60.2
SEGI_06591 Sequoiadendron giganteum HOM05D004421 ORTHO05D005227 1.6e-26 122.9 106 57.5
HPP92_026149 Vanilla planifolia HOM05D004421 ORTHO05D005227 3.5e-26 121.7 97 59.8
Lj2g0010759 Lotus japonicus HOM05D004421 ORTHO05D005227 7.7e-26 120.6 107 59.8
vmacro12170 Vaccinium macrocarpon HOM05D004421 ORTHO05D005227 1.3e-25 119.8 94 68.1
Zm00001eb211500 Zea mays HOM05D004421 ORTHO05D005227 1.3e-25 119.8 97 60.8
Dinv22240 Davidia involucrata HOM05D004421 ORTHO05D005227 2.9e-25 118.6 66 84.8
Os08g0110100 Oryza sativa ssp. japonica HOM05D004421 ORTHO05D005227 5.0e-25 117.9 97 59.8
BcaC03g14260 Brassica carinata HOM05D004421 ORTHO05D005227 3.6e-23 111.7 79 67.1
Eucgr.B01894 Eucalyptus grandis HOM05D004421 ORTHO05D005227 4.7e-23 111.3 65 81.5
Hma1.2p1_2381F.1_g321010 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 1.2e-21 106.7 84 63.1
BraA03t14310Z Brassica rapa HOM05D004421 ORTHO05D005227 1.7e-20 102.8 86 59.3
FvH4_6g04610 Fragaria vesca HOM05D004421 ORTHO05D005227 2.8e-20 102.1 75 72.0
A08p21130 Brassica napus HOM05D004421 ORTHO05D005227 3.7e-20 101.7 86 59.3
Mapoly0058s0042 Marchantia polymorpha HOM05D004421 ORTHO05D005227 3.7e-20 101.7 94 57.4
BcaC03g14258 Brassica carinata HOM05D004421 ORTHO05D005227 3.1e-19 98.6 80 61.2
Os06g0339800 Oryza sativa ssp. japonica HOM05D004421 ORTHO05D005227 1.2e-18 96.7 97 53.6
AagrBONN_evm.TU.Sc2ySwM_344.5034 Anthoceros agrestis HOM05D004421 ORTHO05D005227 1.6e-18 96.3 91 52.7
Migut.H01800 Erythranthe guttata HOM05D004421 ORTHO05D005227 1.5e-16 89.7 56 75.0
HanXRQChr16g0506671 Helianthus annuus HOM05D004421 ORTHO05D005227 1.5e-16 89.7 58 75.9
Pp3c26_2200 Physcomitrium patens HOM05D004421 ORTHO05D005227 5.6e-16 87.8 85 49.4
MD09G1112900 Malus domestica HOM05D004421 ORTHO05D005227 9.5e-16 87.0 57 73.7
Potri.010G076275 Populus trichocarpa HOM05D004421 ORTHO05D005227 6.1e-15 84.3 76 60.5
GSVIVG01030492001 Vitis vinifera HOM05D004421 ORTHO05D005227 2.3e-14 82.4 58 72.4
Manes.12G070801 Manihot esculenta HOM05D004421 ORTHO05D005227 2.0e-13 79.3 56 67.9
SMO172G0081 Selaginella moellendorffii HOM05D004421 ORTHO05D005227 1.7e-12 76.3 96 42.7
RcHm_v2.0_Chr4g0419171 Rosa chinensis HOM05D004421 ORTHO05D005227 4.6e-10 68.2 109 40.4
Nn2g15167 Nelumbo nucifera HOM05D004421 ORTHO05D005227 8.6e-09 63.9 46 71.7


User provided reference genes

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