Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4366 Papaver somniferum HOM05D001997 ORTHO05D004620 0.0e+00 1233.8 646 100.0
PSO675G0019 Papaver somniferum HOM05D001997 ORTHO05D004620 0.0e+00 1164.8 649 94.0
TAR622G0498 Trochodendron aralioides HOM05D001997 ORTHO05D004620 1.5e-177 627.1 663 54.1
TAR636G0474 Trochodendron aralioides HOM05D001997 ORTHO05D004620 2.0e-174 616.7 657 53.7
Cfa015772 Carpinus fangiana HOM05D001997 ORTHO05D004620 1.6e-171 607.1 653 52.7
Hma1.2p1_0597F.1_g186510 Hydrangea macrophylla HOM05D001997 ORTHO05D004620 6.8e-170 601.7 654 52.9
Dinv22695 Davidia involucrata HOM05D001997 ORTHO05D004620 1.7e-168 597.0 648 52.6
QL10p047463 Quercus lobata HOM05D001997 ORTHO05D004620 2.9e-168 596.3 658 51.7
Aqoxy7G03960 Aquilegia oxysepala HOM05D001997 ORTHO05D004620 1.1e-167 594.3 661 51.9
MBI11_g35030_MAGBIO Magnolia biondii HOM05D001997 ORTHO05D004620 1.8e-167 593.6 653 50.8
Haze_00722 Corylus avellana HOM05D001997 ORTHO05D004620 1.3e-165 587.4 645 52.2
Duzib093G0427 Durio zibethinus HOM05D001997 ORTHO05D004620 2.5e-164 583.2 642 51.7
Rhsim09G0030400 Rhododendron simsii HOM05D001997 ORTHO05D004620 2.5e-164 583.2 653 49.3
Potri.007G124700 Populus trichocarpa HOM05D001997 ORTHO05D004620 6.2e-163 578.6 661 50.5
Ciclev10019328m.g Citrus clementina HOM05D001997 ORTHO05D004620 8.0e-163 578.2 649 50.7
Manes.04G048600 Manihot esculenta HOM05D001997 ORTHO05D004620 1.0e-162 577.8 658 49.8
RcHm_v2.0_Chr1g0354651 Rosa chinensis HOM05D001997 ORTHO05D004620 1.8e-162 577.0 670 49.3
CSS0007184 Camellia sinensis var. sinensis HOM05D001997 ORTHO05D004620 4.0e-162 575.9 646 49.7
Atru.chr3.1570 Acer truncatum HOM05D001997 ORTHO05D004620 8.9e-162 574.7 664 51.5
Atru.chr3.1589 Acer truncatum HOM05D001997 ORTHO05D004620 8.9e-162 574.7 664 51.5
Lj6C60T7 Lonicera japonica HOM05D001997 ORTHO05D004620 5.8e-161 572.0 656 49.8
Potri.017G035700 Populus trichocarpa HOM05D001997 ORTHO05D004620 1.3e-160 570.9 657 49.9
Sabra17G0022600 Salix brachista HOM05D001997 ORTHO05D004620 2.2e-160 570.1 665 49.5
Gohir.D08G083300 Gossypium hirsutum HOM05D001997 ORTHO05D004620 2.9e-160 569.7 649 49.8
Gorai.006G186500 Gossypium raimondii HOM05D001997 ORTHO05D004620 2.9e-160 569.7 648 49.8
Peaxi162Scf00375g00082 Petunia axillaris HOM05D001997 ORTHO05D004620 4.9e-160 568.9 651 50.8
TWI36G0125 Tripterygium wilfordii HOM05D001997 ORTHO05D004620 6.4e-160 568.5 649 49.9
Gorai.004G087500 Gossypium raimondii HOM05D001997 ORTHO05D004620 2.4e-159 566.6 649 49.6
FAN01G1889 Fragaria x ananassa HOM05D001997 ORTHO05D004620 9.2e-159 564.7 673 48.0
Sc19g0002180 Simmondsia chinensis HOM05D001997 ORTHO05D004620 4.6e-158 562.4 647 49.5
FvH4_7g14000 Fragaria vesca HOM05D001997 ORTHO05D004620 6.0e-158 562.0 673 47.8
Gohir.A08G074100 Gossypium hirsutum HOM05D001997 ORTHO05D004620 6.0e-158 562.0 649 49.6
Dinv05995 Davidia involucrata HOM05D001997 ORTHO05D004620 1.0e-157 561.2 649 49.5
Lsat_1_v5_gn_6_55020 Lactuca sativa HOM05D001997 ORTHO05D004620 1.0e-157 561.2 639 48.4
Nitab4.5_0010690g0010 Nicotiana tabacum HOM05D001997 ORTHO05D004620 1.0e-157 561.2 652 50.3
Actinidia35961 Actinidia chinensis HOM05D001997 ORTHO05D004620 1.3e-157 560.8 652 48.5
FAN10G2611 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.3e-157 560.8 673 48.0
FAN10G3464 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.3e-157 560.8 673 48.0
FAN06G3325 Fragaria x ananassa HOM05D001997 ORTHO05D004620 2.3e-157 560.1 673 48.0
FAN06G4213 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.9e-157 559.3 673 47.8
Sopen06g029850 Solanum pennellii HOM05D001997 ORTHO05D004620 5.0e-157 558.9 653 49.8
FAN03G0113 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.9e-156 557.0 673 47.5
PGSC0003DMG400026903 Solanum tuberosum HOM05D001997 ORTHO05D004620 3.3e-156 556.2 654 50.0
CiPaw.02G056300 Carya illinoinensis HOM05D001997 ORTHO05D004620 4.3e-156 555.8 633 49.8
Cc01_g08750 Coffea canephora HOM05D001997 ORTHO05D004620 5.6e-156 555.4 671 48.3
FAN10G4317 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.2e-155 554.3 673 47.8
CANSAT21G1219 Cannabis sativa HOM05D001997 ORTHO05D004620 2.1e-155 553.5 655 49.2
MD07G1139400 Malus domestica HOM05D001997 ORTHO05D004620 6.2e-155 552.0 660 47.9
Prupe.2G167200 Prunus persica HOM05D001997 ORTHO05D004620 1.8e-154 550.4 655 48.2
MSTRG.17660 Avicennia marina HOM05D001997 ORTHO05D004620 2.6e-153 546.6 659 46.4
PGR044G1365 Punica granatum HOM05D001997 ORTHO05D004620 6.4e-152 542.0 647 48.2
AUR62035000 Chenopodium quinoa HOM05D001997 ORTHO05D004620 1.1e-151 541.2 655 47.2
Oeu015677.2 Olea europaea HOM05D001997 ORTHO05D004620 1.6e-150 537.3 663 46.2
MSTRG.12412 Avicennia marina HOM05D001997 ORTHO05D004620 3.0e-149 533.1 659 46.6
HanXRQChr07g0186151 Helianthus annuus HOM05D001997 ORTHO05D004620 5.1e-149 532.3 643 47.6
HanXRQChr02g0057961 Helianthus annuus HOM05D001997 ORTHO05D004620 8.6e-149 531.6 640 47.0
CDE08G0116 Ceratophyllum demersum HOM05D001997 ORTHO05D004620 9.5e-148 528.1 626 48.2
ECA233G5997 Erigeron canadensis HOM05D001997 ORTHO05D004620 4.7e-147 525.8 648 46.9
THA.LOC104802304 Tarenaya hassleriana HOM05D001997 ORTHO05D004620 3.1e-146 523.1 658 47.4
Glyma.11G094600 Glycine max HOM05D001997 ORTHO05D004620 5.2e-146 522.3 634 47.5
Thecc.05G002900 Theobroma cacao HOM05D001997 ORTHO05D004620 9.9e-145 518.1 654 46.5
SGA_v2.0_scaffold16G07570 Striga asiatica HOM05D001997 ORTHO05D004620 4.9e-144 515.8 654 46.2
AT2G43250 Arabidopsis thaliana HOM05D001997 ORTHO05D004620 2.1e-142 510.4 654 46.0
Ah.05g167000 Amaranthus hybridus HOM05D001997 ORTHO05D004620 6.0e-142 508.8 641 46.5
Sp4g25380 Schrenkiella parvula HOM05D001997 ORTHO05D004620 7.8e-142 508.4 646 46.4
Lj3g0010188 Lotus japonicus HOM05D001997 ORTHO05D004620 1.7e-141 507.3 655 46.6
arahy.Tifrunner.gnm1.ann1.JTZ133 Arachis hypogaea HOM05D001997 ORTHO05D004620 5.1e-141 505.8 641 47.4
AUR62037461 Chenopodium quinoa HOM05D001997 ORTHO05D004620 5.1e-141 505.8 651 45.5
Phvul.011G023500 Phaseolus vulgaris HOM05D001997 ORTHO05D004620 8.6e-141 505.0 645 46.2
Thhalv10001801m.g Eutrema salsugineum HOM05D001997 ORTHO05D004620 1.1e-140 504.6 657 44.7
CARHR138340 Cardamine hirsuta HOM05D001997 ORTHO05D004620 3.6e-139 499.6 653 45.2
BraA04t18717Z Brassica rapa HOM05D001997 ORTHO05D004620 3.1e-138 496.5 638 46.2
VMungo1127G1251 Vigna mungo HOM05D001997 ORTHO05D004620 8.9e-138 495.0 635 46.5
Psat7g172720 Pisum sativum HOM05D001997 ORTHO05D004620 1.5e-137 494.2 649 45.9
A04p32530 Brassica napus HOM05D001997 ORTHO05D004620 2.0e-137 493.8 638 46.6
C04p70220 Brassica napus HOM05D001997 ORTHO05D004620 4.4e-137 492.7 638 46.4
Glyma.03G127700 Glycine max HOM05D001997 ORTHO05D004620 9.9e-137 491.5 644 45.3
BcaC02g07197 Brassica carinata HOM05D001997 ORTHO05D004620 2.9e-136 490.0 629 46.7
BolC4t28526H Brassica oleracea HOM05D001997 ORTHO05D004620 3.8e-136 489.6 629 46.7
HPP92_007608 Vanilla planifolia HOM05D001997 ORTHO05D004620 4.2e-135 486.1 649 44.7
TPR.G13756 Trifolium pratense HOM05D001997 ORTHO05D004620 5.4e-135 485.7 648 46.1
Ca_26058_v3 Cicer arietinum L. HOM05D001997 ORTHO05D004620 3.0e-133 479.9 651 45.3
Migut.N02417 Erythranthe guttata HOM05D001997 ORTHO05D004620 5.1e-133 479.2 669 44.2
arahy.Tifrunner.gnm1.ann1.7X5TTD Arachis hypogaea HOM05D001997 ORTHO05D004620 6.6e-133 478.8 636 44.3
BcaB06g29293 Brassica carinata HOM05D001997 ORTHO05D004620 3.3e-132 476.5 598 47.3
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 5.6e-132 475.7 641 44.1
AL4G41910 Arabidopsis lyrata HOM05D001997 ORTHO05D004620 7.3e-132 475.3 655 44.1
Ca_30128_v3 Cicer arietinum L. HOM05D001997 ORTHO05D004620 1.3e-131 474.6 640 45.6
ATR0743G280 Amborella trichopoda HOM05D001997 ORTHO05D004620 1.1e-130 471.5 658 45.9
Medtr4g076620 Medicago truncatula HOM05D001997 ORTHO05D004620 9.0e-130 468.4 634 44.6
Nitab4.5_0002368g0100 Nicotiana tabacum HOM05D001997 ORTHO05D004620 3.4e-129 466.5 574 48.8
Lj4g0020139 Lotus japonicus HOM05D001997 ORTHO05D004620 2.9e-128 463.4 631 44.1
Medtr4g076640 Medicago truncatula HOM05D001997 ORTHO05D004620 3.2e-127 459.9 641 43.8
unitig_22.g6172 Utricularia gibba HOM05D001997 ORTHO05D004620 1.7e-125 454.1 654 44.6
Zm00001eb425530 Zea mays HOM05D001997 ORTHO05D004620 2.8e-123 446.8 672 41.2
Os04g0490700 Oryza sativa ssp. japonica HOM05D001997 ORTHO05D004620 6.2e-123 445.7 671 41.3
DCAR_010832 Daucus carota HOM05D001997 ORTHO05D004620 3.4e-121 439.9 598 44.8
Nn5g27952 Nelumbo nucifera HOM05D001997 ORTHO05D004620 1.4e-119 434.5 521 48.2
TPR.G13749 Trifolium pratense HOM05D001997 ORTHO05D004620 4.2e-119 433.0 643 43.4
Glyma.12G021000 Glycine max HOM05D001997 ORTHO05D004620 5.5e-119 432.6 632 42.4
Haze_01373 Corylus avellana HOM05D001997 ORTHO05D004620 1.6e-118 431.0 630 41.6
Cfa015264 Carpinus fangiana HOM05D001997 ORTHO05D004620 1.8e-117 427.6 630 41.1
Sabra17G0022300 Salix brachista HOM05D001997 ORTHO05D004620 2.4e-114 417.2 592 44.3
SEGI_28245 Sequoiadendron giganteum HOM05D001997 ORTHO05D004620 8.4e-112 408.7 655 39.7
Carub.0004s2573 Capsella rubella HOM05D001997 ORTHO05D004620 1.2e-110 404.8 654 40.4
Gohir.D09G164700 Gossypium hirsutum HOM05D001997 ORTHO05D004620 2.1e-110 404.1 433 51.7
Solyc06g073490.2 Solanum lycopersicum HOM05D001997 ORTHO05D004620 6.0e-110 402.5 417 54.0
Eucgr.A00056 Eucalyptus grandis HOM05D001997 ORTHO05D004620 7.9e-110 402.1 419 53.7
Gohir.A09G169000 Gossypium hirsutum HOM05D001997 ORTHO05D004620 3.7e-107 393.3 433 51.0
Thhalv10001772m.g Eutrema salsugineum HOM05D001997 ORTHO05D004620 2.0e-97 360.9 645 38.0
Lalb_Chr01g0001101 Lupinus albus HOM05D001997 ORTHO05D004620 1.4e-93 348.2 402 50.0
C08p23950 Brassica napus HOM05D001997 ORTHO05D004620 1.7e-88 331.3 623 37.9
SalBow3G0527 Salvia bowleyana HOM05D001997 ORTHO05D004620 4.1e-82 310.1 349 51.3
BraA05t19355Z Brassica rapa HOM05D001997 ORTHO05D004620 2.6e-81 307.4 604 36.1
BolC8t50019H Brassica oleracea HOM05D001997 ORTHO05D004620 8.5e-80 302.4 621 35.4
BolC4t22066H Brassica oleracea HOM05D001997 ORTHO05D004620 1.1e-79 302.0 604 35.6
BcaC07g39373 Brassica carinata HOM05D001997 ORTHO05D004620 2.5e-79 300.8 604 35.9
A05p03690 Brassica napus HOM05D001997 ORTHO05D004620 4.2e-79 300.1 604 35.4
Glyma.19G130251 Glycine max HOM05D001997 ORTHO05D004620 5.5e-79 299.7 329 53.2
C04p04300 Brassica napus HOM05D001997 ORTHO05D004620 2.7e-78 297.4 604 35.4
Cpa.g.sc81.168 Carica papaya HOM05D001997 ORTHO05D004620 7.0e-74 282.7 656 32.0
A06p18770 Brassica napus HOM05D001997 ORTHO05D004620 7.7e-73 279.3 638 34.3
GSVIVG01013581001 Vitis vinifera HOM05D001997 ORTHO05D004620 1.9e-71 274.6 404 40.8
Mapoly0021s0032 Marchantia polymorpha HOM05D001997 ORTHO05D004620 3.0e-69 267.3 674 31.5
MD01G1056400 Malus domestica HOM05D001997 ORTHO05D004620 1.2e-68 265.4 439 38.5
FvH4_7g26521 Fragaria vesca HOM05D001997 ORTHO05D004620 2.8e-67 260.8 622 32.2
RcHm_v2.0_Chr1g0373181 Rosa chinensis HOM05D001997 ORTHO05D004620 1.8e-66 258.1 618 32.4
FAN06G2538 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.5e-60 238.4 621 31.6
FAN03G0465 Fragaria x ananassa HOM05D001997 ORTHO05D004620 9.2e-58 229.2 615 31.5
FAN10G3679 Fragaria x ananassa HOM05D001997 ORTHO05D004620 5.9e-57 226.5 427 36.3
BcaNung06617 Brassica carinata HOM05D001997 ORTHO05D004620 2.5e-55 221.1 602 31.4
FAN01G2316 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.2e-49 202.2 427 34.4
Pp3c13_12610 Physcomitrium patens HOM05D001997 ORTHO05D004620 4.3e-47 193.7 678 28.2
TPR.G11744 Trifolium pratense HOM05D001997 ORTHO05D004620 1.9e-42 178.3 314 39.8
Actinidia28986 Actinidia chinensis HOM05D001997 ORTHO05D004620 5.6e-39 166.8 242 45.5
BraA06t24958Z Brassica rapa HOM05D001997 ORTHO05D004620 1.2e-36 159.1 549 28.4
GSVIVG01013582001 Vitis vinifera HOM05D001997 ORTHO05D004620 1.5e-36 158.7 172 51.2
BcaB06g29296 Brassica carinata HOM05D001997 ORTHO05D004620 5.8e-36 156.8 191 51.8
CAN.G138.1 Capsicum annuum HOM05D001997 ORTHO05D004620 4.3e-31 140.6 114 60.5
BcaC07g39374 Brassica carinata HOM05D001997 ORTHO05D004620 4.7e-30 137.1 146 50.0
Lsat_1_v5_gn_5_125441 Lactuca sativa HOM05D001997 ORTHO05D004620 1.1e-29 136.0 124 59.7
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 1.4e-29 135.6 115 57.4
SHI06486 Sapria himalayana HOM05D002588 ORTHO05D002979 9.2e-26 122.9 110 56.4
CAN.G1014.21 Capsicum annuum HOM05D001997 ORTHO05D004620 6.6e-24 116.7 94 61.7
CAN.G765.4 Capsicum annuum HOM05D001997 ORTHO05D004620 9.6e-23 112.8 94 59.6
C04p70240 Brassica napus HOM05D001997 ORTHO05D004620 1.1e-21 109.4 95 58.9
Dinv44213 Davidia involucrata HOM05D001997 ORTHO05D004620 1.1e-21 109.4 72 69.4
BcaB01g03399 Brassica carinata HOM05D001997 ORTHO05D004620 4.0e-21 107.5 346 28.9
SMO356G0473 Selaginella moellendorffii HOM05D001997 ORTHO05D004620 4.0e-21 107.5 353 28.9
BcaB06g29294 Brassica carinata HOM05D001997 ORTHO05D004620 5.2e-21 107.1 157 43.9
MD01G1056500 Malus domestica HOM05D001997 ORTHO05D004620 2.9e-19 101.3 89 53.9
AagrBONN_evm.TU.Sc2ySwM_228.3298 Anthoceros agrestis HOM05D001997 ORTHO05D004620 1.4e-18 99.0 172 36.6
SalBow3G4162 Salvia bowleyana HOM05D001997 ORTHO05D004620 9.3e-18 96.3 87 51.7
BcaC02g07196 Brassica carinata HOM05D001997 ORTHO05D004620 7.8e-17 93.2 79 58.2
BcaB06g29295 Brassica carinata HOM05D001997 ORTHO05D004620 1.5e-15 89.0 79 57.0
BolC4t28530H Brassica oleracea HOM05D001997 ORTHO05D004620 1.9e-15 88.6 130 41.5
Medtr4g076610 Medicago truncatula HOM05D001997 ORTHO05D004620 1.9e-15 88.6 80 52.5
SGA_v2.0_scaffold4G02500 Striga asiatica HOM05D001997 ORTHO05D004620 1.3e-14 85.9 73 57.5
Actinidia11446 Actinidia chinensis HOM05D001997 ORTHO05D004620 3.6e-14 84.3 144 41.7
BolC4t28528H Brassica oleracea HOM05D001997 ORTHO05D004620 9.0e-13 79.7 98 48.0
TPR.G290 Trifolium pratense HOM05D001997 ORTHO05D004620 4.5e-12 77.4 51 72.5
C03p28740 Brassica napus HOM05D001997 ORTHO05D004620 1.6e-09 68.9 55 60.0
BcaC05g28816 Brassica carinata HOM05D001997 ORTHO05D004620 1.3e-08 65.9 80 43.8
BcaNung06616 Brassica carinata HOM05D001997 ORTHO05D004620 1.9e-07 62.0 81 43.2
SalBow3G4229 Salvia bowleyana HOM05D001997 ORTHO05D004620 1.3e-06 59.3 132 32.6
FAN10G4060 Fragaria x ananassa HOM05D001997 ORTHO05D004620 2.1e-06 58.5 52 55.8
C04p70260 Brassica napus HOM05D001997 ORTHO05D004620 3.7e-06 57.8 53 56.6


User provided reference genes

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