Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4363 Papaver somniferum HOM05D006954 ORTHO05D008729 1.6e-309 1065.4 610 100.0
PSO170G0413 Papaver somniferum HOM05D006954 ORTHO05D008729 2.1e-258 895.6 624 83.5
Dinv21639 Davidia involucrata HOM05D006954 ORTHO05D008729 1.6e-72 278.1 487 40.9
TAR375G1092 Trochodendron aralioides HOM05D006954 ORTHO05D008729 9.8e-70 268.9 510 41.6
TAR375G0455 Trochodendron aralioides HOM05D006954 ORTHO05D008729 1.2e-64 251.9 496 39.7
Aqoxy7G00762 Aquilegia oxysepala HOM05D006954 ORTHO05D008729 1.7e-58 231.5 684 38.2
Dinv43668 Davidia involucrata HOM05D006954 ORTHO05D008729 8.1e-56 222.6 426 39.0
QL12p012133 Quercus lobata HOM05D006954 ORTHO05D008729 2.7e-51 207.6 390 37.2
Rhsim07G0108500 Rhododendron simsii HOM05D001088 ORTHO05D002099 4.6e-51 206.8 505 36.0
Manes.01G080700 Manihot esculenta HOM05D006954 ORTHO05D008729 2.3e-50 204.5 529 38.2
Cfa011147 Carpinus fangiana HOM05D001088 ORTHO05D002099 3.0e-50 204.1 464 35.8
MD07G1114400 Malus domestica HOM05D006954 ORTHO05D008729 2.2e-45 188.0 459 35.3
Haze_02712 Corylus avellana HOM05D006954 ORTHO05D008729 6.4e-45 186.4 351 39.3
Prupe.2G137000 Prunus persica HOM05D006954 ORTHO05D008729 8.4e-45 186.0 463 34.1
MD02G1210900 Malus domestica HOM05D006954 ORTHO05D008729 2.4e-44 184.5 566 35.5
Thecc.01G384400 Theobroma cacao HOM05D006954 ORTHO05D008729 4.2e-44 183.7 458 33.6
MBI04_g09501_MAGBIO Magnolia biondii HOM05D006954 ORTHO05D008729 2.7e-43 181.0 406 36.0
Actinidia27466 Actinidia chinensis HOM05D001088 ORTHO05D002099 4.6e-43 180.3 433 36.3
CiPaw.14G025200 Carya illinoinensis HOM05D006954 ORTHO05D008729 4.6e-43 180.3 410 35.4
vmacro14083 Vaccinium macrocarpon HOM05D006954 ORTHO05D008729 1.0e-42 179.1 355 37.7
Hma1.2p1_0316F.1_g123150 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 3.9e-42 177.2 486 33.1
FAN01G1544 Fragaria x ananassa HOM05D006954 ORTHO05D008729 1.9e-41 174.9 400 35.8
FAN03G1627 Fragaria x ananassa HOM05D006954 ORTHO05D008729 5.6e-41 173.3 442 33.3
Ciclev10019520m.g Citrus clementina HOM05D006954 ORTHO05D008729 9.6e-41 172.6 510 31.0
DCAR_006832 Daucus carota HOM05D001088 ORTHO05D002099 9.6e-41 172.6 470 33.8
Duzib133G0753 Durio zibethinus HOM05D006954 ORTHO05D008729 9.6e-41 172.6 343 36.7
FAN06G1022 Fragaria x ananassa HOM05D006954 ORTHO05D008729 9.6e-41 172.6 374 35.8
FAN10G2562 Fragaria x ananassa HOM05D006954 ORTHO05D008729 9.6e-41 172.6 376 36.2
COL.COLO4_12483 Corchorus olitorius HOM05D006954 ORTHO05D008729 1.6e-40 171.8 350 35.4
FAN10G3525 Fragaria x ananassa HOM05D006954 ORTHO05D008729 2.8e-40 171.0 376 35.9
FAN06G0609 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.6e-40 170.6 375 36.0
TWI59G0609 Tripterygium wilfordii HOM05D006954 ORTHO05D008729 8.1e-40 169.5 497 32.8
QL04p036098 Quercus lobata HOM05D006954 ORTHO05D008729 2.4e-39 167.9 348 37.4
Atru.chr5.233 Acer truncatum HOM05D006954 ORTHO05D008729 3.1e-39 167.5 280 40.0
QL04p036667 Quercus lobata HOM05D006954 ORTHO05D008729 9.0e-39 166.0 574 33.3
QL04p036448 Quercus lobata HOM05D006954 ORTHO05D008729 7.6e-38 162.9 497 32.4
RcHm_v2.0_Chr1g0349021 Rosa chinensis HOM05D006954 ORTHO05D008729 1.7e-37 161.8 401 33.7
Nn6g33957 Nelumbo nucifera HOM05D006954 ORTHO05D008729 8.4e-37 159.5 432 37.3
PGSC0003DMG400026019 Solanum tuberosum HOM05D006954 ORTHO05D008729 6.0e-35 153.3 426 30.0
TAR636G1544 Trochodendron aralioides HOM05D006954 ORTHO05D008729 6.0e-35 153.3 181 49.2
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 1.0e-34 152.5 265 37.7
Sopen01g036590 Solanum pennellii HOM05D006954 ORTHO05D008729 8.7e-34 149.4 367 31.9
Oeu031219.1 Olea europaea HOM05D006954 ORTHO05D008729 1.1e-33 149.1 256 38.3
Duzib205G0178 Durio zibethinus HOM05D006954 ORTHO05D008729 1.5e-33 148.7 422 32.5
Oeu026406.1 Olea europaea HOM05D006954 ORTHO05D008729 1.5e-33 148.7 357 34.2
Glyma.11G167382 Glycine max HOM05D006954 ORTHO05D008729 7.4e-33 146.4 392 32.1
Solyc01g090850.3 Solanum lycopersicum HOM05D006954 ORTHO05D008729 9.6e-33 146.0 361 31.9
AUR62013686 Chenopodium quinoa HOM05D006954 ORTHO05D008729 2.8e-32 144.4 275 39.6
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 2.8e-32 144.4 389 32.1
AUR62004161 Chenopodium quinoa HOM05D006954 ORTHO05D008729 3.7e-32 144.1 314 37.3
Gohir.A07G147000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 3.7e-32 144.1 252 39.3
CDE11G0492 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 1.1e-31 142.5 414 34.1
Duzib136G0004 Durio zibethinus HOM05D006954 ORTHO05D008729 1.1e-31 142.5 422 32.0
Gohir.D07G153000 Gossypium hirsutum HOM05D006954 ORTHO05D008729 3.1e-31 141.0 335 33.4
Lj2A217G32 Lonicera japonica HOM05D006954 ORTHO05D008729 2.0e-30 138.3 467 30.6
CAN.G1872.2 Capsicum annuum HOM05D006954 ORTHO05D008729 2.6e-30 137.9 359 33.1
Oeu009770.1 Olea europaea HOM05D006954 ORTHO05D008729 2.6e-30 137.9 275 36.7
Peaxi162Scf00803g00025 Petunia axillaris HOM05D006954 ORTHO05D008729 4.5e-30 137.1 347 33.7
Hma1.2p1_0041F.1_g025380 Hydrangea macrophylla HOM05D006954 ORTHO05D008729 5.8e-30 136.7 223 37.7
Lj8P262T33 Lonicera japonica HOM05D006954 ORTHO05D008729 5.8e-30 136.7 327 32.7
Gorai.001G175100 Gossypium raimondii HOM05D006954 ORTHO05D008729 1.0e-29 136.0 339 32.7
HanXRQChr16g0511611 Helianthus annuus HOM05D006954 ORTHO05D008729 2.2e-29 134.8 426 31.0
Rhsim07G0031700 Rhododendron simsii HOM05D001088 ORTHO05D002099 3.8e-29 134.0 273 35.5
ECA233G0962 Erigeron canadensis HOM05D006954 ORTHO05D008729 6.5e-29 133.3 257 36.2
Nitab4.5_0011151g0020 Nicotiana tabacum HOM05D006954 ORTHO05D008729 6.5e-29 133.3 368 31.5
Lj6C70T9 Lonicera japonica HOM05D006954 ORTHO05D008729 8.4e-29 132.9 361 33.2
EL10Ac1g00835 Beta vulgaris HOM05D006954 ORTHO05D008729 2.5e-28 131.3 285 35.8
Hund17048 Selenicereus undatus HOM05D006954 ORTHO05D008729 2.1e-27 128.3 273 35.9
PSO675G5217 Papaver somniferum HOM05D000093 ORTHO05D000835 2.7e-27 127.9 83 81.9
Nitab4.5_0000859g0170 Nicotiana tabacum HOM05D006954 ORTHO05D008729 6.0e-27 126.7 400 30.8
Ah.05g173790 Amaranthus hybridus HOM05D006954 ORTHO05D008729 1.0e-26 125.9 296 35.1
Lalb_Chr07g0190311 Lupinus albus HOM05D006954 ORTHO05D008729 6.7e-26 123.2 361 30.5
Lalb_Chr01g0021361 Lupinus albus HOM05D006954 ORTHO05D008729 1.9e-25 121.7 450 30.7
Glyma.01G134400 Glycine max HOM05D006954 ORTHO05D008729 4.3e-25 120.6 252 34.5
Prupe.5G069800 Prunus persica HOM05D006954 ORTHO05D008729 5.7e-25 120.2 388 31.2
RcHm_v2.0_Chr7g0203321 Rosa chinensis HOM05D006954 ORTHO05D008729 1.3e-24 119.0 365 31.0
Eucgr.E00424 Eucalyptus grandis HOM05D006954 ORTHO05D008729 6.3e-24 116.7 359 30.1
Sc02g0002800 Simmondsia chinensis HOM05D006954 ORTHO05D008729 1.8e-23 115.2 261 36.0
arahy.Tifrunner.gnm1.ann1.UR8A7Q Arachis hypogaea HOM05D006954 ORTHO05D008729 5.3e-23 113.6 319 32.3
Ca_19859_v3 Cicer arietinum L. HOM05D006954 ORTHO05D008729 5.3e-23 113.6 329 31.6
HPP92_008568 Vanilla planifolia HOM05D006954 ORTHO05D008729 5.3e-23 113.6 391 29.4
Glyma.03G033300 Glycine max HOM05D006954 ORTHO05D008729 9.0e-23 112.8 360 30.8
Phvul.010G071500 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 1.5e-22 112.1 327 30.6
CDE09G0910 Ceratophyllum demersum HOM05D006954 ORTHO05D008729 2.0e-22 111.7 414 31.2
arahy.Tifrunner.gnm1.ann1.LN378K Arachis hypogaea HOM05D006954 ORTHO05D008729 1.7e-21 108.6 319 31.7
FvH4_5g18930 Fragaria vesca HOM05D006954 ORTHO05D008729 2.2e-21 108.2 346 30.3
Psat0s3685g0160 Pisum sativum HOM05D006954 ORTHO05D008729 2.2e-21 108.2 365 32.1
FAN18G2950 Fragaria x ananassa HOM05D006954 ORTHO05D008729 5.0e-21 107.1 346 30.3
FAN04G0536 Fragaria x ananassa HOM05D006954 ORTHO05D008729 8.5e-21 106.3 339 29.2
COL.COLO4_37173 Corchorus olitorius HOM05D006954 ORTHO05D008729 1.9e-20 105.1 449 26.9
FAN13G0002 Fragaria x ananassa HOM05D006954 ORTHO05D008729 3.2e-20 104.4 341 29.0
VMungo1383G2724 Vigna mungo HOM05D006954 ORTHO05D008729 3.2e-20 104.4 333 27.9
Phvul.008G143700 Phaseolus vulgaris HOM05D006954 ORTHO05D008729 1.2e-19 102.4 325 28.6
SHI20280 Sapria himalayana HOM05D006954 ORTHO05D008729 1.2e-19 102.4 337 28.5
SalBow5G1520 Salvia bowleyana HOM05D006954 ORTHO05D008729 2.7e-19 101.3 344 30.5
PGR042G3906 Punica granatum HOM05D006954 ORTHO05D008729 4.6e-19 100.5 216 30.1
Lj3g0019070 Lotus japonicus HOM05D006954 ORTHO05D008729 3.9e-18 97.4 330 28.8
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 1.5e-17 95.5 267 28.1
PSO384G1480 Papaver somniferum HOM05D000626 ORTHO05D000824 1.9e-17 95.1 54 88.9
Lsat_1_v5_gn_7_8881 Lactuca sativa HOM05D006954 ORTHO05D008729 5.7e-17 93.6 272 27.6
Nitab4.5_0000618g0050 Nicotiana tabacum HOM05D020458 ORTHO05D022160 1.3e-16 92.4 232 30.6
PSO017G6547 Papaver somniferum HOM05D001325 ORTHO05D001540 6.3e-16 90.1 51 84.3
ECA236G3196 Erigeron canadensis HOM05D006954 ORTHO05D008729 8.2e-16 89.7 236 31.4
Thecc.03G251300 Theobroma cacao HOM05D006954 ORTHO05D008729 3.1e-15 87.8 108 43.5
HanXRQChr06g0168891 Helianthus annuus HOM05D006954 ORTHO05D008729 4.1e-15 87.4 231 29.0
HanXRQChr06g0169051 Helianthus annuus HOM05D006954 ORTHO05D008729 4.1e-15 87.4 231 29.0
Lj9P565T15 Lonicera japonica HOM05D006954 ORTHO05D008729 5.3e-15 87.0 79 49.4
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 5.3e-15 87.0 418 27.0
Zm00001eb023500 Zea mays HOM05D006954 ORTHO05D008729 4.5e-14 84.0 478 25.7
Nitab4.5_0001076g0060 Nicotiana tabacum HOM05D020458 ORTHO05D022160 5.9e-14 83.6 233 30.0
PGSC0003DMG400011881 Solanum tuberosum HOM05D020458 ORTHO05D022160 2.5e-12 78.2 131 35.1
Sopen06g020850 Solanum pennellii HOM05D020458 ORTHO05D022160 5.5e-12 77.0 131 37.4
arahy.Tifrunner.gnm1.ann1.7WP6A4 Arachis hypogaea HOM05D006954 ORTHO05D008729 7.2e-12 76.6 242 24.8
Solyc06g060730.3 Solanum lycopersicum HOM05D020458 ORTHO05D022160 7.2e-12 76.6 154 36.4
arahy.Tifrunner.gnm1.ann1.ADMQ1S Arachis hypogaea HOM05D006954 ORTHO05D008729 9.4e-12 76.3 244 24.2
Zm00001eb391500 Zea mays HOM05D006954 ORTHO05D008729 1.0e-10 72.8 441 26.1
ATR0317G083 Amborella trichopoda HOM05D006954 ORTHO05D008729 3.3e-09 67.8 348 29.0
Ah.11g047990 Amaranthus hybridus HOM05D005220 ORTHO05D006082 1.1e-07 62.8 249 25.7
TAR636G1204 Trochodendron aralioides HOM05D005220 ORTHO05D006082 1.4e-07 62.4 219 26.9
TAR374G0076 Trochodendron aralioides HOM05D005220 ORTHO05D006082 1.8e-07 62.0 236 24.2
TAR622G0939 Trochodendron aralioides HOM05D005220 ORTHO05D006082 9.1e-07 59.7 226 23.9
MSTRG.3015 Avicennia marina HOM05D005220 ORTHO05D006082 3.4e-06 57.8 267 24.7
Cfa019301 Carpinus fangiana HOM05D005220 ORTHO05D006082 3.4e-06 57.8 203 25.6
Hma1.2p1_0481F.1_g161950 Hydrangea macrophylla HOM05D005220 ORTHO05D006082 4.5e-06 57.4 203 26.1
PSO302G0007 Papaver somniferum HOM05D005220 ORTHO05D006082 4.5e-06 57.4 205 24.4
TAR629G0541 Trochodendron aralioides HOM05D005220 ORTHO05D006082 5.9e-06 57.0 200 26.0


User provided reference genes

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