Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4293 Papaver somniferum HOM05D004917 ORTHO05D005954 1.4e-113 412.9 205 100.0
PSO170G4503 Papaver somniferum HOM05D004917 ORTHO05D005954 2.3e-108 395.6 205 96.1
PSO170G3322 Papaver somniferum HOM05D004917 ORTHO05D005954 7.8e-96 354.0 204 86.3
PSO017G2694 Papaver somniferum HOM05D004917 ORTHO05D005954 8.6e-95 350.5 200 86.5
PSO017G2968 Papaver somniferum HOM05D004917 ORTHO05D005954 7.6e-91 337.4 206 83.0
PSO170G3850 Papaver somniferum HOM05D004917 ORTHO05D005954 4.6e-88 328.2 206 82.0
Duzib147G0189 Durio zibethinus HOM05D004917 ORTHO05D005954 4.5e-83 311.6 201 75.1
FvH4_1g18250 Fragaria vesca HOM05D004917 ORTHO05D005954 1.3e-82 310.1 205 75.1
GSVIVG01004399001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.7e-82 309.7 202 74.8
Prupe.6G216800 Prunus persica HOM05D004917 ORTHO05D005954 3.8e-82 308.5 201 75.6
Actinidia16409 Actinidia chinensis HOM05D004917 ORTHO05D005954 4.9e-82 308.1 202 73.3
Hma1.2p1_0424F.1_g150480 Hydrangea macrophylla HOM05D004917 ORTHO05D005954 1.1e-81 307.0 201 74.1
RcHm_v2.0_Chr2g0108761 Rosa chinensis HOM05D004917 ORTHO05D005954 1.4e-81 306.6 205 74.1
vmacro18012 Vaccinium macrocarpon HOM05D004917 ORTHO05D005954 1.4e-81 306.6 201 73.1
TAR628G1580 Trochodendron aralioides HOM05D004917 ORTHO05D005954 2.4e-81 305.8 198 74.7
COL.COLO4_11616 Corchorus olitorius HOM05D004917 ORTHO05D005954 3.2e-81 305.4 201 72.6
Rhsim08G0090300 Rhododendron simsii HOM05D004917 ORTHO05D005954 4.2e-81 305.1 200 73.5
Manes.13G109000 Manihot esculenta HOM05D004917 ORTHO05D005954 5.4e-81 304.7 198 73.7
FAN23G1748 Fragaria x ananassa HOM05D004917 ORTHO05D005954 9.3e-81 303.9 199 73.9
Aqoxy1G00260 Aquilegia oxysepala HOM05D004917 ORTHO05D005954 1.6e-80 303.1 193 75.1
Ca_22095_v3 Cicer arietinum L. HOM05D004917 ORTHO05D005954 2.7e-80 302.4 203 72.9
Sc07g0000430 Simmondsia chinensis HOM05D004917 ORTHO05D005954 2.7e-80 302.4 197 72.6
CANSAT01G2436 Cannabis sativa HOM05D004917 ORTHO05D005954 3.5e-80 302.0 193 75.6
FAN19G2004 Fragaria x ananassa HOM05D004917 ORTHO05D005954 4.6e-80 301.6 196 76.0
Gohir.D10G098900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 6.0e-80 301.2 200 73.0
Cc07_g07360 Coffea canephora HOM05D004917 ORTHO05D005954 7.9e-80 300.8 195 73.3
Sabra14G0006700 Salix brachista HOM05D004917 ORTHO05D005954 1.0e-79 300.4 205 70.7
Atru.chr3.1060 Acer truncatum HOM05D004917 ORTHO05D005954 1.3e-79 300.1 192 74.0
Gorai.011G108500 Gossypium raimondii HOM05D004917 ORTHO05D005954 1.8e-79 299.7 200 72.5
Psat4g080360 Pisum sativum HOM05D004917 ORTHO05D005954 1.8e-79 299.7 201 72.1
FvH4_1g18230 Fragaria vesca HOM05D004917 ORTHO05D005954 3.0e-79 298.9 205 71.7
FAN19G0182 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.0e-79 298.9 205 71.7
FAN26G0787 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.0e-79 298.9 205 72.7
Potri.014G012100 Populus trichocarpa HOM05D004917 ORTHO05D005954 3.0e-79 298.9 205 71.2
CsaV3_2G016370 Cucumis sativus L. HOM05D004917 ORTHO05D005954 3.9e-79 298.5 201 71.6
Gohir.A10G089200 Gossypium hirsutum HOM05D004917 ORTHO05D005954 6.7e-79 297.7 200 72.0
Medtr4g097500 Medicago truncatula HOM05D004917 ORTHO05D005954 1.1e-78 297.0 196 71.9
QL06p038930 Quercus lobata HOM05D004917 ORTHO05D005954 1.1e-78 297.0 201 69.7
RcHm_v2.0_Chr2g0108751 Rosa chinensis HOM05D004917 ORTHO05D005954 1.1e-78 297.0 201 72.6
Sed0017274 Sechium edule HOM05D004917 ORTHO05D005954 1.1e-78 297.0 198 72.2
SalBow5G1886 Salvia bowleyana HOM05D004917 ORTHO05D005954 3.3e-78 295.4 200 70.5
Eucgr.H02332 Eucalyptus grandis HOM05D004917 ORTHO05D005954 4.3e-78 295.0 202 70.8
MD02G1189600 Malus domestica HOM05D004917 ORTHO05D005954 4.3e-78 295.0 195 72.8
GSVIVG01007444001 Vitis vinifera HOM05D004917 ORTHO05D005954 4.3e-78 295.0 199 71.9
Lj4g0024725 Lotus japonicus HOM05D004917 ORTHO05D005954 9.6e-78 293.9 206 70.9
Cpa.g.sc673.2 Carica papaya HOM05D004917 ORTHO05D005954 1.6e-77 293.1 198 71.2
Nn5g30667 Nelumbo nucifera HOM05D004917 ORTHO05D005954 1.6e-77 293.1 199 72.9
VMungo0251G1412 Vigna mungo HOM05D004917 ORTHO05D005954 1.6e-77 293.1 202 70.8
Ciclev10026314m.g Citrus clementina HOM05D004917 ORTHO05D005954 3.6e-77 292.0 198 71.2
Glyma.17G158500 Glycine max HOM05D004917 ORTHO05D005954 6.2e-77 291.2 206 68.9
Thecc.01G076300 Theobroma cacao HOM05D004917 ORTHO05D005954 6.2e-77 291.2 202 69.3
COL.COLO4_11615 Corchorus olitorius HOM05D004917 ORTHO05D005954 8.1e-77 290.8 204 68.1
FvH4_1g18251 Fragaria vesca HOM05D004917 ORTHO05D005954 8.1e-77 290.8 199 70.4
TWI74G1062 Tripterygium wilfordii HOM05D004917 ORTHO05D005954 8.1e-77 290.8 194 70.1
Glyma.17G158400 Glycine max HOM05D004917 ORTHO05D005954 3.1e-76 288.9 206 69.4
Thecc.01G076400 Theobroma cacao HOM05D004917 ORTHO05D005954 3.1e-76 288.9 201 70.1
Cfa004388 Carpinus fangiana HOM05D004917 ORTHO05D005954 4.0e-76 288.5 196 69.4
Phvul.003G232900 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 5.3e-76 288.1 202 69.3
Os03g0729200 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 1.2e-75 287.0 197 70.6
PGSC0003DMG400003322 Solanum tuberosum HOM05D004917 ORTHO05D005954 1.2e-75 287.0 200 68.5
Eucgr.H02333 Eucalyptus grandis HOM05D004917 ORTHO05D005954 1.5e-75 286.6 200 70.0
Gorai.008G085700 Gossypium raimondii HOM05D004917 ORTHO05D005954 3.4e-75 285.4 197 67.0
Sopen02g014680 Solanum pennellii HOM05D004917 ORTHO05D005954 4.5e-75 285.0 200 68.5
Gohir.D12G076900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 9.9e-75 283.9 197 66.5
Lsat_1_v5_gn_4_160020 Lactuca sativa HOM05D004917 ORTHO05D005954 9.9e-75 283.9 204 68.6
Phvul.003G232800 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 1.3e-74 283.5 202 68.3
EL10Ac6g15593 Beta vulgaris HOM05D004917 ORTHO05D005954 1.7e-74 283.1 186 68.8
Migut.L00432 Erythranthe guttata HOM05D004917 ORTHO05D005954 2.2e-74 282.7 195 67.7
PGR102G2131 Punica granatum HOM05D004917 ORTHO05D005954 3.8e-74 282.0 200 67.0
arahy.Tifrunner.gnm1.ann1.1K25L2 Arachis hypogaea HOM05D004917 ORTHO05D005954 4.9e-74 281.6 204 66.7
Thhalv10004770m.g Eutrema salsugineum HOM05D004917 ORTHO05D005954 6.4e-74 281.2 194 66.0
FAN28G2407 Fragaria x ananassa HOM05D004917 ORTHO05D005954 6.4e-74 281.2 197 69.0
Sp2g28930 Schrenkiella parvula HOM05D004917 ORTHO05D005954 8.4e-74 280.8 200 66.5
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.1e-73 280.4 201 65.2
THA.LOC104827747 Tarenaya hassleriana HOM05D004917 ORTHO05D005954 1.9e-73 279.6 205 64.9
AUR62007540 Chenopodium quinoa HOM05D004917 ORTHO05D005954 2.4e-73 279.3 191 67.5
HanXRQChr09g0262071 Helianthus annuus HOM05D004917 ORTHO05D005954 2.4e-73 279.3 200 66.0
AL8G43550 Arabidopsis lyrata HOM05D004917 ORTHO05D005954 3.2e-73 278.9 195 65.1
arahy.Tifrunner.gnm1.ann1.UB5R5Q Arachis hypogaea HOM05D004917 ORTHO05D005954 3.2e-73 278.9 198 66.7
CiPaw.01G001900 Carya illinoinensis HOM05D004917 ORTHO05D005954 3.2e-73 278.9 196 67.3
SEGI_14750 Sequoiadendron giganteum HOM05D004917 ORTHO05D005954 7.1e-73 277.7 187 69.0
Zm00001eb215580 Zea mays HOM05D004917 ORTHO05D005954 7.1e-73 277.7 204 65.7
AT5G65840 Arabidopsis thaliana HOM05D004917 ORTHO05D005954 1.2e-72 276.9 195 64.6
CAN.G775.1 Capsicum annuum HOM05D004917 ORTHO05D005954 1.6e-72 276.6 202 65.8
CARHR279840 Cardamine hirsuta HOM05D004917 ORTHO05D005954 1.6e-72 276.6 194 64.9
VMungo0251G2665 Vigna mungo HOM05D004917 ORTHO05D005954 1.6e-72 276.6 202 67.3
A09p09210 Brassica napus HOM05D004917 ORTHO05D005954 2.1e-72 276.2 194 66.0
ECA232G4556 Erigeron canadensis HOM05D004917 ORTHO05D005954 3.5e-72 275.4 202 66.3
BraA09t36573Z Brassica rapa HOM05D004917 ORTHO05D005954 6.0e-72 274.6 192 65.6
Lalb_Chr11g0075991 Lupinus albus HOM05D004917 ORTHO05D005954 7.9e-72 274.2 210 67.1
BcaB04g20033 Brassica carinata HOM05D004917 ORTHO05D005954 1.0e-71 273.9 189 66.1
BcaB04g20036 Brassica carinata HOM05D004917 ORTHO05D005954 1.0e-71 273.9 189 66.1
AUR62004032 Chenopodium quinoa HOM05D004917 ORTHO05D005954 1.0e-71 273.9 191 67.0
Carub.0008s2673 Capsella rubella HOM05D004917 ORTHO05D005954 1.8e-71 273.1 201 63.7
SGA_v2.0_scaffold79G25603 Striga asiatica HOM05D004917 ORTHO05D005954 3.9e-71 271.9 191 68.1
BcaC04g23243 Brassica carinata HOM05D004917 ORTHO05D005954 5.1e-71 271.6 189 65.6
C09p10750 Brassica napus HOM05D004917 ORTHO05D005954 8.7e-71 270.8 199 63.3
BolC9t53970H Brassica oleracea HOM05D004917 ORTHO05D005954 2.5e-70 269.2 189 65.1
Lj4A165T49 Lonicera japonica HOM05D004917 ORTHO05D005954 1.3e-69 266.9 205 64.9
FAN26G1896 Fragaria x ananassa HOM05D004917 ORTHO05D005954 2.1e-69 266.2 204 66.2
ATR0739G130 Amborella trichopoda HOM05D004917 ORTHO05D005954 6.2e-69 264.6 193 65.8
Ah.03g140710 Amaranthus hybridus HOM05D004917 ORTHO05D005954 1.1e-68 263.8 192 64.6
ClCG02G012210 Citrullus lanatus HOM05D004917 ORTHO05D005954 1.4e-68 263.5 203 65.5
DCAR_014953 Daucus carota HOM05D004917 ORTHO05D005954 1.8e-68 263.1 206 63.1
RcHm_v2.0_Chr2g0108771 Rosa chinensis HOM05D004917 ORTHO05D005954 1.8e-68 263.1 202 67.3
GSVIVG01007168001 Vitis vinifera HOM05D004917 ORTHO05D005954 2.0e-67 259.6 160 77.5
MELO3C020846.2 Cucumis melo HOM05D004917 ORTHO05D005954 3.4e-67 258.8 198 64.6
Os03g0729300 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 4.5e-67 258.5 196 63.8
Migut.L00430 Erythranthe guttata HOM05D004917 ORTHO05D005954 3.8e-66 255.4 193 65.3
Oeu013341.1 Olea europaea HOM05D004917 ORTHO05D005954 4.2e-65 251.9 156 74.4
Haze_15025 Corylus avellana HOM05D004917 ORTHO05D005954 5.5e-65 251.5 195 61.0
CSS0005558 Camellia sinensis var. sinensis HOM05D004917 ORTHO05D005954 7.9e-64 247.7 192 62.5
Dinv26959 Davidia involucrata HOM05D004917 ORTHO05D005954 1.3e-63 246.9 162 75.9
CDE02G4371 Ceratophyllum demersum HOM05D004917 ORTHO05D005954 1.5e-62 243.4 190 59.5
Nitab4.5_0000036g0150 Nicotiana tabacum HOM05D004917 ORTHO05D005954 3.7e-61 238.8 155 70.3
DCAR_000455 Daucus carota HOM05D004917 ORTHO05D005954 4.8e-61 238.4 161 67.7
Peaxi162Scf00449g00417 Petunia axillaris HOM05D004917 ORTHO05D005954 1.8e-55 219.9 202 56.9
MBI16_g06077_MAGBIO Magnolia biondii HOM05D004917 ORTHO05D005954 7.4e-54 214.5 209 55.5
Nitab4.5_0007379g0030 Nicotiana tabacum HOM05D004917 ORTHO05D005954 6.9e-52 208.0 196 54.6
Hund16417 Selenicereus undatus HOM05D004917 ORTHO05D005954 5.0e-50 201.8 136 69.9
Pp3c27_7100 Physcomitrium patens HOM05D004917 ORTHO05D005954 7.2e-49 198.0 183 47.5
unitig_37.g11996 Utricularia gibba HOM05D004917 ORTHO05D005954 3.0e-47 192.6 141 66.7
FAN23G2689 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.5e-46 190.3 151 64.2
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis HOM05D004917 ORTHO05D005954 7.4e-46 188.0 185 46.5
Zm00001eb056030 Zea mays HOM05D004917 ORTHO05D005954 5.5e-41 171.8 127 60.6
QL06p038908 Quercus lobata HOM05D004917 ORTHO05D005954 7.0e-36 154.8 102 70.6
ATR0739G160 Amborella trichopoda HOM05D004917 ORTHO05D005954 9.1e-36 154.5 104 66.3
GSVIVG01007167001 Vitis vinifera HOM05D004917 ORTHO05D005954 7.7e-35 151.4 93 79.6
GSVIVG01004400001 Vitis vinifera HOM05D004917 ORTHO05D005954 2.1e-32 143.3 103 65.0
QL02p069743 Quercus lobata HOM05D004917 ORTHO05D005954 3.0e-31 139.4 104 66.3
QL06p038910 Quercus lobata HOM05D004917 ORTHO05D005954 5.7e-30 135.2 95 69.5
FAN26G2723 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.5e-25 120.6 191 38.2
FAN28G0406 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.8e-23 113.6 96 56.2
MCO14G127 Micromonas commoda HOM05D004917 ORTHO05D005954 2.6e-22 109.8 167 34.7
Carub.0004s1915 Capsella rubella HOM05D007024 ORTHO05D008865 4.1e-20 102.4 202 32.7
ECA238G1489 Erigeron canadensis HOM05D007024 ORTHO05D008865 5.9e-19 98.6 199 31.7
Lsat_1_v5_gn_2_109921 Lactuca sativa HOM05D007024 ORTHO05D008865 7.7e-19 98.2 203 32.5
HanXRQChr05g0129231 Helianthus annuus HOM05D007024 ORTHO05D008865 1.0e-18 97.8 204 30.4
SMO353G0397 Selaginella moellendorffii HOM05D007024 ORTHO05D008865 1.7e-18 97.1 176 35.2
HPP92_003601 Vanilla planifolia HOM05D007024 ORTHO05D008865 7.2e-17 91.7 199 30.2
CSS0004845 Camellia sinensis var. sinensis HOM05D007024 ORTHO05D008865 1.6e-16 90.5 189 31.2
arahy.Tifrunner.gnm1.ann1.F27BB1 Arachis hypogaea HOM05D004917 ORTHO05D005954 2.1e-16 90.1 84 56.0
Zm00001eb030360 Zea mays HOM05D004917 ORTHO05D005954 3.6e-16 89.4 54 81.5
AagrBONN_evm.TU.Sc2ySwM_344.3825 Anthoceros agrestis HOM05D007024 ORTHO05D008865 4.4e-14 82.4 128 35.2
Mapoly0154s0013 Marchantia polymorpha HOM05D007024 ORTHO05D008865 4.4e-14 82.4 198 29.8
PRCOL_00004664 Prasinoderma coloniale HOM05D004917 ORTHO05D005954 4.4e-14 82.4 136 33.8
CDE04G0730 Ceratophyllum demersum HOM05D007024 ORTHO05D008865 9.8e-14 81.3 208 28.8
Potri.007G007201 Populus trichocarpa HOM05D004917 ORTHO05D005954 1.3e-13 80.9 68 60.3
Cre17.g697050 Chlamydomonas reinhardtii HOM05D004917 ORTHO05D005954 4.9e-13 79.0 233 27.5
MCO06G061 Micromonas commoda HOM05D004917 ORTHO05D005954 8.3e-13 78.2 144 33.3
Sabra07G0005500 Salix brachista HOM05D004917 ORTHO05D005954 1.2e-11 74.3 100 48.0
MCO07G374 Micromonas commoda HOM05D004917 ORTHO05D005954 2.5e-09 66.6 82 42.7
Gohir.A12G080465 Gossypium hirsutum HOM05D004917 ORTHO05D005954 5.6e-09 65.5 55 60.0
Haze_02356 Corylus avellana HOM05D004917 ORTHO05D005954 9.5e-09 64.7 37 81.1
ATR0739G073 Amborella trichopoda HOM05D004917 ORTHO05D005954 1.6e-08 63.9 52 57.7
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 2.1e-08 63.5 118 33.1
GSVIVG01007445001 Vitis vinifera HOM05D004917 ORTHO05D005954 2.6e-06 56.6 52 55.8


User provided reference genes

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