Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4284 Papaver somniferum HOM05D002563 ORTHO05D008422 5.8e-68 260.8 131 100.0
PSO349G0182 Papaver somniferum HOM05D002563 ORTHO05D008422 3.0e-24 115.5 64 85.9
PSO765G0005 Papaver somniferum HOM05D002563 ORTHO05D008422 5.6e-23 111.3 64 84.4
Eucgr.B04000 Eucalyptus grandis HOM05D002563 ORTHO05D008422 1.0e-19 100.5 64 70.3
Sabra09G0059500 Salix brachista HOM05D002563 ORTHO05D008422 1.0e-19 100.5 64 70.3
TAR623G0598 Trochodendron aralioides HOM05D002563 ORTHO05D008422 1.0e-19 100.5 64 73.4
Nn2g11002 Nelumbo nucifera HOM05D002563 ORTHO05D008422 1.7e-19 99.8 64 71.9
QL01p026431 Quercus lobata HOM05D002563 ORTHO05D008422 2.2e-19 99.4 64 70.3
TWI31G1024 Tripterygium wilfordii HOM05D002563 ORTHO05D008422 2.2e-19 99.4 64 71.9
CANSAT54G2788 Cannabis sativa HOM05D002563 ORTHO05D008422 1.4e-18 96.7 64 67.2
Potri.009G077900 Populus trichocarpa HOM05D002563 ORTHO05D008422 1.4e-18 96.7 64 68.8
GSVIVG01024637001 Vitis vinifera HOM05D002563 ORTHO05D008422 1.4e-18 96.7 64 70.3
Cpa.g.sc2.360 Carica papaya HOM05D002563 ORTHO05D008422 1.9e-18 96.3 64 70.3
Actinidia23200 Actinidia chinensis HOM05D002563 ORTHO05D008422 2.5e-18 95.9 64 68.8
Medtr5g072900 Medicago truncatula HOM05D002563 ORTHO05D008422 2.5e-18 95.9 64 70.3
Sed0022573 Sechium edule HOM05D002563 ORTHO05D008422 5.5e-18 94.7 64 68.8
TPR.G29139 Trifolium pratense HOM05D002563 ORTHO05D008422 5.5e-18 94.7 64 70.3
Haze_24408 Corylus avellana HOM05D002563 ORTHO05D008422 7.1e-18 94.4 64 67.2
FvH4_3g39710 Fragaria vesca HOM05D002563 ORTHO05D008422 7.1e-18 94.4 64 67.2
FAN11G3709 Fragaria x ananassa HOM05D002563 ORTHO05D008422 7.1e-18 94.4 64 67.2
Gohir.A13G234800 Gossypium hirsutum HOM05D002563 ORTHO05D008422 7.1e-18 94.4 64 68.8
Gohir.D13G240500 Gossypium hirsutum HOM05D002563 ORTHO05D008422 7.1e-18 94.4 64 68.8
Gorai.013G271300 Gossypium raimondii HOM05D002563 ORTHO05D008422 7.1e-18 94.4 64 68.8
VMungo0647G2159 Vigna mungo HOM05D002563 ORTHO05D008422 9.3e-18 94.0 64 68.8
Ca_05647_v3 Cicer arietinum L. HOM05D002563 ORTHO05D008422 1.2e-17 93.6 64 68.8
Prupe.6G048800 Prunus persica HOM05D002563 ORTHO05D008422 1.2e-17 93.6 64 68.8
Psat2g053720 Pisum sativum HOM05D002563 ORTHO05D008422 1.6e-17 93.2 64 68.8
FAN16G2606 Fragaria x ananassa HOM05D002563 ORTHO05D008422 2.1e-17 92.8 64 65.6
RcHm_v2.0_Chr5g0071581 Rosa chinensis HOM05D002563 ORTHO05D008422 2.1e-17 92.8 64 67.2
Ciclev10028625m.g Citrus clementina HOM05D002563 ORTHO05D008422 2.7e-17 92.4 64 65.6
CSS0036604 Camellia sinensis var. sinensis HOM05D002563 ORTHO05D008422 3.5e-17 92.0 64 65.6
Phvul.008G256500 Phaseolus vulgaris HOM05D002563 ORTHO05D008422 3.5e-17 92.0 64 67.2
PGR102G1165 Punica granatum HOM05D002563 ORTHO05D008422 4.6e-17 91.7 64 65.6
Glyma.02G231100 Glycine max HOM05D002563 ORTHO05D008422 6.0e-17 91.3 64 68.8
Glyma.14G198700 Glycine max HOM05D002563 ORTHO05D008422 6.0e-17 91.3 64 68.8
CDE04G2686 Ceratophyllum demersum HOM05D002563 ORTHO05D008422 7.9e-17 90.9 64 65.6
FAN21G1037 Fragaria x ananassa HOM05D002563 ORTHO05D008422 7.9e-17 90.9 64 65.6
FAN21G1383 Fragaria x ananassa HOM05D002563 ORTHO05D008422 7.9e-17 90.9 64 65.6
FAN25G2495 Fragaria x ananassa HOM05D002563 ORTHO05D008422 7.9e-17 90.9 64 65.6
arahy.Tifrunner.gnm1.ann1.FHS7BK Arachis hypogaea HOM05D002563 ORTHO05D008422 1.0e-16 90.5 65 69.2
arahy.Tifrunner.gnm1.ann1.R8SLY5 Arachis hypogaea HOM05D002563 ORTHO05D008422 1.0e-16 90.5 65 67.7
CAN.G1095.22 Capsicum annuum HOM05D002563 ORTHO05D008422 1.0e-16 90.5 64 65.6
CiPaw.13G069700 Carya illinoinensis HOM05D002563 ORTHO05D008422 1.0e-16 90.5 64 64.1
HanXRQChr01g0012171 Helianthus annuus HOM05D002563 ORTHO05D008422 1.8e-16 89.7 64 65.6
LjContig00141g0005241 Lotus japonicus HOM05D002563 ORTHO05D008422 1.8e-16 89.7 64 65.6
Lalb_Chr04g0251991 Lupinus albus HOM05D002563 ORTHO05D008422 2.3e-16 89.4 64 65.6
Manes.18G127800 Manihot esculenta HOM05D002563 ORTHO05D008422 2.3e-16 89.4 64 64.1
Nitab4.5_0007880g0070 Nicotiana tabacum HOM05D002563 ORTHO05D008422 2.3e-16 89.4 64 64.1
MD11G1056900 Malus domestica HOM05D002563 ORTHO05D008422 3.0e-16 89.0 64 65.6
Peaxi162Scf00390g00724 Petunia axillaris HOM05D002563 ORTHO05D008422 3.0e-16 89.0 64 64.1
Solyc06g082280.3 Solanum lycopersicum HOM05D002563 ORTHO05D008422 3.0e-16 89.0 64 64.1
Duzib168G1120 Durio zibethinus HOM05D002563 ORTHO05D008422 3.9e-16 88.6 64 65.6
Sopen06g033660 Solanum pennellii HOM05D002563 ORTHO05D008422 3.9e-16 88.6 64 62.5
PGSC0003DMG400030377 Solanum tuberosum HOM05D002563 ORTHO05D008422 3.9e-16 88.6 64 64.1
vmacro02922 Vaccinium macrocarpon HOM05D002563 ORTHO05D008422 3.9e-16 88.6 64 64.1
Cc01_g14820 Coffea canephora HOM05D002563 ORTHO05D008422 5.1e-16 88.2 64 64.1
DCAR_018229 Daucus carota HOM05D002563 ORTHO05D008422 5.1e-16 88.2 64 60.9
MELO3C020515.2 Cucumis melo HOM05D002563 ORTHO05D008422 6.7e-16 87.8 65 66.2
ECA248G2589 Erigeron canadensis HOM05D002563 ORTHO05D008422 6.7e-16 87.8 64 64.1
Migut.D00849 Erythranthe guttata HOM05D002563 ORTHO05D008422 1.1e-15 87.0 64 60.9
CsaV3_1G036530 Cucumis sativus L. HOM05D002563 ORTHO05D008422 1.5e-15 86.7 65 64.6
Lj2A1092G52 Lonicera japonica HOM05D002563 ORTHO05D008422 1.5e-15 86.7 64 60.9
Carub.0001s0630 Capsella rubella HOM05D002563 ORTHO05D008422 1.9e-15 86.3 64 64.1
Thecc.09G357200 Theobroma cacao HOM05D002563 ORTHO05D008422 1.9e-15 86.3 63 66.7
MD03G1055900 Malus domestica HOM05D002563 ORTHO05D008422 2.5e-15 85.9 62 64.5
Aa31LG1G8060 Aethionema arabicum HOM05D002563 ORTHO05D008422 4.3e-15 85.1 64 60.9
THA.LOC104800768 Tarenaya hassleriana HOM05D002563 ORTHO05D008422 4.3e-15 85.1 64 62.5
EL10Ac7g15915 Beta vulgaris HOM05D002563 ORTHO05D008422 5.7e-15 84.7 64 59.4
AL1G17070 Arabidopsis lyrata HOM05D002563 ORTHO05D008422 9.6e-15 84.0 64 60.9
ClCG03G000390 Citrullus lanatus HOM05D002563 ORTHO05D008422 9.6e-15 84.0 62 67.7
Thhalv10009773m.g Eutrema salsugineum HOM05D002563 ORTHO05D008422 9.6e-15 84.0 64 60.9
Aqoxy1G01294 Aquilegia oxysepala HOM05D002563 ORTHO05D008422 1.6e-14 83.2 58 72.4
AT1G07010 Arabidopsis thaliana HOM05D002563 ORTHO05D008422 1.6e-14 83.2 64 60.9
BcaB02g06775 Brassica carinata HOM05D002563 ORTHO05D008422 1.6e-14 83.2 64 60.9
BcaC05g24667 Brassica carinata HOM05D002563 ORTHO05D008422 1.6e-14 83.2 64 60.9
A10p05560 Brassica napus HOM05D002563 ORTHO05D008422 1.6e-14 83.2 64 60.9
BolC5t29282H Brassica oleracea HOM05D002563 ORTHO05D008422 1.6e-14 83.2 64 60.9
BraA10t42817Z Brassica rapa HOM05D002563 ORTHO05D008422 1.6e-14 83.2 64 60.9
CARHR006700 Cardamine hirsuta HOM05D002563 ORTHO05D008422 1.6e-14 83.2 64 60.9
Oeu025051.1 Olea europaea HOM05D002563 ORTHO05D008422 3.7e-14 82.0 65 60.0
Hund29011 Selenicereus undatus HOM05D002563 ORTHO05D008422 3.7e-14 82.0 62 61.3
Hund29015 Selenicereus undatus HOM05D002563 ORTHO05D008422 3.7e-14 82.0 62 61.3
ATR0594G062 Amborella trichopoda HOM05D002563 ORTHO05D008422 6.3e-14 81.3 64 57.8
Sp1g05730 Schrenkiella parvula HOM05D002563 ORTHO05D008422 6.3e-14 81.3 64 59.4
AUR62001877 Chenopodium quinoa HOM05D002563 ORTHO05D008422 1.1e-13 80.5 64 57.8
MSTRG.21237 Avicennia marina HOM05D002563 ORTHO05D008422 1.7e-11 73.2 56 58.9
Zm00001eb048700 Zea mays HOM05D002563 ORTHO05D008422 2.9e-11 72.4 64 50.0
Cfa011772 Carpinus fangiana HOM05D004740 ORTHO05D005991 2.5e-10 69.3 39 76.9
Rhsim13G0064600 Rhododendron simsii HOM05D002563 ORTHO05D008422 7.2e-10 67.8 111 36.9
Atru.BG.123.p Acer truncatum HOM05D002563 ORTHO05D008422 1.6e-09 66.6 39 71.8
AUR62009674 Chenopodium quinoa HOM05D002563 ORTHO05D008422 1.6e-09 66.6 37 75.7
unitig_0.g2143 Utricularia gibba HOM05D002563 ORTHO05D008422 6.1e-09 64.7 37 73.0
AagrBONN_evm.TU.Sc2ySwM_228.874 Anthoceros agrestis HOM05D002563 ORTHO05D008422 1.0e-08 63.9 50 52.0
COL.COLO4_11148 Corchorus olitorius HOM05D002563 ORTHO05D008422 1.3e-08 63.5 37 73.0
Pp3c16_8100 Physcomitrium patens HOM05D002563 ORTHO05D008422 1.8e-08 63.2 47 59.6
Pp3c16_8111 Physcomitrium patens HOM05D002563 ORTHO05D008422 1.8e-08 63.2 47 59.6
Pp3c25_5070 Physcomitrium patens HOM05D002563 ORTHO05D008422 3.9e-08 62.0 47 59.6
SGA_v2.0_scaffold20G09295 Striga asiatica HOM05D002563 ORTHO05D008422 3.9e-08 62.0 37 67.6
Mapoly0009s0052 Marchantia polymorpha HOM05D002563 ORTHO05D008422 4.3e-07 58.5 47 51.1
SMO304G0050 Selaginella moellendorffii HOM05D002563 ORTHO05D008422 4.8e-06 55.1 47 46.8


User provided reference genes

Program Settings