Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 2.2e-57 225.3 109 100.0
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 4.8e-44 181.0 122 76.2
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 1.7e-36 156.0 122 62.3
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 1.7e-36 156.0 122 64.8
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 2.2e-36 155.6 122 65.6
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 2.2e-36 155.6 122 63.9
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 3.7e-36 154.8 122 64.8
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 3.7e-36 154.8 122 63.9
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 3.7e-36 154.8 125 63.2
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 6.3e-36 154.1 122 63.1
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 6.3e-36 154.1 122 63.1
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 6.3e-36 154.1 122 61.5
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 8.2e-36 153.7 122 63.1
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 1.4e-35 152.9 122 62.3
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 1.4e-35 152.9 125 61.6
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 1.4e-35 152.9 122 60.7
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 1.4e-35 152.9 122 60.7
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 1.8e-35 152.5 125 60.0
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 1.8e-35 152.5 125 60.0
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 3.1e-35 151.8 122 60.7
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 3.1e-35 151.8 122 61.5
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 4.1e-35 151.4 122 61.5
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 5.3e-35 151.0 122 60.7
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 9.1e-35 150.2 122 59.8
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 9.1e-35 150.2 125 60.0
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 1.2e-34 149.8 125 60.0
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 1.6e-34 149.4 122 59.8
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 1.6e-34 149.4 125 60.8
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 2.0e-34 149.1 122 61.5
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 2.7e-34 148.7 122 60.7
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 2.7e-34 148.7 122 63.1
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 3.5e-34 148.3 122 63.1
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 3.5e-34 148.3 124 61.3
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 3.5e-34 148.3 124 61.3
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 3.5e-34 148.3 125 59.2
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 3.5e-34 148.3 122 63.1
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 4.5e-34 147.9 125 58.4
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 5.9e-34 147.5 125 59.2
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 7.7e-34 147.1 122 60.7
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 7.7e-34 147.1 122 59.8
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 1.0e-33 146.7 122 62.3
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 1.0e-33 146.7 125 58.4
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 1.0e-33 146.7 122 59.8
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 1.3e-33 146.4 122 61.5
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 1.3e-33 146.4 122 61.5
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 1.7e-33 146.0 122 61.5
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 1.7e-33 146.0 122 60.7
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 2.9e-33 145.2 123 61.0
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 6.5e-33 144.1 122 60.7
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 8.5e-33 143.7 122 59.8
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 1.1e-32 143.3 123 61.0
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 1.1e-32 143.3 125 57.6
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 1.1e-32 143.3 125 59.2
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 1.5e-32 142.9 125 57.6
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 2.5e-32 142.1 122 58.2
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 2.5e-32 142.1 122 58.2
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 3.2e-32 141.7 122 59.0
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 3.2e-32 141.7 122 58.2
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 4.2e-32 141.4 122 58.2
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 4.2e-32 141.4 121 59.5
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 5.5e-32 141.0 122 57.4
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 9.4e-32 140.2 122 57.4
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 9.4e-32 140.2 121 58.7
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 9.4e-32 140.2 121 58.7
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 9.4e-32 140.2 121 58.7
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 1.2e-31 139.8 122 55.7
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.6e-31 139.4 122 56.6
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 2.1e-31 139.0 122 59.8
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 3.6e-31 138.3 122 56.6
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 4.7e-31 137.9 122 57.4
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 6.1e-31 137.5 122 59.0
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 8.0e-31 137.1 122 57.4
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 8.0e-31 137.1 122 57.4
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 8.0e-31 137.1 122 57.4
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.0e-30 136.7 123 57.7
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 1.0e-30 136.7 122 54.9
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 1.4e-30 136.3 122 56.6
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.4e-30 136.3 122 57.4
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 1.4e-30 136.3 125 54.4
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 1.8e-30 136.0 122 59.0
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 2.3e-30 135.6 122 54.1
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 4.0e-30 134.8 122 55.7
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 4.0e-30 134.8 122 57.4
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 5.2e-30 134.4 122 56.6
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 5.2e-30 134.4 122 58.2
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 6.8e-30 134.0 122 55.7
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 8.8e-30 133.7 122 54.1
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 8.8e-30 133.7 122 54.9
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 2.6e-29 132.1 122 53.3
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 4.4e-29 131.3 122 53.3
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 4.4e-29 131.3 122 54.9
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 9.8e-29 130.2 122 53.3
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 2.2e-28 129.0 122 53.3
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 2.8e-28 128.6 125 54.4
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 2.8e-28 128.6 125 54.4
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 3.7e-28 128.3 122 52.5
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 6.3e-28 127.5 122 50.8
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 1.4e-27 126.3 136 50.7
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 3.5e-26 121.7 137 48.2
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 7.7e-26 120.6 138 47.8
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 2.3e-25 119.0 63 82.5
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 1.1e-24 116.7 122 47.5
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 1.9e-24 115.9 63 79.4
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 9.5e-24 113.6 63 77.8
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 6.1e-23 110.9 63 74.6
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 2.3e-22 109.0 99 54.5
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 4.0e-22 108.2 122 45.1
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 6.8e-22 107.5 63 69.8
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 4.4e-21 104.8 116 48.3
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 1.3e-20 103.2 120 42.5
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 2.4e-19 99.0 124 41.1
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 2.4e-19 99.0 53 81.1
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 5.4e-19 97.8 120 40.8
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 5.4e-19 97.8 60 75.0
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.0e-17 93.6 55 74.5
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 5.6e-16 87.8 103 50.5
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 1.8e-14 82.8 54 63.0
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 5.8e-13 77.8 85 45.9
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 9.8e-13 77.0 71 46.5
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 1.6e-07 59.7 56 53.6


User provided reference genes

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