Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4233 Papaver somniferum HOM05D002468 ORTHO05D005371 5.9e-242 840.5 440 100.0
PSO478G3355 Papaver somniferum HOM05D002468 ORTHO05D005371 5.7e-237 823.9 441 98.0
Aqoxy5G03074 Aquilegia oxysepala HOM05D002468 ORTHO05D005371 6.6e-201 704.1 441 83.4
TAR629G1443 Trochodendron aralioides HOM05D002468 ORTHO05D005371 1.1e-200 703.4 438 83.6
QL03p049039 Quercus lobata HOM05D002468 ORTHO05D005371 1.2e-197 693.3 438 81.7
Cfa009455 Carpinus fangiana HOM05D002468 ORTHO05D005371 1.5e-197 693.0 438 82.2
TAR371G0123 Trochodendron aralioides HOM05D002468 ORTHO05D005371 1.7e-196 689.5 415 85.1
Atru.chr12.1428 Acer truncatum HOM05D002468 ORTHO05D005371 1.9e-195 686.0 440 81.6
CiPaw.06G109900 Carya illinoinensis HOM05D002468 ORTHO05D005371 3.2e-195 685.3 438 81.7
Actinidia30583 Actinidia chinensis HOM05D002468 ORTHO05D005371 7.1e-195 684.1 439 81.8
CiPaw.05G100700 Carya illinoinensis HOM05D002468 ORTHO05D005371 7.1e-195 684.1 438 81.3
GSVIVG01001098001 Vitis vinifera HOM05D002468 ORTHO05D005371 1.7e-193 679.5 439 80.6
Ciclev10004979m.g Citrus clementina HOM05D002468 ORTHO05D005371 3.9e-193 678.3 438 80.8
Prupe.1G214200 Prunus persica HOM05D002468 ORTHO05D005371 3.9e-193 678.3 439 80.6
Sabra03G0117600 Salix brachista HOM05D002468 ORTHO05D005371 6.6e-193 677.6 439 80.9
Rhsim12G0017100 Rhododendron simsii HOM05D002468 ORTHO05D005371 2.5e-192 675.6 443 81.3
CANSAT01G0579 Cannabis sativa HOM05D002468 ORTHO05D005371 4.3e-192 674.9 438 81.5
CSS0032961 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 7.3e-192 674.1 438 80.8
CsaV3_4G002210 Cucumis sativus L. HOM05D002468 ORTHO05D005371 1.2e-191 673.3 439 80.2
MD16G1141700 Malus domestica HOM05D002468 ORTHO05D005371 1.2e-191 673.3 439 80.6
TWI18G0725 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 1.2e-191 673.3 444 80.9
arahy.Tifrunner.gnm1.ann1.PCZ0HW Arachis hypogaea HOM05D002468 ORTHO05D005371 3.6e-191 671.8 438 79.2
arahy.Tifrunner.gnm1.ann1.S6Z2J3 Arachis hypogaea HOM05D002468 ORTHO05D005371 3.6e-191 671.8 438 79.2
CSS0030444 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 3.6e-191 671.8 438 80.6
Dinv17539 Davidia involucrata HOM05D002468 ORTHO05D005371 3.6e-191 671.8 438 81.1
ClCG07G011940 Citrullus lanatus HOM05D002468 ORTHO05D005371 4.7e-191 671.4 439 81.3
Cpa.g.sc38.67 Carica papaya HOM05D002468 ORTHO05D005371 6.2e-191 671.0 441 79.8
Dinv03336 Davidia involucrata HOM05D002468 ORTHO05D005371 6.2e-191 671.0 438 80.6
TWI36G1422 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 1.1e-190 670.2 447 79.9
MELO3C017817.2 Cucumis melo HOM05D002468 ORTHO05D005371 4.0e-190 668.3 438 79.9
Potri.001G068200 Populus trichocarpa HOM05D002468 ORTHO05D005371 6.9e-190 667.5 439 79.7
RcHm_v2.0_Chr4g0428801 Rosa chinensis HOM05D002468 ORTHO05D005371 1.2e-189 666.8 440 79.8
Lsat_1_v5_gn_3_32661 Lactuca sativa HOM05D002468 ORTHO05D005371 1.5e-189 666.4 438 81.1
Sed0000476 Sechium edule HOM05D002468 ORTHO05D005371 1.5e-189 666.4 438 79.7
Cc11_g14960 Coffea canephora HOM05D002468 ORTHO05D005371 2.0e-189 666.0 445 80.4
THA.LOC104807252 Tarenaya hassleriana HOM05D002468 ORTHO05D005371 2.0e-189 666.0 441 78.9
Thhalv10013572m.g Eutrema salsugineum HOM05D002468 ORTHO05D005371 2.6e-189 665.6 439 80.0
FvH4_4g22560 Fragaria vesca HOM05D002468 ORTHO05D005371 3.4e-189 665.2 441 80.3
FAN07G2580 Fragaria x ananassa HOM05D002468 ORTHO05D005371 5.8e-189 664.5 441 79.8
PGR119G1329 Punica granatum HOM05D002468 ORTHO05D005371 7.6e-189 664.1 441 78.9
HanXRQChr17g0540381 Helianthus annuus HOM05D002468 ORTHO05D005371 9.9e-189 663.7 438 79.5
MD13G1131400 Malus domestica HOM05D002468 ORTHO05D005371 1.3e-188 663.3 440 80.0
Medtr7g006560 Medicago truncatula HOM05D002468 ORTHO05D005371 1.3e-188 663.3 439 78.1
TPR.G9718 Trifolium pratense HOM05D002468 ORTHO05D005371 1.3e-188 663.3 443 78.1
FAN12G2192 Fragaria x ananassa HOM05D002468 ORTHO05D005371 1.7e-188 662.9 439 80.6
Ca_04094_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 2.9e-188 662.1 435 78.9
Eucgr.G01978 Eucalyptus grandis HOM05D002468 ORTHO05D005371 4.9e-188 661.4 440 79.3
Glyma.08G362900 Glycine max HOM05D002468 ORTHO05D005371 4.9e-188 661.4 442 79.2
EL10Ac6g13612 Beta vulgaris HOM05D002468 ORTHO05D005371 8.4e-188 660.6 441 78.2
ECA246G0169 Erigeron canadensis HOM05D002468 ORTHO05D005371 8.4e-188 660.6 441 80.0
C09p63670 Brassica napus HOM05D002468 ORTHO05D005371 1.4e-187 659.8 438 79.7
BolC9t59208H Brassica oleracea HOM05D002468 ORTHO05D005371 1.4e-187 659.8 438 79.7
Lj1g0025256 Lotus japonicus HOM05D002468 ORTHO05D005371 1.4e-187 659.8 439 78.8
Solyc11g033288.1 Solanum lycopersicum HOM05D002468 ORTHO05D005371 1.4e-187 659.8 438 79.9
VMungo1383G1406 Vigna mungo HOM05D002468 ORTHO05D005371 1.4e-187 659.8 446 77.8
BraA10t44546Z Brassica rapa HOM05D002468 ORTHO05D005371 1.9e-187 659.4 438 79.7
CAN.G624.1 Capsicum annuum HOM05D002468 ORTHO05D005371 1.9e-187 659.4 440 78.2
Thecc.02G191400 Theobroma cacao HOM05D002468 ORTHO05D005371 1.9e-187 659.4 440 79.8
Haze_12509 Corylus avellana HOM05D002468 ORTHO05D005371 2.4e-187 659.1 413 82.1
A10p24820 Brassica napus HOM05D002468 ORTHO05D005371 3.2e-187 658.7 440 80.2
Gohir.D04G140900 Gossypium hirsutum HOM05D002468 ORTHO05D005371 3.2e-187 658.7 440 79.3
Manes.08G100600 Manihot esculenta HOM05D002468 ORTHO05D005371 3.2e-187 658.7 440 78.4
Sopen11g017140 Solanum pennellii HOM05D002468 ORTHO05D005371 3.2e-187 658.7 438 79.9
Manes.09G188600 Manihot esculenta HOM05D002468 ORTHO05D005371 4.2e-187 658.3 443 78.1
Carub.0006s1158 Capsella rubella HOM05D002468 ORTHO05D005371 5.4e-187 657.9 441 79.1
AT5G13420 Arabidopsis thaliana HOM05D002468 ORTHO05D005371 7.1e-187 657.5 437 78.7
FAN17G0051 Fragaria x ananassa HOM05D002468 ORTHO05D005371 7.1e-187 657.5 441 79.4
SalBow2G0960 Salvia bowleyana HOM05D002468 ORTHO05D005371 7.1e-187 657.5 440 78.9
Sc11g0000080 Simmondsia chinensis HOM05D002468 ORTHO05D005371 7.1e-187 657.5 441 78.7
CARHR200010 Cardamine hirsuta HOM05D002468 ORTHO05D005371 9.3e-187 657.1 435 79.3
Glyma.18G299100 Glycine max HOM05D002468 ORTHO05D005371 1.2e-186 656.8 442 78.1
MBI07_g35982_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 1.2e-186 656.8 438 78.8
vmacro01017 Vaccinium macrocarpon HOM05D002468 ORTHO05D005371 1.2e-186 656.8 439 79.3
AL6G24040 Arabidopsis lyrata HOM05D002468 ORTHO05D005371 3.5e-186 655.2 437 78.9
Peaxi162Scf00842g00319 Petunia axillaris HOM05D002468 ORTHO05D005371 3.5e-186 655.2 439 77.9
PGSC0003DMG402028027 Solanum tuberosum HOM05D002468 ORTHO05D005371 3.5e-186 655.2 438 79.5
AUR62005716 Chenopodium quinoa HOM05D002468 ORTHO05D005371 4.6e-186 654.8 399 83.2
Gorai.012G125900 Gossypium raimondii HOM05D002468 ORTHO05D005371 6.0e-186 654.4 440 78.4
Psat3g207000 Pisum sativum HOM05D002468 ORTHO05D005371 6.0e-186 654.4 440 78.2
Sed0003563 Sechium edule HOM05D002468 ORTHO05D005371 6.0e-186 654.4 438 79.5
Gohir.A04G101700 Gossypium hirsutum HOM05D002468 ORTHO05D005371 7.8e-186 654.1 440 78.4
Lalb_Chr04g0257301 Lupinus albus HOM05D002468 ORTHO05D005371 7.8e-186 654.1 440 78.2
MSTRG.449 Avicennia marina HOM05D002468 ORTHO05D005371 2.3e-185 652.5 442 78.3
Duzib132G1053 Durio zibethinus HOM05D002468 ORTHO05D005371 3.0e-185 652.1 440 78.4
Sp6g30600 Schrenkiella parvula HOM05D002468 ORTHO05D005371 3.0e-185 652.1 407 83.0
Phvul.008G003600 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 3.9e-185 651.7 446 77.4
Oeu010257.1 Olea europaea HOM05D002468 ORTHO05D005371 5.1e-185 651.4 439 77.9
AUR62028839 Chenopodium quinoa HOM05D002468 ORTHO05D005371 6.6e-185 651.0 399 82.5
DCAR_024636 Daucus carota HOM05D002468 ORTHO05D005371 1.9e-184 649.4 437 79.2
Ah.03g135540 Amaranthus hybridus HOM05D002468 ORTHO05D005371 7.3e-184 647.5 443 76.3
Hund14581 Selenicereus undatus HOM05D002468 ORTHO05D005371 7.3e-184 647.5 441 78.2
MSTRG.8058 Avicennia marina HOM05D002468 ORTHO05D005371 2.1e-183 646.0 442 77.4
BcaC04g19118 Brassica carinata HOM05D002468 ORTHO05D005371 2.1e-183 646.0 440 78.9
C02p06130 Brassica napus HOM05D002468 ORTHO05D005371 4.8e-183 644.8 441 77.8
BolC2t06554H Brassica oleracea HOM05D002468 ORTHO05D005371 1.1e-182 643.7 437 78.3
A02p01910 Brassica napus HOM05D002468 ORTHO05D005371 1.4e-182 643.3 407 82.1
BraA02t05164Z Brassica rapa HOM05D002468 ORTHO05D005371 1.4e-182 643.3 407 82.1
CDE05G2158 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 6.9e-182 641.0 426 77.2
BraA03t09933Z Brassica rapa HOM05D002468 ORTHO05D005371 1.2e-181 640.2 442 77.6
Duzib052G0101 Durio zibethinus HOM05D002468 ORTHO05D005371 1.2e-181 640.2 440 77.3
CDE05G3080 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 2.6e-181 639.0 397 80.6
A03p05960 Brassica napus HOM05D002468 ORTHO05D005371 3.4e-181 638.6 438 78.1
C03p07000 Brassica napus HOM05D002468 ORTHO05D005371 2.9e-180 635.6 437 77.1
BolC3t13199H Brassica oleracea HOM05D002468 ORTHO05D005371 2.9e-180 635.6 437 77.1
HanXRQChr06g0175161 Helianthus annuus HOM05D002468 ORTHO05D005371 6.4e-180 634.4 437 76.2
MBI07_g48060_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 3.5e-178 628.6 480 71.5
Migut.K01049 Erythranthe guttata HOM05D002468 ORTHO05D005371 7.9e-178 627.5 441 76.2
HPP92_009801 Vanilla planifolia HOM05D002468 ORTHO05D005371 1.0e-177 627.1 423 76.1
unitig_8.g2893 Utricularia gibba HOM05D002468 ORTHO05D005371 3.0e-177 625.5 377 83.8
Os01g0926300 Oryza sativa ssp. japonica HOM05D002468 ORTHO05D005371 5.1e-177 624.8 437 75.5
SGA_v2.0_scaffold258G45768 Striga asiatica HOM05D002468 ORTHO05D005371 5.1e-177 624.8 446 74.9
Zm00001eb363880 Zea mays HOM05D002468 ORTHO05D005371 1.1e-176 623.6 380 82.1
Zm00001eb142730 Zea mays HOM05D002468 ORTHO05D005371 4.3e-176 621.7 388 80.7
ATR0582G307 Amborella trichopoda HOM05D002468 ORTHO05D005371 5.6e-176 621.3 377 83.3
Aa31LG3G14290 Aethionema arabicum HOM05D002468 ORTHO05D005371 1.8e-174 616.3 485 68.2
HanXRQChr06g0175171 Helianthus annuus HOM05D002468 ORTHO05D005371 3.1e-174 615.5 381 80.8
CSS0032033 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 6.4e-172 607.8 389 80.2
Actinidia22113 Actinidia chinensis HOM05D002468 ORTHO05D005371 4.6e-170 601.7 380 83.9
Nitab4.5_0004349g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 5.6e-168 594.7 440 73.4
BcaB01g05361 Brassica carinata HOM05D002468 ORTHO05D005371 3.1e-166 589.0 437 73.5
Nitab4.5_0002569g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 1.7e-156 556.6 442 70.4
Potri.003G161900 Populus trichocarpa HOM05D002468 ORTHO05D005371 6.5e-156 554.7 368 80.4
BcaNung01156 Brassica carinata HOM05D002468 ORTHO05D005371 4.6e-154 548.5 389 76.9
AagrBONN_evm.TU.Sc2ySwM_228.2334 Anthoceros agrestis HOM05D002468 ORTHO05D005371 3.3e-152 542.3 408 68.9
Lj4g0027400 Lotus japonicus HOM05D002468 ORTHO05D005371 5.3e-150 535.0 374 70.6
Lalb_Chr10g0091121 Lupinus albus HOM05D002468 ORTHO05D005371 5.3e-150 535.0 360 80.0
Lalb_Chr13g0296941 Lupinus albus HOM05D002468 ORTHO05D005371 1.1e-147 527.3 371 68.5
Lj6C840T10 Lonicera japonica HOM05D002468 ORTHO05D005371 2.6e-144 516.2 304 86.5
Glyma.05G199800 Glycine max HOM05D002468 ORTHO05D005371 9.7e-144 514.2 365 67.9
SMO367G1271 Selaginella moellendorffii HOM05D002468 ORTHO05D005371 2.8e-143 512.7 361 72.0
Medtr8g096130 Medicago truncatula HOM05D002468 ORTHO05D005371 1.2e-141 507.3 375 67.2
Phvul.002G281000 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 1.5e-141 506.9 374 65.8
Mapoly0092s0071 Marchantia polymorpha HOM05D002468 ORTHO05D005371 2.2e-140 503.1 434 61.8
Mapoly0092s0072 Marchantia polymorpha HOM05D002468 ORTHO05D005371 2.9e-140 502.7 383 66.6
Mapoly0092s0073 Marchantia polymorpha HOM05D002468 ORTHO05D005371 3.8e-140 502.3 383 66.6
VMungo0251G2964 Vigna mungo HOM05D002468 ORTHO05D001247 8.5e-140 501.1 378 64.0
Ca_16823_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 3.2e-139 499.2 369 65.6
TPR.G12900 Trifolium pratense HOM05D002468 ORTHO05D005371 9.4e-139 497.7 424 61.1
Pp3c26_4790 Physcomitrium patens HOM05D002468 ORTHO05D005371 8.8e-137 491.1 361 69.0
ClCG06G013000 Citrullus lanatus HOM05D002468 ORTHO05D005371 4.1e-134 482.3 371 63.1
Cpa.g.sc2215.1 Carica papaya HOM05D002468 ORTHO05D005371 2.7e-130 469.5 359 63.8
MELO3C017506.2 Cucumis melo HOM05D002468 ORTHO05D005371 8.0e-130 468.0 371 62.3
SHI04110 Sapria himalayana HOM05D002468 ORTHO05D005371 1.8e-126 456.8 318 74.2
CBR_g51451 Chara braunii HOM05D002468 ORTHO05D005371 9.8e-112 407.9 360 60.6
arahy.Tifrunner.gnm1.ann1.93S04R Arachis hypogaea HOM05D002468 ORTHO05D005371 1.9e-94 350.5 366 52.2
Eucgr.H00650 Eucalyptus grandis HOM05D002468 ORTHO05D005371 5.6e-91 339.0 302 59.6
Lj2g0022028 Lotus japonicus HOM05D002468 ORTHO05D005371 5.6e-83 312.4 214 73.4
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 9.9e-72 275.0 186 79.0
Mapoly0189s0003 Marchantia polymorpha HOM05D002468 ORTHO05D005371 6.6e-68 262.3 328 43.9
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 4.6e-61 239.6 139 88.5
arahy.Tifrunner.gnm1.ann1.1XR5VC Arachis hypogaea HOM05D002468 ORTHO05D005371 1.1e-57 228.4 198 59.1
Glyma.15G205533 Glycine max HOM05D002468 ORTHO05D005371 4.9e-55 219.5 153 71.2
HanXRQChr10g0304361 Helianthus annuus HOM05D002468 ORTHO05D005371 4.9e-55 219.5 123 83.7
CsaV3_1G031170 Cucumis sativus L. HOM05D002468 ORTHO05D005371 8.5e-39 165.6 162 54.9
BcaB01g05316 Brassica carinata HOM05D000877 ORTHO05D012137 1.0e-36 158.7 111 77.5
Glyma.08G007300 Glycine max HOM05D002468 ORTHO05D005371 8.8e-36 155.6 119 66.4
BolC3t13237H Brassica oleracea HOM05D000877 ORTHO05D012137 1.1e-33 148.7 81 91.4
SGA_v2.0_scaffold4G02418 Striga asiatica HOM05D002468 ORTHO05D051394 3.9e-28 130.2 100 60.0
Lalb_Chr10g0091111 Lupinus albus HOM05D002468 ORTHO05D005371 7.4e-27 125.9 79 79.7
CsaV3_1G031160 Cucumis sativus L. HOM05D002468 ORTHO05D005371 1.3e-26 125.2 80 71.2
SGA_v2.0_scaffold528G52739 Striga asiatica HOM05D002468 ORTHO05D051394 9.7e-19 99.0 62 77.4
SEGI_31132 Sequoiadendron giganteum HOM05D002468 ORTHO05D005371 2.8e-18 97.4 182 38.5
Pp3c3_15390 Physcomitrium patens HOM05D002468 ORTHO05D005371 4.2e-14 83.6 94 51.1
vmacro08874 Vaccinium macrocarpon HOM05D002468 ORTHO05D013153 2.5e-06 57.8 137 38.0


User provided reference genes

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