Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4122 Papaver somniferum HOM05D005008 ORTHO05D006092 1.5e-92 342.8 172 100.0
PSO017G3706 Papaver somniferum HOM05D005008 ORTHO05D006092 5.1e-64 248.1 124 99.2
PSO478G0762 Papaver somniferum HOM05D005008 ORTHO05D006092 5.8e-60 234.6 124 93.5
PSO325G0018 Papaver somniferum HOM05D005008 ORTHO05D006092 8.1e-54 214.2 122 86.1
PSO339G0217 Papaver somniferum HOM05D005008 ORTHO05D006092 5.8e-52 208.0 110 91.8
PSO144G0132 Papaver somniferum HOM05D005008 ORTHO05D006092 1.4e-50 203.4 117 84.6
PSO541G3575 Papaver somniferum HOM05D005008 ORTHO05D006092 4.6e-49 198.4 144 72.9
Aqoxy7G02777 Aquilegia oxysepala HOM05D005008 ORTHO05D006092 4.9e-35 151.8 120 59.2
Atru.chr3.3067 Acer truncatum HOM05D005008 ORTHO05D006092 7.1e-34 147.9 122 55.7
DCAR_021985 Daucus carota HOM05D005008 ORTHO05D006092 1.0e-32 144.1 142 48.6
Hma1.2p1_0101F.1_g049710 Hydrangea macrophylla HOM05D005008 ORTHO05D006092 1.5e-31 140.2 121 52.1
AUR62001577 Chenopodium quinoa HOM05D005008 ORTHO05D006092 1.6e-30 136.7 122 54.1
EL10Ac7g16268 Beta vulgaris HOM05D005008 ORTHO05D006092 6.3e-30 134.8 124 51.6
TAR628G1298 Trochodendron aralioides HOM05D005008 ORTHO05D006092 6.3e-30 134.8 122 50.0
Rhsim13G0198500 Rhododendron simsii HOM05D005008 ORTHO05D006092 8.2e-30 134.4 121 52.1
FAN08G1342 Fragaria x ananassa HOM05D005008 ORTHO05D006092 1.4e-29 133.7 124 53.2
FAN13G1722 Fragaria x ananassa HOM05D005008 ORTHO05D006092 1.4e-29 133.7 124 53.2
FAN18G0191 Fragaria x ananassa HOM05D005008 ORTHO05D006092 1.4e-29 133.7 124 53.2
Sc21g0006720 Simmondsia chinensis HOM05D005008 ORTHO05D006092 1.4e-29 133.7 122 52.5
CAN.G1463.18 Capsicum annuum HOM05D005008 ORTHO05D006092 1.8e-29 133.3 120 50.0
Nitab4.5_0015902g0010 Nicotiana tabacum HOM05D005008 ORTHO05D006092 1.8e-29 133.3 119 51.3
Thecc.09G268300 Theobroma cacao HOM05D005008 ORTHO05D006092 2.4e-29 132.9 122 53.3
Peaxi162Scf00717g00217 Petunia axillaris HOM05D005008 ORTHO05D006092 3.1e-29 132.5 122 50.0
THA.LOC104808952 Tarenaya hassleriana HOM05D005008 ORTHO05D006092 3.1e-29 132.5 118 52.5
ATR1136G073 Amborella trichopoda HOM05D005008 ORTHO05D006092 5.3e-29 131.7 122 50.0
Nitab4.5_0003644g0030 Nicotiana tabacum HOM05D005008 ORTHO05D006092 6.9e-29 131.3 122 50.0
PGSC0003DMG400002990 Solanum tuberosum HOM05D005008 ORTHO05D006092 6.9e-29 131.3 122 50.0
Dinv18863 Davidia involucrata HOM05D005008 ORTHO05D006092 9.0e-29 131.0 120 50.8
PGSC0003DMG400005906 Solanum tuberosum HOM05D005008 ORTHO05D006092 9.0e-29 131.0 120 48.3
FAN04G2231 Fragaria x ananassa HOM05D005008 ORTHO05D006092 1.2e-28 130.6 120 52.5
MBI17_g21976_MAGBIO Magnolia biondii HOM05D000527 ORTHO05D000559 1.2e-28 130.6 114 52.6
Peaxi162Scf00098g00148 Petunia axillaris HOM05D005008 ORTHO05D006092 1.5e-28 130.2 119 48.7
CDE04G3167 Ceratophyllum demersum HOM05D005008 ORTHO05D006092 2.0e-28 129.8 119 50.4
CDE05G0523 Ceratophyllum demersum HOM05D005008 ORTHO05D006092 2.0e-28 129.8 119 50.4
CSS0002518 Camellia sinensis var. sinensis HOM05D005008 ORTHO05D006092 2.6e-28 129.4 121 49.6
Solyc06g073900.3 Solanum lycopersicum HOM05D005008 ORTHO05D006092 2.6e-28 129.4 120 47.5
Sopen06g030300 Solanum pennellii HOM05D005008 ORTHO05D006092 2.6e-28 129.4 120 47.5
MBI17_g21974_MAGBIO Magnolia biondii HOM05D005008 ORTHO05D006092 3.4e-28 129.0 118 50.0
Nitab4.5_0002426g0070 Nicotiana tabacum HOM05D005008 ORTHO05D006092 3.4e-28 129.0 122 50.0
CsaV3_1G043620 Cucumis sativus L. HOM05D005008 ORTHO05D006092 4.5e-28 128.6 121 50.4
PGR083G2197 Punica granatum HOM05D005008 ORTHO05D006092 4.5e-28 128.6 120 50.8
Nitab4.5_0005569g0020 Nicotiana tabacum HOM05D005008 ORTHO05D006092 5.9e-28 128.3 122 49.2
MELO3C015091.2 Cucumis melo HOM05D005008 ORTHO05D006092 7.6e-28 127.9 121 50.4
Lj2E351T1 Lonicera japonica HOM05D005008 ORTHO05D006092 7.6e-28 127.9 117 49.6
Hund18808 Selenicereus undatus HOM05D005008 ORTHO05D006092 1.0e-27 127.5 118 49.2
Duzib170G0524 Durio zibethinus HOM05D005008 ORTHO05D006092 1.3e-27 127.1 122 51.6
RcHm_v2.0_Chr7g0230441 Rosa chinensis HOM05D005008 ORTHO05D006092 1.3e-27 127.1 122 50.8
SGA_v2.0_scaffold114G31950 Striga asiatica HOM05D005008 ORTHO05D006092 1.7e-27 126.7 116 50.9
Dinv21730 Davidia involucrata HOM05D005008 ORTHO05D006092 2.2e-27 126.3 117 49.6
Eucgr.J00592 Eucalyptus grandis HOM05D005008 ORTHO05D006092 2.2e-27 126.3 117 52.1
RcHm_v2.0_Chr5g0049161 Rosa chinensis HOM05D005008 ORTHO05D006092 2.2e-27 126.3 122 50.8
Sc12g0000410 Simmondsia chinensis HOM05D005008 ORTHO05D006092 2.2e-27 126.3 119 51.3
CiPaw.13G126400 Carya illinoinensis HOM05D005008 ORTHO05D006092 3.8e-27 125.6 122 50.0
Manes.11G103800 Manihot esculenta HOM05D005008 ORTHO05D006092 3.8e-27 125.6 122 50.0
Solyc11g071790.2 Solanum lycopersicum HOM05D005008 ORTHO05D006092 3.8e-27 125.6 122 48.4
Sopen11g029460 Solanum pennellii HOM05D005008 ORTHO05D006092 3.8e-27 125.6 118 48.3
Ca_18750_v3 Cicer arietinum L. HOM05D005008 ORTHO05D006092 6.5e-27 124.8 119 51.3
Duzib168G2291 Durio zibethinus HOM05D005008 ORTHO05D006092 6.5e-27 124.8 122 50.0
MD11G1175100 Malus domestica HOM05D005008 ORTHO05D006092 6.5e-27 124.8 122 49.2
Migut.D02371 Erythranthe guttata HOM05D005008 ORTHO05D006092 8.5e-27 124.4 117 50.4
Migut.D02374 Erythranthe guttata HOM05D005008 ORTHO05D006092 8.5e-27 124.4 117 50.4
Sed0018780 Sechium edule HOM05D005008 ORTHO05D006092 8.5e-27 124.4 121 49.6
unitig_746.g26601 Utricularia gibba HOM05D005008 ORTHO05D006092 8.5e-27 124.4 117 50.4
BcaC07g38394 Brassica carinata HOM05D005008 ORTHO05D006092 1.4e-26 123.6 124 49.2
C08p11520 Brassica napus HOM05D005008 ORTHO05D006092 1.4e-26 123.6 124 49.2
BolC8t48832H Brassica oleracea HOM05D005008 ORTHO05D006092 1.4e-26 123.6 124 49.2
BraA08t35421Z Brassica rapa HOM05D005008 ORTHO05D006092 1.4e-26 123.6 124 49.2
Ciclev10029485m.g Citrus clementina HOM05D005008 ORTHO05D006092 1.4e-26 123.6 122 49.2
PSO447G0120 Papaver somniferum HOM05D005008 ORTHO05D006092 1.4e-26 123.6 63 92.1
Sp1g07130 Schrenkiella parvula HOM05D005008 ORTHO05D006092 1.4e-26 123.6 147 44.9
unitig_899.g15386 Utricularia gibba HOM05D005008 ORTHO05D006092 1.4e-26 123.6 117 49.6
THA.LOC104815294 Tarenaya hassleriana HOM05D005008 ORTHO05D006092 1.9e-26 123.2 120 48.3
Cfa010212 Carpinus fangiana HOM05D005008 ORTHO05D006092 2.5e-26 122.9 122 49.2
Cc01_g07910 Coffea canephora HOM05D005008 ORTHO05D006092 2.5e-26 122.9 119 48.7
Gohir.A08G007400 Gossypium hirsutum HOM05D005008 ORTHO05D006092 2.5e-26 122.9 116 50.9
Prupe.6G148300 Prunus persica HOM05D005008 ORTHO05D006092 2.5e-26 122.9 122 48.4
A08p35120 Brassica napus HOM05D005008 ORTHO05D006092 3.2e-26 122.5 124 48.4
Thhalv10019305m.g Eutrema salsugineum HOM05D005008 ORTHO05D006092 3.2e-26 122.5 120 49.2
Lsat_1_v5_gn_6_104840 Lactuca sativa HOM05D005008 ORTHO05D006092 3.2e-26 122.5 103 55.3
TPR.G38259 Trifolium pratense HOM05D005008 ORTHO05D006092 3.2e-26 122.5 119 50.4
vmacro04058 Vaccinium macrocarpon HOM05D005008 ORTHO05D006092 3.2e-26 122.5 121 49.6
ClCG03G012390 Citrullus lanatus HOM05D005008 ORTHO05D006092 4.2e-26 122.1 119 47.9
MD03G1160100 Malus domestica HOM05D005008 ORTHO05D006092 4.2e-26 122.1 122 47.5
GSVIVG01028464001 Vitis vinifera HOM05D005008 ORTHO05D006092 4.2e-26 122.1 121 47.1
BcaB03g13330 Brassica carinata HOM05D005008 ORTHO05D006092 5.5e-26 121.7 124 47.6
Gohir.D08G017500 Gossypium hirsutum HOM05D005008 ORTHO05D006092 5.5e-26 121.7 116 50.9
Gorai.004G011900 Gossypium raimondii HOM05D005008 ORTHO05D006092 5.5e-26 121.7 116 50.9
Psat7g129160 Pisum sativum HOM05D005008 ORTHO05D006092 5.5e-26 121.7 119 49.6
Carub.0001s0784 Capsella rubella HOM05D005008 ORTHO05D006092 9.3e-26 120.9 124 46.8
VMungo0251G1441 Vigna mungo HOM05D005008 ORTHO05D006092 9.3e-26 120.9 119 51.3
Lalb_Chr16g0385131 Lupinus albus HOM05D005008 ORTHO05D006092 1.2e-25 120.6 119 47.9
A06p05480 Brassica napus HOM05D005008 ORTHO05D006092 2.1e-25 119.8 120 47.5
BraA06t23756Z Brassica rapa HOM05D005008 ORTHO05D006092 2.1e-25 119.8 120 47.5
Sabra09G0000700 Salix brachista HOM05D005008 ORTHO05D006092 2.7e-25 119.4 112 49.1
TPR.G27448 Trifolium pratense HOM05D005008 ORTHO05D006092 2.7e-25 119.4 119 48.7
Lalb_Chr05g0219631 Lupinus albus HOM05D005008 ORTHO05D006092 3.6e-25 119.0 119 47.9
MSTRG.18800 Avicennia marina HOM05D005008 ORTHO05D006092 4.6e-25 118.6 116 47.4
ECA246G4934 Erigeron canadensis HOM05D005008 ORTHO05D006092 6.1e-25 118.2 95 57.9
HanXRQChr05g0163331 Helianthus annuus HOM05D005008 ORTHO05D006092 6.1e-25 118.2 102 53.9
Aa31LG5G14080 Aethionema arabicum HOM05D005008 ORTHO05D006092 7.9e-25 117.9 120 47.5
MSTRG.21002 Avicennia marina HOM05D005008 ORTHO05D006092 7.9e-25 117.9 112 50.0
Glyma.20G018300 Glycine max HOM05D005008 ORTHO05D006092 7.9e-25 117.9 119 47.9
AT1G08480 Arabidopsis thaliana HOM05D005008 ORTHO05D006092 1.8e-24 116.7 120 45.8
Lj2g0024950 Lotus japonicus HOM05D005008 ORTHO05D006092 3.0e-24 115.9 119 47.1
Oeu031444.1 Olea europaea HOM05D005008 ORTHO05D006092 3.9e-24 115.5 117 45.3
Zm00001eb173990 Zea mays HOM05D005008 ORTHO05D006092 3.9e-24 115.5 121 44.6
Medtr4g084320 Medicago truncatula HOM05D005008 ORTHO05D006092 5.1e-24 115.2 150 42.7
BcaB07g34092 Brassica carinata HOM05D005008 ORTHO05D006092 6.7e-24 114.8 120 45.0
C05p06590 Brassica napus HOM05D005008 ORTHO05D006092 6.7e-24 114.8 120 45.0
BolC5t29419H Brassica oleracea HOM05D005008 ORTHO05D006092 6.7e-24 114.8 120 45.0
CARHR008370 Cardamine hirsuta HOM05D005008 ORTHO05D006092 6.7e-24 114.8 118 45.8
Potri.009G001100 Populus trichocarpa HOM05D005008 ORTHO05D006092 1.1e-23 114.0 112 47.3
TWI31G0222 Tripterygium wilfordii HOM05D005008 ORTHO05D006092 1.1e-23 114.0 127 45.7
Zm00001eb260600 Zea mays HOM05D005008 ORTHO05D006092 1.1e-23 114.0 120 44.2
Phvul.002G096700 Phaseolus vulgaris HOM05D005008 ORTHO05D006092 1.9e-23 113.2 119 47.9
arahy.Tifrunner.gnm1.ann1.LRUS99 Arachis hypogaea HOM05D005008 ORTHO05D006092 5.7e-23 111.7 118 46.6
COL.COLO4_25364 Corchorus olitorius HOM05D005008 ORTHO05D006092 7.4e-23 111.3 107 50.5
Aa31LG2G20300 Aethionema arabicum HOM05D005008 ORTHO05D006092 1.3e-22 110.5 122 43.4
Os08g0112800 Oryza sativa ssp. japonica HOM05D005008 ORTHO05D006092 1.3e-22 110.5 119 43.7
AL1G18910 Arabidopsis lyrata HOM05D005008 ORTHO05D006092 1.1e-21 107.5 137 41.6
arahy.Tifrunner.gnm1.ann1.0IE2SQ Arachis hypogaea HOM05D005008 ORTHO05D006092 1.8e-21 106.7 118 45.8
Atru.chr5.2770 Acer truncatum HOM05D005008 ORTHO05D006092 4.1e-21 105.5 89 57.3
SEGI_09212 Sequoiadendron giganteum HOM05D005008 ORTHO05D006092 4.1e-21 105.5 147 40.1
HPP92_002034 Vanilla planifolia HOM05D005008 ORTHO05D006092 1.7e-19 100.1 119 39.5
arahy.Tifrunner.gnm1.ann1.L1LZAQ Arachis hypogaea HOM05D005008 ORTHO05D006092 2.9e-19 99.4 119 43.7
Nn1g08680 Nelumbo nucifera HOM05D005008 ORTHO05D006092 2.9e-19 99.4 81 56.8
SalBow6G2115 Salvia bowleyana HOM05D005008 ORTHO05D006092 1.1e-18 97.4 80 57.5
QL02p021765 Quercus lobata HOM05D005008 ORTHO05D006092 2.7e-17 92.8 191 31.9
arahy.Tifrunner.gnm1.ann1.67HGNM Arachis hypogaea HOM05D005008 ORTHO05D006092 1.4e-16 90.5 99 45.5
Mapoly0024s0049 Marchantia polymorpha HOM05D005008 ORTHO05D006092 5.1e-16 88.6 101 44.6
Haze_23598 Corylus avellana HOM05D005008 ORTHO05D006092 6.7e-16 88.2 102 44.1
FvH4_5g32770 Fragaria vesca HOM05D005008 ORTHO05D006092 6.7e-16 88.2 82 54.9
Ah.01g003330 Amaranthus hybridus HOM05D005008 ORTHO05D006092 1.1e-15 87.4 205 29.3
Pp3c7_24330 Physcomitrium patens HOM05D005008 ORTHO05D006092 9.1e-13 77.8 95 43.2
AUR62020205 Chenopodium quinoa HOM05D005008 ORTHO05D006092 2.0e-12 76.6 70 50.0
Pp3c1_6020 Physcomitrium patens HOM05D005008 ORTHO05D006092 4.5e-12 75.5 95 41.1
CBR_g29511 Chara braunii HOM05D005008 ORTHO05D006092 4.2e-10 68.9 101 35.6
BcaB07g32561 Brassica carinata HOM05D005008 ORTHO05D006092 2.3e-08 63.2 89 40.4
Sed0017043 Sechium edule HOM05D005008 ORTHO05D006092 2.3e-08 63.2 54 50.0


User provided reference genes

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