Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 4.5e-225 784.3 391 100.0
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 5.5e-207 724.2 391 91.8
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 3.1e-170 602.1 380 77.6
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 5.4e-170 601.3 382 77.0
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 5.4e-170 601.3 381 78.2
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 1.6e-169 599.7 386 75.6
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 7.7e-169 597.4 380 77.1
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 1.7e-168 596.3 389 76.6
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 6.6e-168 594.3 380 77.1
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 2.5e-167 592.4 380 75.8
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 2.5e-167 592.4 384 77.3
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 5.6e-167 591.3 380 76.3
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 2.8e-166 589.0 379 75.5
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 2.8e-166 589.0 380 76.1
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 3.6e-166 588.6 379 77.0
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 6.1e-166 587.8 380 76.1
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 8.0e-166 587.4 379 76.8
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 1.0e-165 587.0 381 75.3
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 1.0e-165 587.0 385 75.6
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 1.4e-165 586.6 380 76.3
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 1.4e-165 586.6 381 75.1
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 1.8e-165 586.3 380 74.7
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 1.8e-165 586.3 381 75.9
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 2.3e-165 585.9 380 75.0
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 5.2e-165 584.7 381 75.1
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 8.9e-165 583.9 380 75.8
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 2.0e-164 582.8 379 74.9
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 2.0e-164 582.8 379 75.2
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 2.6e-164 582.4 379 74.7
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 3.4e-164 582.0 385 73.5
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 4.4e-164 581.6 389 73.5
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 4.4e-164 581.6 380 76.3
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 7.5e-164 580.9 380 74.7
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 7.5e-164 580.9 384 74.5
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 9.8e-164 580.5 385 73.5
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.7e-163 579.7 385 73.8
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 2.2e-163 579.3 388 74.2
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 1.1e-162 577.0 385 73.2
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 1.1e-162 577.0 378 73.8
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 1.1e-162 577.0 381 74.5
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 1.1e-162 577.0 381 74.5
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 1.4e-162 576.6 389 72.8
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 1.8e-162 576.2 389 72.8
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 1.8e-162 576.2 381 74.5
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 2.4e-162 575.9 383 73.6
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 3.2e-162 575.5 381 75.3
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 5.4e-162 574.7 379 74.9
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 9.2e-162 573.9 380 75.0
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.7e-161 572.4 381 74.5
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 2.7e-161 572.4 381 74.0
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 7.8e-161 570.9 385 73.5
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 1.0e-160 570.5 379 73.6
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 1.7e-160 569.7 381 73.8
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 2.3e-160 569.3 378 72.5
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 2.9e-160 568.9 380 73.9
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 6.6e-160 567.8 379 72.3
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 1.5e-159 566.6 379 72.8
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 2.5e-159 565.8 377 72.4
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 4.3e-159 565.1 378 73.0
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 2.8e-158 562.4 379 71.8
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 4.7e-158 561.6 380 72.1
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 6.8e-157 557.8 378 72.8
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 8.9e-157 557.4 378 72.8
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.5e-156 556.6 383 72.8
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 9.8e-156 553.9 395 70.4
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 1.3e-155 553.5 379 71.8
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 3.7e-155 552.0 410 69.8
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 1.9e-154 549.7 377 72.4
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 1.9e-154 549.7 378 70.6
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 3.2e-154 548.9 379 71.5
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 1.2e-153 547.0 384 70.8
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 1.2e-153 547.0 393 71.0
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 2.0e-153 546.2 379 71.5
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 2.7e-153 545.8 384 70.6
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 3.5e-153 545.4 378 72.0
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 3.5e-153 545.4 379 71.5
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 4.6e-153 545.0 379 71.8
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 4.6e-153 545.0 369 72.1
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 3.9e-152 542.0 379 71.5
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 2.5e-151 539.3 392 69.6
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 9.5e-151 537.3 382 70.7
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 6.2e-150 534.6 380 69.2
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 2.3e-141 506.1 369 68.3
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 3.1e-141 505.8 380 67.1
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 2.9e-139 499.2 317 77.6
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 4.1e-138 495.4 314 77.7
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 1.3e-136 490.3 381 63.3
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 9.6e-135 484.2 380 63.9
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 6.2e-134 481.5 298 78.5
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 1.8e-133 479.9 383 64.5
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 2.4e-133 479.6 298 78.2
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 2.0e-132 476.5 390 62.1
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 1.3e-128 463.8 276 81.2
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 1.6e-121 440.3 323 68.4
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 1.3e-120 437.2 270 78.1
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 2.8e-110 402.9 254 78.3
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 3.0e-104 382.9 349 57.6
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 2.5e-103 379.8 226 79.6
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 8.2e-102 374.8 241 76.3
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 2.0e-100 370.2 230 77.0
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 6.7e-72 275.4 188 70.2
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 3.7e-62 243.0 226 58.0
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 5.0e-43 179.5 114 75.4
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 6.2e-41 172.6 127 66.1
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 2.3e-40 170.6 126 67.5
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 6.4e-38 162.5 132 65.2
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 1.1e-37 161.8 123 67.5
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.9e-37 161.0 118 68.6
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.9e-37 161.0 118 68.6
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 4.6e-36 156.4 132 63.6
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 1.3e-27 128.3 95 66.3
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 1.1e-26 125.2 109 59.6
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 4.7e-17 93.2 69 63.8
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 1.4e-13 81.6 55 67.3
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 2.4e-13 80.9 55 65.5
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 5.4e-13 79.7 55 65.5
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 3.0e-11 73.9 55 60.0
Pp3s34_460 Physcomitrium patens HOM05D001684 ORTHO05D018939 8.7e-11 72.4 287 26.1
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 3.3e-10 70.5 232 27.2
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 5.6e-10 69.7 60 53.3
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 3.8e-06 57.0 34 70.6
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 6.4e-06 56.2 204 25.0


User provided reference genes

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