Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 0.0e+00 1649.8 958 100.0
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 0.0e+00 1592.4 963 96.9
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 2.8e-188 663.3 955 51.1
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 1.8e-182 644.0 954 50.5
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 3.6e-175 619.8 943 49.5
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 8.5e-169 598.6 963 43.9
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 6.3e-164 582.4 798 53.6
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 2.3e-158 563.9 782 50.6
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 2.6e-157 560.5 942 46.8
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 2.6e-157 560.5 811 52.0
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 7.5e-157 558.9 942 46.7
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 8.3e-156 555.4 790 52.5
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 2.3e-153 547.4 836 48.0
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 1.5e-152 544.7 785 50.8
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 3.3e-152 543.5 810 51.0
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 4.7e-151 539.7 847 49.6
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 6.1e-151 539.3 810 50.6
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 3.0e-150 537.0 821 50.2
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 3.4e-149 533.5 808 49.6
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 5.7e-149 532.7 810 51.4
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 5.7e-149 532.7 818 50.6
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 9.8e-149 531.9 814 51.6
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 1.1e-147 528.5 808 49.8
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 1.8e-147 527.7 797 49.7
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 3.1e-147 526.9 961 44.5
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 5.9e-146 522.7 943 45.8
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 1.3e-145 521.5 780 51.9
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 6.6e-145 519.2 807 51.3
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 4.3e-144 516.5 821 50.3
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 1.2e-143 515.0 787 49.0
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 2.8e-143 513.8 870 44.9
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 6.1e-143 512.7 803 49.6
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 8.0e-143 512.3 966 43.3
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 1.4e-142 511.5 978 45.6
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 3.1e-142 510.4 962 44.1
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 3.1e-142 510.4 796 44.2
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 2.6e-141 507.3 799 48.7
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 2.6e-141 507.3 789 49.4
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 3.4e-141 506.9 789 49.7
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 4.4e-141 506.5 857 48.5
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 7.5e-141 505.8 966 43.0
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 2.2e-140 504.2 830 46.9
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 2.9e-140 503.8 848 46.8
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 3.7e-140 503.4 793 49.2
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 6.4e-140 502.7 966 43.5
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 1.4e-139 501.5 995 41.7
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 2.4e-139 500.7 966 44.7
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 2.4e-139 500.7 820 47.0
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 4.1e-139 500.0 798 49.9
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 1.2e-138 498.4 793 43.8
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 2.0e-138 497.7 792 45.2
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 5.6e-136 489.6 803 47.4
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 3.6e-135 486.9 781 42.4
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 3.1e-134 483.8 819 46.0
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 3.1e-134 483.8 786 49.7
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 4.0e-134 483.4 774 44.3
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 5.2e-134 483.0 702 52.4
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 6.8e-134 482.6 771 44.2
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 1.2e-133 481.9 801 43.1
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 3.4e-133 480.3 814 47.5
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 3.4e-133 480.3 785 48.9
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 3.4e-133 480.3 850 45.1
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 5.8e-133 479.6 807 46.0
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 7.5e-133 479.2 807 47.5
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 7.5e-133 479.2 778 50.0
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 7.5e-133 479.2 809 49.6
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 1.3e-132 478.4 808 45.9
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 1.7e-132 478.0 813 47.4
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 4.1e-131 473.4 806 41.3
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 1.6e-130 471.5 805 44.6
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 2.7e-130 470.7 962 42.7
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.0e-129 468.8 857 46.0
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 8.6e-129 465.7 857 45.5
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 1.1e-128 465.3 817 42.8
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 1.9e-128 464.5 811 49.8
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 2.5e-128 464.2 784 49.6
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 4.3e-128 463.4 826 48.1
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 1.6e-127 461.5 806 47.1
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.6e-127 461.5 784 49.6
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 8.1e-127 459.1 779 48.5
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 4.0e-126 456.8 969 40.9
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 5.2e-126 456.4 803 48.6
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 6.8e-126 456.1 780 42.1
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 9.9e-125 452.2 841 44.2
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 2.2e-124 451.1 799 40.6
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 4.9e-124 449.9 851 45.6
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 8.3e-124 449.1 776 45.6
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 9.2e-123 445.7 821 42.4
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 2.3e-121 441.0 863 43.8
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 1.1e-120 438.7 768 48.4
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 2.5e-120 437.6 837 43.0
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 2.5e-120 437.6 837 43.1
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 2.5e-120 437.6 672 52.2
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 2.5e-120 437.6 866 42.3
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 1.6e-119 434.9 833 43.2
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 1.6e-119 434.9 867 42.1
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 2.8e-119 434.1 836 44.1
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 3.6e-119 433.7 833 43.2
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.5e-117 428.3 787 46.3
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 5.4e-115 419.9 897 39.1
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 2.3e-113 414.5 784 45.4
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 2.5e-112 411.0 667 48.4
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 2.8e-111 407.5 787 47.0
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 1.0e-105 389.0 814 43.6
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 4.3e-104 383.6 616 42.7
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 8.4e-100 369.4 782 38.9
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 1.5e-96 358.6 588 53.1
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 2.0e-93 348.2 888 37.7
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 1.9e-83 315.1 460 45.9
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 3.2e-83 314.3 859 33.1
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 4.5e-61 240.7 505 38.6
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 6.5e-60 236.9 498 37.3
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 3.2e-59 234.6 498 37.6
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 1.8e-54 218.8 594 31.6
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 2.2e-52 211.8 822 31.3
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 3.8e-52 211.1 709 36.7
GSVIVG01007185001 Vitis vinifera HOM05D005855 ORTHO05D006406 1.6e-42 179.1 363 37.5
Pp3c3_24970 Physcomitrium patens HOM05D005855 ORTHO05D006406 2.7e-42 178.3 352 37.2
Cpa.g.c37190 Carica papaya HOM05D005855 ORTHO05D006406 1.1e-35 156.4 180 47.8
arahy.Tifrunner.gnm1.ann1.X0XBNQ Arachis hypogaea HOM05D005855 ORTHO05D006406 1.5e-35 156.0 214 46.3
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 6.8e-33 147.1 428 31.8
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 1.5e-32 146.0 464 31.0
GSVIVG01007186001 Vitis vinifera HOM05D005855 ORTHO05D006406 3.7e-31 141.4 112 60.7
VMungo1383G0582 Vigna mungo HOM05D005855 ORTHO05D000818 6.2e-26 124.0 209 36.8
CBR_g39948 Chara braunii HOM05D005855 ORTHO05D006406 3.7e-23 114.8 173 46.8
TPR.G32502 Trifolium pratense HOM05D005855 ORTHO05D006406 8.6e-20 103.6 143 44.1
Zm00001eb310680 Zea mays HOM05D000012 ORTHO05D006406 8.6e-20 103.6 164 45.1
Zm00001eb381860 Zea mays HOM05D000012 ORTHO05D006406 5.4e-14 84.3 94 50.0
Zm00001eb367440 Zea mays HOM05D005855 ORTHO05D006406 1.7e-12 79.3 110 46.4
Ah.06g195260 Amaranthus hybridus HOM05D005855 ORTHO05D006406 1.1e-09 70.1 123 39.0
Nn8g40536 Nelumbo nucifera HOM05D005855 ORTHO05D006406 3.1e-09 68.6 86 44.2
Lju114A5T28 Lonicera japonica HOM05D005855 ORTHO05D006406 1.7e-07 62.8 182 33.0
Cre12.g550152 Chlamydomonas reinhardtii HOM05D005855 ORTHO05D006406 2.9e-07 62.0 157 32.5
MSTRG.340 Avicennia marina HOM05D005855 ORTHO05D006406 1.1e-06 60.1 116 41.4


User provided reference genes

Program Settings