Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3988 Papaver somniferum HOM05D005869 ORTHO05D007229 1.1e-170 603.2 302 100.0
PSO478G4440 Papaver somniferum HOM05D005869 ORTHO05D007229 7.8e-161 570.5 302 96.0
TAR622G0237 Trochodendron aralioides HOM05D005869 ORTHO05D007229 1.5e-111 406.8 297 69.7
Nn4g22166 Nelumbo nucifera HOM05D005869 ORTHO05D007229 5.3e-109 398.3 301 68.8
Aqoxy5G03171 Aquilegia oxysepala HOM05D005869 ORTHO05D007229 7.0e-101 371.3 292 65.4
Gohir.D02G175000 Gossypium hirsutum HOM05D005869 ORTHO05D007229 7.7e-100 367.9 298 62.1
Potri.003G163800 Populus trichocarpa HOM05D005869 ORTHO05D007229 1.3e-99 367.1 297 62.6
Gorai.005G196600 Gossypium raimondii HOM05D005869 ORTHO05D007229 2.9e-99 365.9 300 62.3
Gohir.A03G152800 Gossypium hirsutum HOM05D005869 ORTHO05D007229 8.5e-99 364.4 298 61.4
Hma1.2p1_1834F.1_g304595 Hydrangea macrophylla HOM05D005869 ORTHO05D007229 1.1e-98 364.0 299 65.9
RcHm_v2.0_Chr4g0429061 Rosa chinensis HOM05D005869 ORTHO05D007229 1.1e-98 364.0 298 60.7
GSVIVG01004938001 Vitis vinifera HOM05D005869 ORTHO05D007229 9.4e-98 360.9 301 62.8
Duzib132G0160 Durio zibethinus HOM05D005869 ORTHO05D007229 3.6e-97 359.0 300 60.7
Ciclev10032244m.g Citrus clementina HOM05D005869 ORTHO05D007229 6.1e-97 358.2 298 62.1
Sopen12g020650 Solanum pennellii HOM05D005869 ORTHO05D007229 8.0e-97 357.8 292 63.7
Prupe.1G217100 Prunus persica HOM05D005869 ORTHO05D007229 1.0e-96 357.5 298 59.1
Solyc12g041880.2 Solanum lycopersicum HOM05D005869 ORTHO05D007229 1.4e-96 357.1 292 64.0
Atru.chr11.2424 Acer truncatum HOM05D005869 ORTHO05D007229 3.0e-96 355.9 295 61.0
CiPaw.05G102600 Carya illinoinensis HOM05D005869 ORTHO05D007229 3.0e-96 355.9 319 58.3
Thecc.02G194400 Theobroma cacao HOM05D005869 ORTHO05D007229 3.0e-96 355.9 298 60.4
Manes.08G102300 Manihot esculenta HOM05D005869 ORTHO05D007229 5.2e-96 355.1 292 62.7
FvH4_4g22830 Fragaria vesca HOM05D005869 ORTHO05D007229 2.6e-95 352.8 297 60.6
TWI36G0175 Tripterygium wilfordii HOM05D005869 ORTHO05D007229 3.4e-95 352.4 297 61.3
Actinidia09599 Actinidia chinensis HOM05D005869 ORTHO05D007229 2.8e-94 349.4 292 63.4
PGSC0003DMG400014477 Solanum tuberosum HOM05D005869 ORTHO05D007229 2.8e-94 349.4 295 63.7
CARHR027570 Cardamine hirsuta HOM05D005869 ORTHO05D007229 6.3e-94 348.2 291 60.5
Potri.001G066000 Populus trichocarpa HOM05D005869 ORTHO05D007229 6.3e-94 348.2 296 62.2
BcaC06g35333 Brassica carinata HOM05D005869 ORTHO05D007229 8.3e-94 347.8 291 59.5
Sabra01G0045900 Salix brachista HOM05D005869 ORTHO05D007229 8.3e-94 347.8 301 62.1
Duzib052G0289 Durio zibethinus HOM05D005869 ORTHO05D007229 2.4e-93 346.3 296 60.8
CSS0039203 Camellia sinensis var. sinensis HOM05D005869 ORTHO05D007229 4.1e-93 345.5 308 59.7
Sp1g24290 Schrenkiella parvula HOM05D005869 ORTHO05D007229 4.1e-93 345.5 291 58.4
Rhsim12G0098100 Rhododendron simsii HOM05D005869 ORTHO05D007229 2.7e-92 342.8 306 62.1
Thhalv10008411m.g Eutrema salsugineum HOM05D005869 ORTHO05D007229 3.5e-92 342.4 291 58.4
MD13G1129300 Malus domestica HOM05D005869 ORTHO05D007229 3.5e-92 342.4 294 60.9
Carub.0001s2653 Capsella rubella HOM05D005869 ORTHO05D007229 1.3e-91 340.5 291 58.1
A07p11480 Brassica napus HOM05D005869 ORTHO05D007229 1.7e-91 340.1 300 57.7
AL1G41620 Arabidopsis lyrata HOM05D005869 ORTHO05D007229 2.9e-91 339.3 291 58.4
THA.LOC104820535 Tarenaya hassleriana HOM05D005869 ORTHO05D007229 2.9e-91 339.3 298 57.0
AT1G28100 Arabidopsis thaliana HOM05D005869 ORTHO05D007229 5.0e-91 338.6 291 59.1
Migut.K01077 Erythranthe guttata HOM05D005869 ORTHO05D007229 2.5e-90 336.3 295 60.7
C07p17290 Brassica napus HOM05D005869 ORTHO05D007229 5.5e-90 335.1 291 58.1
Nitab4.5_0002899g0010 Nicotiana tabacum HOM05D005869 ORTHO05D007229 7.2e-90 334.7 300 61.0
vmacro16076 Vaccinium macrocarpon HOM05D005869 ORTHO05D007229 7.2e-90 334.7 319 58.6
TPR.G35001 Trifolium pratense HOM05D005869 ORTHO05D007229 1.2e-89 334.0 296 57.4
BraA07t28937Z Brassica rapa HOM05D005869 ORTHO05D007229 3.6e-89 332.4 309 56.0
MD16G1129300 Malus domestica HOM05D005869 ORTHO05D007229 1.0e-88 330.9 283 60.4
Cc11_g15130 Coffea canephora HOM05D005869 ORTHO05D007229 8.8e-88 327.8 281 59.8
Medtr2g072940 Medicago truncatula HOM05D005869 ORTHO05D007229 1.2e-87 327.4 293 58.4
BolC7t42232H Brassica oleracea HOM05D005869 ORTHO05D007229 1.5e-87 327.0 300 56.3
Glyma.13G264200 Glycine max HOM05D005869 ORTHO05D007229 1.5e-87 327.0 299 57.5
PGR102G3220 Punica granatum HOM05D005869 ORTHO05D007229 1.5e-87 327.0 293 56.3
Eucgr.B03550 Eucalyptus grandis HOM05D005869 ORTHO05D007229 3.4e-87 325.9 271 60.9
CDE05G0434 Ceratophyllum demersum HOM05D005869 ORTHO05D007229 5.7e-87 325.1 298 57.7
ATR0829G022 Amborella trichopoda HOM05D005869 ORTHO05D007229 1.3e-86 323.9 295 58.6
Phvul.005G075700 Phaseolus vulgaris HOM05D005869 ORTHO05D007229 8.3e-86 321.2 299 55.9
Oeu044507.2 Olea europaea HOM05D005869 ORTHO05D007229 1.4e-85 320.5 305 56.4
ClCG07G011870 Citrullus lanatus HOM05D005869 ORTHO05D007229 2.4e-85 319.7 293 58.7
CsaV3_4G002340 Cucumis sativus L. HOM05D005869 ORTHO05D007229 9.1e-85 317.8 292 58.6
EL10Ac6g13596 Beta vulgaris HOM05D005869 ORTHO05D007229 2.7e-84 316.2 290 55.5
Lalb_Chr25g0285611 Lupinus albus HOM05D005869 ORTHO05D007229 2.7e-84 316.2 303 55.1
MELO3C017808.2 Cucumis melo HOM05D005869 ORTHO05D007229 3.5e-84 315.8 294 57.8
Lj3g0004461 Lotus japonicus HOM05D005869 ORTHO05D007229 4.5e-84 315.5 295 53.6
BcaB07g32415 Brassica carinata HOM05D005869 ORTHO05D007229 1.3e-83 313.9 294 56.1
Manes.09G187100 Manihot esculenta HOM05D005869 ORTHO05D007229 2.9e-83 312.8 217 68.2
Peaxi162Scf00128g01773 Petunia axillaris HOM05D005869 ORTHO05D007229 3.8e-83 312.4 275 61.5
Sed0007329 Sechium edule HOM05D005869 ORTHO05D007229 3.8e-83 312.4 294 56.5
arahy.Tifrunner.gnm1.ann1.WRPQ8T Arachis hypogaea HOM05D005869 ORTHO05D007229 1.5e-82 310.5 302 55.0
Psat1g007680 Pisum sativum HOM05D005869 ORTHO05D007229 1.9e-82 310.1 291 53.6
arahy.Tifrunner.gnm1.ann1.3C70LE Arachis hypogaea HOM05D005869 ORTHO05D007229 3.3e-82 309.3 302 55.0
HanXRQChr08g0210441 Helianthus annuus HOM05D005869 ORTHO05D007229 3.3e-82 309.3 297 56.6
MSTRG.8047 Avicennia marina HOM05D005869 ORTHO05D007229 4.2e-82 308.9 294 55.4
A09p37960 Brassica napus HOM05D005869 ORTHO05D007229 5.6e-82 308.5 296 54.1
C05p26800 Brassica napus HOM05D005869 ORTHO05D007229 5.6e-82 308.5 308 52.9
HPP92_000723 Vanilla planifolia HOM05D005869 ORTHO05D007229 6.1e-81 305.1 306 53.3
BraA09t39308Z Brassica rapa HOM05D005869 ORTHO05D007229 1.8e-80 303.5 313 51.8
ECA233G2015 Erigeron canadensis HOM05D005869 ORTHO05D007229 1.8e-80 303.5 301 54.5
Zm00001eb044420 Zea mays HOM05D005869 ORTHO05D007229 2.3e-80 303.1 287 56.4
Ah.03g135600 Amaranthus hybridus HOM05D005869 ORTHO05D007229 4.0e-80 302.4 295 54.9
VMungo1080G1469 Vigna mungo HOM05D005869 ORTHO05D007229 1.2e-79 300.8 278 57.6
BcaC05g26814 Brassica carinata HOM05D005869 ORTHO05D007229 5.7e-79 298.5 286 54.9
HanXRQChr12g0363371 Helianthus annuus HOM05D005869 ORTHO05D007229 1.3e-78 297.4 297 53.9
BolC5t31401H Brassica oleracea HOM05D005869 ORTHO05D007229 2.7e-76 289.7 284 54.2
MBI11_g11870_MAGBIO Magnolia biondii HOM05D000422 ORTHO05D001248 1.4e-72 277.3 298 55.4
Aa31sc1106G20 Aethionema arabicum HOM05D005869 ORTHO05D007229 9.2e-69 264.6 346 43.4
Lj6A836G36 Lonicera japonica HOM05D005869 ORTHO05D007229 1.5e-66 257.3 292 52.1
CANSAT01G1948 Cannabis sativa HOM05D005869 ORTHO05D007229 2.1e-65 253.4 254 52.4
QL03p049767 Quercus lobata HOM05D005869 ORTHO05D007229 1.4e-64 250.8 173 69.4
Cpa.g.sc498.3 Carica papaya HOM05D005869 ORTHO05D007229 3.1e-64 249.6 173 69.9
BcaB03g13954 Brassica carinata HOM05D005869 ORTHO05D007229 1.5e-63 247.3 171 66.1
Sed0028093 Sechium edule HOM05D005869 ORTHO05D007229 1.5e-63 247.3 314 47.8
Pp3c14_12070 Physcomitrium patens HOM05D005869 ORTHO05D007229 2.0e-63 246.9 292 46.6
HanXRQChr08g0210391 Helianthus annuus HOM05D005869 ORTHO05D007229 2.7e-60 236.5 299 47.5
AagrBONN_evm.TU.Sc2ySwM_368.1764 Anthoceros agrestis HOM05D005869 ORTHO05D007229 1.5e-58 230.7 307 46.3
Migut.K01075 Erythranthe guttata HOM05D005869 ORTHO05D007229 3.6e-57 226.1 296 44.3
Haze_12488 Corylus avellana HOM05D005869 ORTHO05D007229 8.1e-57 224.9 285 48.8
Mapoly0153s0008 Marchantia polymorpha HOM05D005869 ORTHO05D007229 1.8e-56 223.8 286 44.8
Sabra03G0119100 Salix brachista HOM05D005869 ORTHO05D007229 6.8e-56 221.9 158 69.0
Migut.K01074 Erythranthe guttata HOM05D005869 ORTHO05D007229 5.4e-53 212.2 159 65.4
Sc04g0000040 Simmondsia chinensis HOM05D005869 ORTHO05D007229 3.9e-51 206.1 126 75.4
Sc04g0000100 Simmondsia chinensis HOM05D005869 ORTHO05D007229 5.1e-51 205.7 120 78.3
MSTRG.8048 Avicennia marina HOM05D005869 ORTHO05D007229 2.8e-49 199.9 286 41.6
AUR62005704 Chenopodium quinoa HOM05D005869 ORTHO05D007229 1.5e-47 194.1 273 44.0
Oeu019435.1 Olea europaea HOM05D005869 ORTHO05D007229 7.6e-47 191.8 292 44.9
SGA_v2.0_scaffold201G41354 Striga asiatica HOM05D005869 ORTHO05D007229 1.9e-45 187.2 302 41.1
Cre03.g194450 Chlamydomonas reinhardtii HOM05D005869 ORTHO05D007229 1.2e-44 184.5 292 40.4
MCO09G131 Micromonas commoda HOM05D005869 ORTHO05D007229 3.5e-44 183.0 293 39.9
SalBow7G3994 Salvia bowleyana HOM05D005869 ORTHO05D007229 1.7e-43 180.6 294 42.5
BcaC05g26813 Brassica carinata HOM05D005869 ORTHO05D007229 3.0e-43 179.9 103 84.5
SalBow2G1918 Salvia bowleyana HOM05D005869 ORTHO05D007229 5.6e-42 175.6 312 40.1
Nitab4.5_0000608g0060 Nicotiana tabacum HOM05D005869 ORTHO05D007229 1.4e-40 171.0 191 52.4
Os10g0499600 Oryza sativa ssp. japonica HOM05D005869 ORTHO05D007229 3.1e-40 169.9 96 82.3
FAN12G1770 Fragaria x ananassa HOM05D000001 ORTHO05D010470 5.8e-39 165.6 299 38.5
PRCOL_00000815 Prasinoderma coloniale HOM05D005869 ORTHO05D007229 1.7e-38 164.1 303 37.3
SMO115G0111 Selaginella moellendorffii HOM05D005869 ORTHO05D007229 2.2e-38 163.7 95 81.1
Dinv19137 Davidia involucrata HOM05D005869 ORTHO05D007229 2.9e-38 163.3 165 56.4
Hund16126 Selenicereus undatus HOM05D005869 ORTHO05D007229 2.9e-38 163.3 222 45.5
Lsat_1_v5_gn_4_151180 Lactuca sativa HOM05D005869 ORTHO05D007229 2.4e-37 160.2 205 44.4
CBR_g3946 Chara braunii HOM05D005869 ORTHO05D007229 9.3e-37 158.3 298 34.2
FAN07G2435 Fragaria x ananassa HOM05D000001 ORTHO05D010470 9.3e-37 158.3 332 34.0
FAN17G1058 Fragaria x ananassa HOM05D000001 ORTHO05D010470 4.6e-36 156.0 326 34.4
Migut.K01072 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.7e-35 154.1 108 64.8
Migut.O00624 Erythranthe guttata HOM05D005869 ORTHO05D007229 3.3e-34 149.8 210 42.4
Ca_03922_v3 Cicer arietinum L. HOM05D005869 ORTHO05D007229 3.8e-30 136.3 154 48.7
COL.COLO4_06415 Corchorus olitorius HOM05D005869 ORTHO05D007229 6.4e-30 135.6 161 46.0
QL03p049770 Quercus lobata HOM05D005869 ORTHO05D007229 8.1e-25 118.6 117 58.1
Migut.K01076 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.4e-24 117.9 97 58.8
unitig_26.g10430 Utricularia gibba HOM05D005869 ORTHO05D007229 7.6e-23 112.1 208 38.5
Sc04g0000090 Simmondsia chinensis HOM05D005869 ORTHO05D007229 5.1e-19 99.4 157 40.8
Sc04g0000050 Simmondsia chinensis HOM05D005869 ORTHO05D007229 8.7e-19 98.6 157 40.8
Hund16125 Selenicereus undatus HOM05D005869 ORTHO05D007229 2.8e-17 93.6 50 84.0
Actinidia34002 Actinidia chinensis HOM05D005869 ORTHO05D007229 6.9e-16 89.0 47 89.4
Glyma.12G234900 Glycine max HOM05D005869 ORTHO05D007229 3.5e-12 76.6 50 66.0
Migut.K01073 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.1e-10 71.6 109 42.2
arahy.Tifrunner.gnm1.ann1.6GV0UE Arachis hypogaea HOM05D001662 ORTHO05D005318 5.9e-07 59.3 50 54.0
COL.COLO4_06414 Corchorus olitorius HOM05D005869 ORTHO05D007229 5.9e-07 59.3 71 42.3


User provided reference genes

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