Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3971 Papaver somniferum HOM05D000076 ORTHO05D015584 2.9e-44 181.4 87 100.0
PSO541G5458 Papaver somniferum HOM05D000076 ORTHO05D002730 5.4e-14 80.9 51 70.6
PSO675G8678 Papaver somniferum HOM05D000076 ORTHO05D002730 5.4e-14 80.9 51 70.6
Sp1g19940 Schrenkiella parvula HOM05D000076 ORTHO05D002730 9.6e-11 70.1 63 54.0
GSVIVG01009080001 Vitis vinifera HOM05D000076 ORTHO05D002730 2.1e-10 68.9 48 60.4
AL1G35980 Arabidopsis lyrata HOM05D000076 ORTHO05D002730 2.8e-10 68.6 48 62.5
Actinidia10344 Actinidia chinensis HOM05D000076 ORTHO05D002730 3.6e-10 68.2 48 62.5
Actinidia30794 Actinidia chinensis HOM05D000076 ORTHO05D021102 3.6e-10 68.2 48 62.5
COL.COLO4_12013 Corchorus olitorius HOM05D000076 ORTHO05D002730 3.6e-10 68.2 48 60.4
Haze_18271 Corylus avellana HOM05D000076 ORTHO05D002730 3.6e-10 68.2 45 66.7
Haze_18275 Corylus avellana HOM05D000076 ORTHO05D002730 3.6e-10 68.2 45 66.7
Ciclev10000706m.g Citrus clementina HOM05D000076 ORTHO05D002730 6.2e-10 67.4 48 62.5
FvH4_5g36600 Fragaria vesca HOM05D000076 ORTHO05D002730 6.2e-10 67.4 49 59.2
FAN08G3484 Fragaria x ananassa HOM05D000076 ORTHO05D002730 6.2e-10 67.4 49 59.2
FAN18G1411 Fragaria x ananassa HOM05D000076 ORTHO05D002730 6.2e-10 67.4 49 59.2
Nn1g05451 Nelumbo nucifera HOM05D000076 ORTHO05D002730 6.2e-10 67.4 48 60.4
Aqoxy6G00719 Aquilegia oxysepala HOM05D000076 ORTHO05D002730 8.1e-10 67.0 48 60.4
Duzib093G1793 Durio zibethinus HOM05D000076 ORTHO05D002730 8.1e-10 67.0 48 60.4
FAN04G0318 Fragaria x ananassa HOM05D000076 ORTHO05D015584 8.1e-10 67.0 49 59.2
Prupe.1G522600 Prunus persica HOM05D000076 ORTHO05D002730 8.1e-10 67.0 48 60.4
SalBow2G0700 Salvia bowleyana HOM05D000076 ORTHO05D002730 8.1e-10 67.0 69 46.4
SalBow2G2024 Salvia bowleyana HOM05D000076 ORTHO05D015584 8.1e-10 67.0 69 46.4
HPP92_011197 Vanilla planifolia HOM05D000076 ORTHO05D002730 8.1e-10 67.0 61 52.5
EL10Ac1g01149 Beta vulgaris HOM05D000076 ORTHO05D002730 1.1e-09 66.6 48 60.4
CARHR022800 Cardamine hirsuta HOM05D000076 ORTHO05D002730 1.1e-09 66.6 69 47.8
CDE06G2228 Ceratophyllum demersum HOM05D000076 ORTHO05D002730 1.1e-09 66.6 47 57.4
Gohir.A06G033700 Gossypium hirsutum HOM05D000076 ORTHO05D002730 1.1e-09 66.6 48 60.4
Gohir.D06G034600 Gossypium hirsutum HOM05D000076 ORTHO05D002730 1.1e-09 66.6 48 60.4
Gorai.010G038100 Gossypium raimondii HOM05D000076 ORTHO05D002730 1.1e-09 66.6 48 60.4
Lj4A97T73 Lonicera japonica HOM05D000076 ORTHO05D002730 1.1e-09 66.6 48 62.5
CSS0042131 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D002730 1.4e-09 66.2 48 60.4
Carub.0001s2199 Capsella rubella HOM05D000076 ORTHO05D002730 1.4e-09 66.2 48 58.3
Gohir.A05G265900 Gossypium hirsutum HOM05D000076 ORTHO05D002730 1.4e-09 66.2 48 56.2
MD15G1374100 Malus domestica HOM05D000076 ORTHO05D002730 1.4e-09 66.2 48 60.4
Nitab4.5_0002434g0030 Nicotiana tabacum HOM05D000076 ORTHO05D002730 1.4e-09 66.2 47 61.7
RcHm_v2.0_Chr7g0242381 Rosa chinensis HOM05D000076 ORTHO05D002730 1.4e-09 66.2 48 58.3
Duzib041G0195 Durio zibethinus HOM05D000076 ORTHO05D002730 1.8e-09 65.9 48 60.4
Thhalv10007232m.g Eutrema salsugineum HOM05D000076 ORTHO05D002730 2.4e-09 65.5 48 60.4
HanXRQChr05g0149641 Helianthus annuus HOM05D000076 ORTHO05D002730 2.4e-09 65.5 48 58.3
Hma1.2p1_1148F.1_g261610 Hydrangea macrophylla HOM05D000076 ORTHO05D002730 2.4e-09 65.5 48 60.4
Peaxi162Scf00160g10124 Petunia axillaris HOM05D000076 ORTHO05D002730 2.4e-09 65.5 47 61.7
TAR381G1259 Trochodendron aralioides HOM05D000076 ORTHO05D002730 2.4e-09 65.5 48 60.4
Gohir.D05G268000 Gossypium hirsutum HOM05D000076 ORTHO05D002730 3.1e-09 65.1 48 58.3
HPP92_011191 Vanilla planifolia HOM05D000076 ORTHO05D002730 3.1e-09 65.1 60 51.7
A09p42320 Brassica napus HOM05D000076 ORTHO05D002730 4.0e-09 64.7 49 59.2
BraA09t39713Z Brassica rapa HOM05D000076 ORTHO05D002730 4.0e-09 64.7 49 59.2
MD08G1188100 Malus domestica HOM05D000076 ORTHO05D002730 4.0e-09 64.7 48 58.3
BcaC05g26171 Brassica carinata HOM05D000076 ORTHO05D002730 5.3e-09 64.3 48 60.4
C05p21560 Brassica napus HOM05D000076 ORTHO05D002730 5.3e-09 64.3 48 60.4
BolC5t30851H Brassica oleracea HOM05D000076 ORTHO05D002730 5.3e-09 64.3 48 60.4
CANSAT25G1638 Cannabis sativa HOM05D000076 ORTHO05D002730 5.3e-09 64.3 66 50.0
CsaV3_2G029870 Cucumis sativus L. HOM05D000076 ORTHO05D002730 5.3e-09 64.3 47 57.4
Nitab4.5_0001896g0100 Nicotiana tabacum HOM05D000076 ORTHO05D002730 5.3e-09 64.3 47 59.6
Nitab4.5_0010488g0050 Nicotiana tabacum HOM05D000076 ORTHO05D002730 5.3e-09 64.3 68 47.1
Sed0019731 Sechium edule HOM05D000076 ORTHO05D002730 5.3e-09 64.3 47 57.4
TPR.G31380 Trifolium pratense HOM05D000076 ORTHO05D002730 5.3e-09 64.3 84 39.3
TAR625G0394 Trochodendron aralioides HOM05D000076 ORTHO05D002730 5.3e-09 64.3 48 58.3
AT1G22460 Arabidopsis thaliana HOM05D000076 ORTHO05D002730 6.9e-09 63.9 48 58.3
BcaB07g32257 Brassica carinata HOM05D000076 ORTHO05D002730 6.9e-09 63.9 48 60.4
CiPaw.15G046200 Carya illinoinensis HOM05D000076 ORTHO05D002730 6.9e-09 63.9 48 56.2
DCAR_012885 Daucus carota HOM05D000076 ORTHO05D002730 6.9e-09 63.9 48 58.3
Cfa017890 Carpinus fangiana HOM05D000076 ORTHO05D002730 9.0e-09 63.5 48 56.2
Thecc.08G102600 Theobroma cacao HOM05D000076 ORTHO05D002730 9.0e-09 63.5 48 58.3
ECA247G0965 Erigeron canadensis HOM05D000076 ORTHO05D002730 1.2e-08 63.2 48 58.3
Gorai.009G280200 Gossypium raimondii HOM05D000076 ORTHO05D002730 1.2e-08 63.2 48 56.2
vmacro04710 Vaccinium macrocarpon HOM05D000076 ORTHO05D002730 1.2e-08 63.2 48 56.2
Actinidia33124 Actinidia chinensis HOM05D000076 ORTHO05D002730 2.0e-08 62.4 48 56.2
Actinidia37406 Actinidia chinensis HOM05D000076 ORTHO05D002730 2.0e-08 62.4 48 56.2
CDE03G0390 Ceratophyllum demersum HOM05D000076 ORTHO05D002730 2.0e-08 62.4 47 55.3
Glyma.04G099300 Glycine max HOM05D000076 ORTHO05D002730 2.0e-08 62.4 51 52.9
Glyma.06G101200 Glycine max HOM05D000076 ORTHO05D002730 2.0e-08 62.4 51 52.9
Lsat_1_v5_gn_1_3200 Lactuca sativa HOM05D000076 ORTHO05D002730 2.0e-08 62.4 48 58.3
SGA_v2.0_scaffold28G11903 Striga asiatica HOM05D000076 ORTHO05D002730 2.0e-08 62.4 48 56.2
THA.LOC104810657 Tarenaya hassleriana HOM05D000076 ORTHO05D002730 2.0e-08 62.4 48 54.2
TPR.G24260 Trifolium pratense HOM05D000076 ORTHO05D002730 2.0e-08 62.4 78 39.7
VMungo1309G1754 Vigna mungo HOM05D000076 ORTHO05D002730 2.0e-08 62.4 51 51.0
arahy.Tifrunner.gnm1.ann1.SH9IX0 Arachis hypogaea HOM05D000076 ORTHO05D002730 2.6e-08 62.0 50 52.0
CiPaw.16G033100 Carya illinoinensis HOM05D000076 ORTHO05D002730 2.6e-08 62.0 48 52.1
ClCG11G014270 Citrullus lanatus HOM05D000076 ORTHO05D002730 2.6e-08 62.0 53 52.8
Lj4A726G67 Lonicera japonica HOM05D000076 ORTHO05D002730 2.6e-08 62.0 51 56.9
Phvul.009G032800 Phaseolus vulgaris HOM05D000076 ORTHO05D002730 2.6e-08 62.0 51 49.0
AUR62018968 Chenopodium quinoa HOM05D000076 ORTHO05D002730 3.4e-08 61.6 48 54.2
AUR62027810 Chenopodium quinoa HOM05D000076 ORTHO05D002730 3.4e-08 61.6 48 54.2
Cc10_g06710 Coffea canephora HOM05D000076 ORTHO05D002730 3.4e-08 61.6 48 56.2
Glyma.02G209100 Glycine max HOM05D000076 ORTHO05D002730 3.4e-08 61.6 48 54.2
HanXRQChr02g0040291 Helianthus annuus HOM05D000076 ORTHO05D002730 3.4e-08 61.6 46 58.7
Sc01g0000790 Simmondsia chinensis HOM05D000076 ORTHO05D002730 3.4e-08 61.6 48 56.2
Aa31LG7G6380 Aethionema arabicum HOM05D000076 ORTHO05D002730 4.4e-08 61.2 48 52.1
arahy.Tifrunner.gnm1.ann1.C5EDTH Arachis hypogaea HOM05D000076 ORTHO05D002730 4.4e-08 61.2 50 52.0
Medtr5g064620 Medicago truncatula HOM05D000076 ORTHO05D002730 4.4e-08 61.2 91 39.6
FAN13G3047 Fragaria x ananassa HOM05D000076 ORTHO05D002730 5.8e-08 60.8 49 59.2
FAN15G1409 Fragaria x ananassa HOM05D000076 ORTHO05D015584 5.8e-08 60.8 49 55.1
Glyma.14G177300 Glycine max HOM05D000076 ORTHO05D002730 5.8e-08 60.8 48 52.1
Psat2g069680 Pisum sativum HOM05D000076 ORTHO05D002730 5.8e-08 60.8 48 52.1
Hund16888 Selenicereus undatus HOM05D000076 ORTHO05D002730 5.8e-08 60.8 48 54.2
CAN.G857.12 Capsicum annuum HOM05D000076 ORTHO05D002730 7.6e-08 60.5 51 52.9
Lj1g0009652 Lotus japonicus HOM05D000076 ORTHO05D002730 7.6e-08 60.5 51 49.0
MBI05_g22322_MAGBIO Magnolia biondii HOM05D000076 ORTHO05D002730 7.6e-08 60.5 48 54.2
Nn5g30006 Nelumbo nucifera HOM05D000076 ORTHO05D002730 7.6e-08 60.5 48 56.2
TWI56G1331 Tripterygium wilfordii HOM05D000076 ORTHO05D002730 7.6e-08 60.5 46 54.3
arahy.Tifrunner.gnm1.ann1.BL38BA Arachis hypogaea HOM05D000076 ORTHO05D002730 9.9e-08 60.1 48 52.1
arahy.Tifrunner.gnm1.ann1.S2AXZ8 Arachis hypogaea HOM05D000076 ORTHO05D002730 9.9e-08 60.1 48 52.1
Oeu007453.2 Olea europaea HOM05D000076 ORTHO05D002730 9.9e-08 60.1 48 56.2
Phvul.008G176800 Phaseolus vulgaris HOM05D000076 ORTHO05D002730 9.9e-08 60.1 48 52.1
CSS0007840 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D002730 1.3e-07 59.7 48 54.2
Lalb_Chr08g0242171 Lupinus albus HOM05D000076 ORTHO05D002730 1.3e-07 59.7 50 50.0
Nitab4.5_0000786g0060 Nicotiana tabacum HOM05D000076 ORTHO05D002730 1.3e-07 59.7 51 52.9
Lalb_Chr10g0102521 Lupinus albus HOM05D000076 ORTHO05D002730 2.2e-07 58.9 48 52.1
Lalb_Chr17g0344291 Lupinus albus HOM05D000076 ORTHO05D002730 2.2e-07 58.9 48 52.1
PGR042G0574 Punica granatum HOM05D000076 ORTHO05D002730 2.2e-07 58.9 48 50.0
Lj1g0014604 Lotus japonicus HOM05D000076 ORTHO05D002730 3.8e-07 58.2 46 52.2
Manes.18G064150 Manihot esculenta HOM05D000076 ORTHO05D002730 3.8e-07 58.2 45 55.6
Medtr3g099480 Medicago truncatula HOM05D000076 ORTHO05D002730 4.9e-07 57.8 50 50.0
ATR0684G012 Amborella trichopoda HOM05D000076 ORTHO05D002730 6.4e-07 57.4 45 55.6
Eucgr.F00374 Eucalyptus grandis HOM05D000076 ORTHO05D002730 6.4e-07 57.4 48 54.2
Lalb_Chr11g0065271 Lupinus albus HOM05D000076 ORTHO05D002730 6.4e-07 57.4 50 50.0
MSTRG.22168 Avicennia marina HOM05D000076 ORTHO05D002730 8.4e-07 57.0 79 39.2
CsaV3_3G047660 Cucumis sativus L. HOM05D000076 ORTHO05D002730 8.4e-07 57.0 53 49.1
ClCG08G011300 Citrullus lanatus HOM05D000076 ORTHO05D002730 1.1e-06 56.6 55 49.1
Potri.005G161800 Populus trichocarpa HOM05D000076 ORTHO05D002730 1.1e-06 56.6 45 51.1
Sabra05G0122400 Salix brachista HOM05D000076 ORTHO05D007948 1.1e-06 56.6 45 51.1
Ca_16038_v3 Cicer arietinum L. HOM05D000076 ORTHO05D002730 1.4e-06 56.2 50 50.0
Solyc04g074670.4 Solanum lycopersicum HOM05D000076 ORTHO05D002730 1.4e-06 56.2 51 49.0
Sopen04g029640 Solanum pennellii HOM05D000076 ORTHO05D002730 1.4e-06 56.2 51 49.0
PGSC0003DMG400030835 Solanum tuberosum HOM05D000076 ORTHO05D002730 1.4e-06 56.2 51 49.0
SEGI_30537 Sequoiadendron giganteum HOM05D000076 ORTHO05D002730 2.4e-06 55.5 45 53.3
MBI02_g33227_MAGBIO Magnolia biondii HOM05D000076 ORTHO05D002730 3.2e-06 55.1 51 49.0
Mapoly0103s0076 Marchantia polymorpha HOM05D000076 ORTHO05D002730 3.2e-06 55.1 47 55.3
QL02p002473 Quercus lobata HOM05D000076 ORTHO05D002730 3.2e-06 55.1 48 50.0
Aa31sc516G50 Aethionema arabicum HOM05D000076 ORTHO05D001377 4.2e-06 54.7 68 41.2
MD08G1188000 Malus domestica HOM05D000076 ORTHO05D002730 4.2e-06 54.7 46 54.3
Manes.02G149400 Manihot esculenta HOM05D000076 ORTHO05D002730 4.2e-06 54.7 45 53.3
Ah.05g169690 Amaranthus hybridus HOM05D000076 ORTHO05D002730 7.1e-06 53.9 67 41.8
Eucgr.B00039 Eucalyptus grandis HOM05D000076 ORTHO05D002730 9.3e-06 53.5 45 53.3
MD15G1374000 Malus domestica HOM05D000076 ORTHO05D002730 9.3e-06 53.5 46 50.0


User provided reference genes

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