Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3964 Papaver somniferum HOM05D010375 ORTHO05D015177 7.9e-177 623.6 308 100.0
PSO349G0233 Papaver somniferum HOM05D010375 ORTHO05D015177 2.2e-62 243.4 248 52.8
PSO170G1413 Papaver somniferum HOM05D010375 ORTHO05D015177 3.8e-62 242.7 247 53.4
PSO478G4356 Papaver somniferum HOM05D010375 ORTHO05D015177 5.0e-62 242.3 247 53.0
PSO017G0163 Papaver somniferum HOM05D010375 ORTHO05D015177 1.7e-30 137.5 117 67.5
PSO541G4711 Papaver somniferum HOM05D010375 ORTHO05D015177 7.3e-29 132.1 183 46.4
PSO675G5178 Papaver somniferum HOM05D010375 ORTHO05D015177 2.2e-25 120.6 154 46.8
PSO700G0133 Papaver somniferum HOM05D010375 ORTHO05D015177 2.0e-23 114.0 163 44.8
PSO832G0348 Papaver somniferum HOM05D010375 ORTHO05D015177 6.6e-22 109.0 157 44.6
PSO717G0128 Papaver somniferum HOM05D010375 ORTHO05D015177 7.3e-13 79.0 68 63.2
PSO724G0748 Papaver somniferum HOM05D010375 ORTHO05D015177 7.3e-13 79.0 68 63.2
PSO724G1336 Papaver somniferum HOM05D010375 ORTHO05D015177 7.3e-13 79.0 68 63.2
Atru.chr1.522 Acer truncatum HOM05D000539 ORTHO05D000592 3.1e-11 73.6 122 35.2
Atru.chr6.155 Acer truncatum HOM05D000539 ORTHO05D000592 4.0e-11 73.2 123 37.4
PSO724G1179 Papaver somniferum HOM05D010375 ORTHO05D015177 4.0e-11 73.2 123 39.8
Ciclev10012877m.g Citrus clementina HOM05D000539 ORTHO05D000592 2.2e-09 67.4 123 38.2
Prupe.2G053400 Prunus persica HOM05D000539 ORTHO05D000592 3.7e-09 66.6 171 28.1
Rhsim08G0058500 Rhododendron simsii HOM05D000539 ORTHO05D000592 6.4e-09 65.9 175 32.0
Prupe.1G028600 Prunus persica HOM05D000539 ORTHO05D000592 8.3e-09 65.5 175 26.3
Prupe.2G011100 Prunus persica HOM05D000539 ORTHO05D000592 1.4e-08 64.7 175 25.7
Prupe.3G153900 Prunus persica HOM05D000539 ORTHO05D000592 1.4e-08 64.7 175 25.7
Prupe.7G008900 Prunus persica HOM05D000539 ORTHO05D000592 1.4e-08 64.7 175 25.7
Medtr2g060850 Medicago truncatula HOM05D002644 ORTHO05D000592 1.9e-08 64.3 170 28.2
Prupe.1G183700 Prunus persica HOM05D000539 ORTHO05D000592 1.9e-08 64.3 128 29.7
Prupe.1G036300 Prunus persica HOM05D000539 ORTHO05D000592 4.1e-08 63.2 125 31.2
Prupe.1G185000 Prunus persica HOM05D000539 ORTHO05D000592 4.1e-08 63.2 125 31.2
Prupe.2G089500 Prunus persica HOM05D000539 ORTHO05D000592 4.1e-08 63.2 125 31.2
Prupe.8G054500 Prunus persica HOM05D000539 ORTHO05D000592 4.1e-08 63.2 125 31.2
Prupe.1G397800 Prunus persica HOM05D000539 ORTHO05D000592 5.4e-08 62.8 125 31.2
Prupe.2G155700 Prunus persica HOM05D000539 ORTHO05D000233 5.4e-08 62.8 129 28.7
Prupe.5G051700 Prunus persica HOM05D000539 ORTHO05D000592 5.4e-08 62.8 125 31.2
Prupe.6G180100 Prunus persica HOM05D000539 ORTHO05D000592 5.4e-08 62.8 125 31.2
Prupe.7G057400 Prunus persica HOM05D000539 ORTHO05D000592 5.4e-08 62.8 125 31.2
RcHm_v2.0_Chr2g0147501 Rosa chinensis HOM05D000539 ORTHO05D000592 5.4e-08 62.8 175 29.1
FAN07G0213 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.1e-08 62.4 193 24.9
Prupe.2G157500 Prunus persica HOM05D000539 ORTHO05D000592 9.2e-08 62.0 129 28.7
Prupe.6G142900 Prunus persica HOM05D000539 ORTHO05D000592 9.2e-08 62.0 129 28.7
Prupe.2G062000 Prunus persica HOM05D000539 ORTHO05D000592 1.2e-07 61.6 129 28.7
Prupe.3G118800 Prunus persica HOM05D000539 ORTHO05D000592 1.2e-07 61.6 125 30.4
Prupe.1G310400 Prunus persica HOM05D000539 ORTHO05D000592 1.6e-07 61.2 125 30.4
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 2.1e-07 60.8 193 24.4
Rhsim08G0058700 Rhododendron simsii HOM05D000539 ORTHO05D000592 2.1e-07 60.8 120 34.2
Prupe.1G201000 Prunus persica HOM05D000539 ORTHO05D000592 2.7e-07 60.5 123 29.3
Prupe.4G092400 Prunus persica HOM05D000539 ORTHO05D000592 2.7e-07 60.5 123 29.3
Prupe.7G029100 Prunus persica HOM05D000539 ORTHO05D000592 2.7e-07 60.5 129 27.9
Prupe.1G199400 Prunus persica HOM05D000539 ORTHO05D000592 3.5e-07 60.1 125 30.4
Prupe.3G119600 Prunus persica HOM05D000539 ORTHO05D000592 3.5e-07 60.1 125 30.4
Prupe.4G253500 Prunus persica HOM05D000539 ORTHO05D000592 3.5e-07 60.1 125 29.6
Prupe.5G062900 Prunus persica HOM05D000539 ORTHO05D000592 3.5e-07 60.1 119 31.1
Prupe.8G059600 Prunus persica HOM05D000539 ORTHO05D000592 3.5e-07 60.1 123 29.3
Prupe.4G254700 Prunus persica HOM05D000539 ORTHO05D000233 4.6e-07 59.7 104 29.8
Prupe.7G055100 Prunus persica HOM05D000539 ORTHO05D000233 4.6e-07 59.7 96 32.3
Rhsim01G0080200 Rhododendron simsii HOM05D000539 ORTHO05D000592 7.8e-07 58.9 135 34.1
Prupe.1G174000 Prunus persica HOM05D000539 ORTHO05D000592 1.0e-06 58.5 123 29.3
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 1.3e-06 58.2 125 32.0
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 1.3e-06 58.2 125 32.0
Ciclev10003431m.g Citrus clementina HOM05D000539 ORTHO05D000233 1.7e-06 57.8 57 47.4
FAN12G1285 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.7e-06 57.8 146 26.0
Prupe.1G193900 Prunus persica HOM05D000539 ORTHO05D000592 1.7e-06 57.8 123 29.3
Prupe.2G045600 Prunus persica HOM05D000539 ORTHO05D000592 1.7e-06 57.8 125 30.4
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 1.7e-06 57.8 125 31.2
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.3e-06 57.4 124 27.4
Prupe.4G261200 Prunus persica HOM05D000539 ORTHO05D000592 2.3e-06 57.4 123 28.5
Lsat_1_v5_gn_4_34001 Lactuca sativa HOM05D000539 ORTHO05D000592 3.0e-06 57.0 165 28.5
Prupe.3G106000 Prunus persica HOM05D000539 ORTHO05D000592 3.0e-06 57.0 98 30.6
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 3.0e-06 57.0 125 33.6
RcHm_v2.0_Chr7g0228381 Rosa chinensis HOM05D000539 ORTHO05D000592 3.0e-06 57.0 119 31.9
DCAR_031226 Daucus carota HOM05D000539 ORTHO05D000592 3.9e-06 56.6 125 31.2
Prupe.3G113900 Prunus persica HOM05D000539 ORTHO05D000592 3.9e-06 56.6 170 27.1
Prupe.5G040600 Prunus persica HOM05D000539 ORTHO05D000592 3.9e-06 56.6 123 28.5
Prupe.5G060800 Prunus persica HOM05D000539 ORTHO05D000592 3.9e-06 56.6 122 28.7
RcHm_v2.0_Chr4g0407981 Rosa chinensis HOM05D000539 ORTHO05D000592 3.9e-06 56.6 124 33.1
CsaV3_6G018870 Cucumis sativus L. HOM05D000539 ORTHO05D000592 5.1e-06 56.2 121 28.9
FvH4_1g20221 Fragaria vesca HOM05D000539 ORTHO05D000233 5.1e-06 56.2 125 30.4
Prupe.1G184100 Prunus persica HOM05D000539 ORTHO05D000592 5.1e-06 56.2 102 31.4
SalBow2G3562 Salvia bowleyana HOM05D000539 ORTHO05D000592 5.1e-06 56.2 174 28.7
Ciclev10005682m.g Citrus clementina HOM05D000539 ORTHO05D000592 6.6e-06 55.8 118 36.4
MELO3C033511.2 Cucumis melo HOM05D000539 ORTHO05D000592 6.6e-06 55.8 121 34.7
PSO541G5385 Papaver somniferum HOM05D000539 ORTHO05D000233 6.6e-06 55.8 269 23.0
RcHm_v2.0_Chr1g0318241 Rosa chinensis HOM05D000539 ORTHO05D000592 6.6e-06 55.8 125 31.2
Prupe.3G107500 Prunus persica HOM05D000539 ORTHO05D000233 8.6e-06 55.5 123 28.5
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 8.6e-06 55.5 120 35.0
SalBow6G4879 Salvia bowleyana HOM05D000539 ORTHO05D000592 8.6e-06 55.5 120 33.3


User provided reference genes

Program Settings