Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 9.4e-256 886.3 442 100.0
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 3.8e-241 837.8 437 94.7
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 2.6e-221 771.9 435 90.3
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 6.6e-209 730.7 436 86.0
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 7.3e-208 727.2 439 85.6
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 2.6e-197 692.2 437 82.8
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 2.4e-195 685.6 444 80.0
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 5.4e-195 684.5 445 80.0
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 3.0e-193 678.7 442 79.9
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 7.4e-192 674.1 439 80.4
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 6.7e-185 651.0 440 76.6
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 6.2e-183 644.4 448 76.3
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 7.9e-178 627.5 439 75.4
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 6.3e-175 617.8 451 72.9
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 9.7e-144 514.2 438 61.6
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 2.0e-141 506.5 435 61.4
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 7.7e-141 504.6 440 60.0
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 8.0e-138 494.6 441 57.6
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.8e-137 493.4 434 60.4
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 1.2e-136 490.7 456 57.9
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 2.0e-136 490.0 437 59.7
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 2.2e-135 486.5 423 58.9
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 4.1e-134 482.3 435 57.5
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 4.1e-134 482.3 346 67.1
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 5.4e-134 481.9 425 60.0
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 4.5e-133 478.8 423 57.2
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.3e-132 477.2 427 58.8
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 1.1e-131 474.2 424 59.4
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 1.6e-130 470.3 429 57.8
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 6.1e-130 468.4 438 57.1
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 8.0e-130 468.0 425 58.4
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 1.4e-129 467.2 431 58.2
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.4e-129 467.2 424 57.1
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 4.0e-129 465.7 429 57.8
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 6.8e-129 464.9 429 57.3
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 6.8e-129 464.9 419 58.9
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 1.2e-128 464.2 444 56.8
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 1.5e-128 463.8 425 57.6
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 4.4e-128 462.2 428 56.8
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 4.9e-127 458.8 423 57.4
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 6.3e-127 458.4 425 54.1
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 6.3e-127 458.4 429 56.6
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 6.3e-127 458.4 427 56.4
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 8.3e-127 458.0 428 56.5
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 8.3e-127 458.0 434 54.6
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 2.4e-126 456.4 423 57.9
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 3.2e-126 456.1 419 55.6
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 3.2e-126 456.1 423 54.1
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 5.4e-126 455.3 425 55.8
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 7.0e-126 454.9 424 56.1
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 9.2e-126 454.5 426 56.1
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 1.2e-125 454.1 439 56.0
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 1.6e-125 453.8 434 55.8
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 1.6e-125 453.8 425 56.2
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 2.7e-125 453.0 425 56.5
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 7.8e-125 451.4 423 54.1
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 7.8e-125 451.4 424 54.2
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 7.8e-125 451.4 426 56.3
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.3e-124 450.7 425 56.2
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 5.0e-124 448.7 423 53.9
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 1.5e-123 447.2 426 56.1
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 1.5e-123 447.2 423 55.3
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.9e-123 446.8 444 53.2
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 3.3e-123 446.0 423 54.8
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 5.6e-123 445.3 419 54.9
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.6e-122 443.7 428 55.4
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 2.1e-122 443.4 419 54.4
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 2.1e-122 443.4 419 54.4
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 2.1e-122 443.4 419 54.4
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 2.8e-122 443.0 427 54.8
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 6.1e-122 441.8 440 55.0
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 6.1e-122 441.8 360 60.0
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 8.0e-122 441.4 426 55.9
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 8.0e-122 441.4 425 55.5
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.4e-121 440.7 426 55.2
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.8e-121 440.3 338 62.4
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 1.8e-121 440.3 428 54.2
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 4.0e-121 439.1 344 60.2
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 4.0e-121 439.1 346 61.3
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 4.0e-121 439.1 438 52.5
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 5.2e-121 438.7 346 61.0
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 1.2e-120 437.6 419 54.7
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 1.5e-120 437.2 426 53.8
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.5e-120 437.2 430 52.6
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.5e-120 437.2 428 54.2
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 2.0e-120 436.8 419 54.4
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 7.5e-120 434.9 419 54.4
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 1.3e-119 434.1 419 54.2
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 1.7e-119 433.7 423 53.2
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 2.9e-119 433.0 439 52.2
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 2.9e-119 433.0 441 52.8
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 2.9e-119 433.0 345 59.4
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 3.7e-119 432.6 440 53.0
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 4.9e-119 432.2 439 51.9
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 4.9e-119 432.2 419 53.9
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 4.9e-119 432.2 423 53.0
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 4.9e-119 432.2 394 56.9
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 6.4e-119 431.8 423 54.8
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.4e-118 430.6 345 60.3
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 5.4e-118 428.7 408 53.4
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 7.0e-118 428.3 430 52.6
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 9.2e-118 427.9 432 53.5
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 1.6e-117 427.2 423 52.0
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 6.0e-117 425.2 419 53.5
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 6.0e-117 425.2 419 53.5
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 6.0e-117 425.2 419 53.5
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 6.0e-117 425.2 426 53.1
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 7.8e-117 424.9 428 53.5
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 1.0e-116 424.5 423 53.0
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 1.3e-116 424.1 419 52.7
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 1.7e-116 423.7 419 52.7
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 1.7e-116 423.7 338 59.2
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 5.0e-116 422.2 345 59.4
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 5.0e-116 422.2 417 52.0
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 6.6e-116 421.8 347 59.7
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 1.5e-115 420.6 415 54.5
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 3.3e-115 419.5 354 60.5
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 4.3e-115 419.1 425 53.9
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 5.6e-115 418.7 341 59.5
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 9.5e-115 417.9 419 52.7
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 1.2e-114 417.5 338 58.6
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 2.8e-114 416.4 396 53.8
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 2.8e-114 416.4 388 54.4
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 8.0e-114 414.8 387 54.0
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 1.4e-113 414.1 347 57.3
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 3.4e-112 409.5 430 51.6
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 7.5e-112 408.3 317 63.4
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 1.7e-111 407.1 452 50.2
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 5.4e-110 402.1 346 56.6
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 5.4e-110 402.1 357 55.7
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.7e-109 399.8 427 48.2
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.0e-108 397.9 456 50.7
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.5e-107 394.0 329 56.5
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 1.3e-103 380.9 287 59.9
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 3.7e-103 379.4 364 53.3
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 1.1e-102 377.9 456 48.0
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 5.6e-99 365.5 340 50.6
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 9.6e-99 364.8 340 56.8
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.8e-98 363.2 339 51.0
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.1e-97 361.3 427 45.9
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 7.6e-96 355.1 427 45.7
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 2.7e-93 346.7 250 65.2
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 1.5e-91 340.9 339 48.4
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 1.5e-88 330.9 343 46.9
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 2.0e-88 330.5 438 45.9
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.6e-85 320.9 401 44.4
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 3.5e-85 319.7 364 45.3
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.3e-84 317.8 298 52.7
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 1.3e-84 317.8 385 44.4
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 3.0e-84 316.6 246 58.9
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 4.3e-83 312.8 339 47.5
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 4.8e-82 309.3 352 46.9
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 6.2e-82 308.9 348 44.5
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 9.0e-81 305.1 274 59.9
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 4.9e-79 299.3 236 59.3
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.6e-75 285.8 348 44.5
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 2.1e-74 283.9 383 42.8
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.8e-73 280.8 345 41.4
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.3e-71 274.6 351 42.2
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.2e-71 273.9 345 42.0
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 1.9e-70 270.8 236 53.0
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.9e-70 270.8 340 40.6
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 7.1e-70 268.9 236 54.7
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.5e-69 266.5 347 40.3
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 4.6e-69 266.2 299 45.2
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 1.7e-63 247.7 236 50.8
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.7e-63 247.7 342 41.8
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.7e-63 247.7 347 37.5
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 2.2e-63 247.3 239 49.4
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 2.7e-53 213.8 367 34.3
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 8.8e-36 155.6 149 53.7
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 4.4e-35 153.3 413 27.8
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 3.8e-31 140.2 153 49.0
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 6.1e-21 106.3 114 41.2
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.9e-15 87.4 129 48.1
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.3e-14 84.0 100 36.0
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.2e-13 82.0 82 45.1
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 8.9e-12 75.9 88 46.6
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.2e-11 75.5 115 37.4
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 4.9e-10 70.1 75 41.3
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 5.6e-06 56.6 42 69.0


User provided reference genes

Program Settings