Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 5.0e-249 864.0 439 100.0
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 1.0e-209 733.4 443 84.2
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 4.4e-205 718.0 443 82.6
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 5.2e-198 694.5 443 81.5
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 9.9e-197 690.3 441 80.0
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 7.1e-195 684.1 440 79.5
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 1.6e-194 682.9 441 80.3
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 2.7e-194 682.2 447 77.4
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 4.6e-194 681.4 441 78.0
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-192 676.8 439 80.4
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 3.8e-188 661.8 441 76.2
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 7.3e-184 647.5 445 75.3
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 7.6e-181 637.5 435 74.9
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-177 626.3 450 74.4
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.2e-141 507.3 451 59.9
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 6.5e-140 501.5 427 59.3
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 1.1e-139 500.7 442 59.3
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 7.2e-139 498.0 437 60.9
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 1.6e-138 496.9 350 68.3
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.7e-138 496.1 427 59.7
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 6.7e-137 491.5 429 59.0
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 4.4e-136 488.8 422 59.7
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 9.7e-136 487.6 427 58.3
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 8.2e-135 484.6 426 58.5
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 4.1e-134 482.3 429 58.0
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 4.1e-134 482.3 434 57.4
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 5.3e-134 481.9 426 58.9
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 5.9e-133 478.4 441 56.2
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 1.0e-132 477.6 442 57.7
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 5.0e-132 475.3 422 59.7
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 2.5e-131 473.0 426 58.7
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 3.2e-131 472.6 423 57.9
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 3.2e-131 472.6 436 59.2
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 3.2e-131 472.6 417 57.6
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 7.2e-131 471.5 422 58.5
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 9.4e-131 471.1 426 58.9
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 2.1e-130 469.9 429 55.9
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.7e-130 469.5 422 58.5
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.7e-130 469.5 427 59.7
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 1.0e-129 467.6 437 54.0
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 1.8e-129 466.8 438 56.6
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 2.3e-129 466.5 425 58.4
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 3.0e-129 466.1 428 53.7
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 1.1e-128 464.2 422 57.6
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.1e-128 464.2 421 55.6
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 1.1e-128 464.2 427 56.2
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 4.4e-128 462.2 429 54.5
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 4.4e-128 462.2 426 56.1
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 4.4e-128 462.2 425 56.2
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 5.7e-128 461.8 425 55.8
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 5.7e-128 461.8 425 55.8
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 5.7e-128 461.8 425 55.8
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 1.3e-127 460.7 424 56.1
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 1.3e-127 460.7 446 55.4
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 1.7e-127 460.3 436 56.2
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 2.2e-127 459.9 424 56.1
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 2.2e-127 459.9 425 55.5
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 2.8e-127 459.5 426 55.6
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 2.8e-127 459.5 420 56.4
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 3.7e-127 459.1 426 55.9
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 6.3e-127 458.4 432 54.6
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 8.2e-127 458.0 428 55.6
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 8.2e-127 458.0 429 56.2
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.4e-126 457.2 435 55.4
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 1.4e-126 457.2 421 58.2
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 2.4e-126 456.4 429 53.1
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.1e-126 456.1 435 55.4
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 4.1e-126 455.7 429 55.2
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 1.6e-125 453.8 427 53.9
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 2.0e-125 453.4 429 54.5
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.0e-125 453.4 442 53.2
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.0e-125 453.4 349 61.3
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 3.5e-125 452.6 439 53.1
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 5.9e-125 451.8 425 55.3
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 5.9e-125 451.8 430 55.3
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 7.7e-125 451.4 426 55.2
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 7.7e-125 451.4 420 54.5
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 1.0e-124 451.1 420 55.0
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.7e-124 450.3 344 62.8
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.7e-124 450.3 420 54.8
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 3.8e-124 449.1 427 55.5
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 5.0e-124 448.7 428 54.7
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 5.0e-124 448.7 428 54.7
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 5.0e-124 448.7 428 54.7
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 5.0e-124 448.7 353 61.5
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 5.0e-124 448.7 426 53.5
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 6.5e-124 448.4 438 53.2
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 6.5e-124 448.4 356 61.2
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 1.1e-123 447.6 429 55.0
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.1e-123 447.6 426 54.5
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 1.5e-123 447.2 429 55.0
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 1.5e-123 447.2 349 61.0
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.5e-123 446.4 394 56.1
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 3.2e-123 446.0 351 60.4
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.2e-123 446.0 428 55.6
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.2e-123 446.0 420 54.5
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 4.2e-123 445.7 345 60.0
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 9.4e-123 444.5 428 53.3
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 1.2e-122 444.1 430 53.3
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 2.1e-122 443.4 422 54.3
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 4.7e-122 442.2 422 54.0
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 8.0e-122 441.4 422 53.8
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 8.0e-122 441.4 436 51.1
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 1.0e-121 441.0 350 59.4
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.8e-121 440.3 353 60.6
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 1.8e-121 440.3 344 60.2
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 3.0e-121 439.5 427 53.2
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 4.0e-121 439.1 438 54.3
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 1.2e-120 437.6 426 55.9
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 1.2e-120 437.6 409 53.3
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 1.2e-120 437.6 431 53.4
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 2.0e-120 436.8 347 58.2
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 2.0e-120 436.8 423 54.8
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 5.7e-120 435.3 344 60.2
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 5.7e-120 435.3 344 60.5
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 9.7e-120 434.5 314 65.9
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 9.7e-120 434.5 350 58.3
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.2e-119 433.3 426 53.5
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 3.7e-119 432.6 348 60.3
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 3.1e-118 429.5 356 57.6
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 1.2e-117 427.6 422 51.4
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 2.0e-117 426.8 432 50.5
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 7.7e-117 424.9 352 58.8
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 2.9e-116 422.9 421 54.6
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.5e-115 420.6 350 58.9
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 7.2e-115 418.3 427 52.2
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 9.4e-115 417.9 320 63.1
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 2.1e-114 416.8 394 53.0
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 3.6e-114 416.0 452 49.8
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 8.8e-113 411.4 429 49.9
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 3.1e-110 402.9 335 57.0
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.2e-109 401.0 362 55.0
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 7.7e-109 398.3 458 50.4
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 1.5e-107 394.0 369 53.9
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.2e-104 384.4 340 52.6
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.0e-104 383.6 339 52.8
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 2.6e-104 383.3 291 60.1
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.4e-104 382.9 343 54.2
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 7.5e-104 381.7 458 46.5
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.4e-102 377.5 343 53.6
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 8.6e-100 368.2 251 68.9
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.0e-97 361.3 309 58.6
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 1.4e-94 350.9 339 49.9
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 1.3e-92 344.4 344 48.3
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 1.9e-91 340.5 439 46.0
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 5.6e-91 339.0 251 62.5
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 1.4e-89 334.3 385 44.4
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 4.0e-89 332.8 349 46.7
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 8.9e-89 331.6 339 48.7
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.6e-88 330.1 307 54.1
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 3.7e-87 326.2 344 46.8
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.3e-84 317.8 339 46.0
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 2.5e-83 313.5 241 61.8
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 4.7e-82 309.3 344 45.3
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.8e-81 307.4 348 44.8
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 1.6e-77 294.3 242 57.9
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.5e-75 287.7 279 56.3
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 3.6e-74 283.1 237 54.4
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 3.1e-73 280.0 386 41.5
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.4e-72 276.2 344 41.0
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.8e-72 275.8 340 41.8
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.9e-71 272.7 343 41.7
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.4e-70 271.2 348 40.8
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 2.1e-69 267.3 237 51.5
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 4.6e-69 266.2 299 45.2
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.7e-68 264.2 348 39.9
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.3e-66 258.1 344 41.3
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.8e-65 254.2 244 48.4
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.9e-63 246.1 351 37.6
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 7.9e-53 212.2 374 35.6
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 3.9e-36 156.8 150 53.3
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 2.5e-35 154.1 413 27.8
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 6.7e-28 129.4 156 46.2
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.5e-19 101.7 115 41.7
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.2e-14 83.6 119 37.8
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 5.5e-14 83.2 75 48.0
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.2e-13 82.0 123 48.8
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.6e-13 80.5 88 47.7
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.4e-12 78.6 101 36.6
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 9.7e-11 72.4 75 41.3
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.0e-07 62.4 36 80.6


User provided reference genes

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