Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3780 Papaver somniferum HOM05D003968 ORTHO05D004077 1.8e-84 316.2 206 100.0
PSO478G1150 Papaver somniferum HOM05D003968 ORTHO05D004077 1.7e-82 309.7 206 99.0
TAR629G0662 Trochodendron aralioides HOM05D003968 ORTHO05D004077 1.1e-36 157.5 195 55.4
GSVIVG01000957001 Vitis vinifera HOM05D003968 ORTHO05D004077 3.1e-36 156.0 207 56.0
Cfa009411 Carpinus fangiana HOM05D003968 ORTHO05D004077 5.0e-34 148.7 197 49.7
Haze_12469 Corylus avellana HOM05D003968 ORTHO05D004077 1.1e-33 147.5 197 48.7
Phvul.008G000400 Phaseolus vulgaris HOM05D003968 ORTHO05D004077 2.5e-33 146.4 211 44.1
CiPaw.06G107600 Carya illinoinensis HOM05D003968 ORTHO05D004077 1.6e-32 143.7 203 49.8
VMungo1383G2332 Vigna mungo HOM05D003968 ORTHO05D004077 2.1e-32 143.3 210 42.9
QL03p050330 Quercus lobata HOM05D003968 ORTHO05D004077 2.8e-32 142.9 200 43.0
arahy.Tifrunner.gnm1.ann1.25I2B1 Arachis hypogaea HOM05D003968 ORTHO05D004077 1.8e-31 140.2 219 48.9
arahy.Tifrunner.gnm1.ann1.GKU1A2 Arachis hypogaea HOM05D003968 ORTHO05D004077 1.8e-31 140.2 219 48.9
CSS0002178 Camellia sinensis var. sinensis HOM05D003968 ORTHO05D004077 1.2e-30 137.5 197 45.2
Nitab4.5_0007554g0020 Nicotiana tabacum HOM05D003968 ORTHO05D004077 1.5e-30 137.1 200 47.0
Eucgr.H03380 Eucalyptus grandis HOM05D003968 ORTHO05D004077 2.0e-30 136.7 210 49.0
Duzib251G0690 Durio zibethinus HOM05D003968 ORTHO05D004077 2.6e-30 136.3 201 57.7
Lalb_Chr04g0257091 Lupinus albus HOM05D003968 ORTHO05D004077 2.6e-30 136.3 215 58.1
Glyma.18G302000 Glycine max HOM05D003968 ORTHO05D004077 4.4e-30 135.6 211 52.1
Aqoxy5G03211 Aquilegia oxysepala HOM05D003968 ORTHO05D004077 5.7e-30 135.2 194 59.8
AL4G29180 Arabidopsis lyrata HOM05D003968 ORTHO05D004077 5.7e-30 135.2 194 59.3
CiPaw.05G103900 Carya illinoinensis HOM05D003968 ORTHO05D004077 7.5e-30 134.8 199 46.2
Nn3g16325 Nelumbo nucifera HOM05D003968 ORTHO05D004077 7.5e-30 134.8 208 45.2
Oeu003280.1 Olea europaea HOM05D003968 ORTHO05D004077 7.5e-30 134.8 203 41.4
Manes.08G103100 Manihot esculenta HOM05D003968 ORTHO05D004077 2.2e-29 133.3 209 48.3
Sc11g0000210 Simmondsia chinensis HOM05D003968 ORTHO05D004077 2.2e-29 133.3 218 42.2
TWI75G0242 Tripterygium wilfordii HOM05D003968 ORTHO05D004077 6.3e-29 131.7 213 46.9
Dinv17895 Davidia involucrata HOM05D003968 ORTHO05D004077 8.3e-29 131.3 199 58.8
Peaxi162Scf00128g01760 Petunia axillaris HOM05D003968 ORTHO05D004077 8.3e-29 131.3 203 43.8
CARHR127520 Cardamine hirsuta HOM05D003968 ORTHO05D004077 1.1e-28 131.0 196 58.7
Ciclev10032280m.g Citrus clementina HOM05D003968 ORTHO05D004077 1.1e-28 131.0 207 58.5
RcHm_v2.0_Chr4g0429341 Rosa chinensis HOM05D003968 ORTHO05D004077 1.4e-28 130.6 218 56.0
THA.LOC104820530 Tarenaya hassleriana HOM05D003968 ORTHO05D004077 1.4e-28 130.6 202 47.0
vmacro22632 Vaccinium macrocarpon HOM05D003968 ORTHO05D004077 1.8e-28 130.2 201 57.2
THA.LOC104814203 Tarenaya hassleriana HOM05D003968 ORTHO05D004077 2.4e-28 129.8 200 52.5
Duzib052G1223 Durio zibethinus HOM05D003968 ORTHO05D004077 5.4e-28 128.6 211 55.5
Duzib248G0844 Durio zibethinus HOM05D003968 ORTHO05D004077 5.4e-28 128.6 207 48.8
Nitab4.5_0001600g0080 Nicotiana tabacum HOM05D003968 ORTHO05D004077 5.4e-28 128.6 195 44.6
Actinidia30604 Actinidia chinensis HOM05D003968 ORTHO05D004077 7.0e-28 128.3 203 46.3
TWI18G0914 Tripterygium wilfordii HOM05D003968 ORTHO05D004077 7.0e-28 128.3 218 45.4
FAN12G2512 Fragaria x ananassa HOM05D003968 ORTHO05D004077 9.2e-28 127.9 221 53.8
Thhalv10017284m.g Eutrema salsugineum HOM05D003968 ORTHO05D004077 1.6e-27 127.1 194 59.8
Potri.003G165800 Populus trichocarpa HOM05D003968 ORTHO05D004077 2.7e-27 126.3 199 47.2
Carub.0004s1514 Capsella rubella HOM05D003968 ORTHO05D004077 3.5e-27 125.9 199 60.8
Manes.09G185900 Manihot esculenta HOM05D003968 ORTHO05D004077 3.5e-27 125.9 223 46.6
PGR057G0001 Punica granatum HOM05D003968 ORTHO05D004077 3.5e-27 125.9 201 52.2
PGR119G2322 Punica granatum HOM05D003968 ORTHO05D004077 3.5e-27 125.9 201 52.2
Sed0024018 Sechium edule HOM05D003968 ORTHO05D004077 3.5e-27 125.9 198 60.1
TWI36G1280 Tripterygium wilfordii HOM05D003968 ORTHO05D004077 3.5e-27 125.9 214 37.4
Potri.001G062000 Populus trichocarpa HOM05D003968 ORTHO05D004077 4.5e-27 125.6 212 45.8
AT2G33510 Arabidopsis thaliana HOM05D003968 ORTHO05D004077 5.9e-27 125.2 196 61.2
Nn4g22193 Nelumbo nucifera HOM05D003968 ORTHO05D004077 5.9e-27 125.2 203 43.8
Sabra03G0121000 Salix brachista HOM05D003968 ORTHO05D004077 5.9e-27 125.2 208 43.8
Ah.02g131150 Amaranthus hybridus HOM05D003968 ORTHO05D004077 1.0e-26 124.4 231 39.0
CDE06G0253 Ceratophyllum demersum HOM05D003968 ORTHO05D004077 1.0e-26 124.4 194 39.2
BcaB02g10569 Brassica carinata HOM05D003968 ORTHO05D004077 1.3e-26 124.0 198 60.1
Cpa.g.sc123.52 Carica papaya HOM05D003968 ORTHO05D004077 1.3e-26 124.0 151 53.0
MBI07_g37482_MAGBIO Magnolia biondii HOM05D003968 ORTHO05D004077 1.3e-26 124.0 194 50.0
CDE02G3264 Ceratophyllum demersum HOM05D003278 ORTHO05D003738 1.7e-26 123.6 194 39.2
Lj1g0012774 Lotus japonicus HOM05D003968 ORTHO05D004077 1.7e-26 123.6 210 42.4
MSTRG.8041 Avicennia marina HOM05D003968 ORTHO05D004077 2.3e-26 123.2 207 46.9
Gohir.D12G145000 Gossypium hirsutum HOM05D003968 ORTHO05D004077 2.3e-26 123.2 199 56.3
BcaC01g05837 Brassica carinata HOM05D003968 ORTHO05D004077 2.9e-26 122.9 198 55.1
C03p21930 Brassica napus HOM05D003968 ORTHO05D004077 2.9e-26 122.9 198 55.1
A03p18770 Brassica napus HOM05D003968 ORTHO05D004077 3.8e-26 122.5 198 55.1
C04p63030 Brassica napus HOM05D003968 ORTHO05D004077 3.8e-26 122.5 199 56.3
Gohir.A12G140400 Gossypium hirsutum HOM05D003968 ORTHO05D004077 3.8e-26 122.5 199 58.3
Gorai.008G156400 Gossypium raimondii HOM05D003968 ORTHO05D004077 3.8e-26 122.5 199 58.3
Peaxi162Scf00758g00054 Petunia axillaris HOM05D003968 ORTHO05D004077 3.8e-26 122.5 197 59.9
BraA03t11137Z Brassica rapa HOM05D003968 ORTHO05D004077 5.0e-26 122.1 198 55.6
FvH4_4g23070 Fragaria vesca HOM05D003968 ORTHO05D004077 6.6e-26 121.7 226 54.4
BcaC02g07799 Brassica carinata HOM05D003968 ORTHO05D004077 8.6e-26 121.3 199 54.8
CSS0048086 Camellia sinensis var. sinensis HOM05D003968 ORTHO05D004077 8.6e-26 121.3 203 55.7
ECA233G5077 Erigeron canadensis HOM05D003968 ORTHO05D004077 8.6e-26 121.3 206 58.3
Prupe.1G219000 Prunus persica HOM05D003968 ORTHO05D004077 8.6e-26 121.3 223 45.3
Aa31sc415G10 Aethionema arabicum HOM05D003968 ORTHO05D004077 1.9e-25 120.2 194 54.1
A05p12030 Brassica napus HOM05D003968 ORTHO05D004077 1.9e-25 120.2 198 59.6
Lalb_Chr14g0375131 Lupinus albus HOM05D003968 ORTHO05D004077 1.9e-25 120.2 201 56.7
MD13G1126400 Malus domestica HOM05D003968 ORTHO05D004077 2.5e-25 119.8 215 54.4
BcaB06g28694 Brassica carinata HOM05D003968 ORTHO05D004077 4.3e-25 119.0 189 52.9
ATR0582G076 Amborella trichopoda HOM05D003968 ORTHO05D004077 5.6e-25 118.6 192 43.2
BcaC02g11436 Brassica carinata HOM05D003968 ORTHO05D004077 7.3e-25 118.2 199 59.3
C04p15610 Brassica napus HOM05D003968 ORTHO05D004077 7.3e-25 118.2 199 59.3
CSS0023603 Camellia sinensis var. sinensis HOM05D003968 ORTHO05D004077 7.3e-25 118.2 216 38.4
ClCG07G011730 Citrullus lanatus HOM05D003968 ORTHO05D004077 7.3e-25 118.2 197 57.4
COL.COLO4_11740 Corchorus olitorius HOM05D003968 ORTHO05D004077 7.3e-25 118.2 209 48.3
Atru.chr11.2403 Acer truncatum HOM05D003968 ORTHO05D004077 9.5e-25 117.9 216 50.0
A04p25820 Brassica napus HOM05D003968 ORTHO05D004077 9.5e-25 117.9 184 58.7
BraA04t18084Z Brassica rapa HOM05D003968 ORTHO05D004077 1.2e-24 117.5 208 54.3
Sp4g15850 Schrenkiella parvula HOM05D003968 ORTHO05D004077 1.2e-24 117.5 152 62.5
Sabra01G0044600 Salix brachista HOM05D003968 ORTHO05D004077 1.6e-24 117.1 203 44.3
Solyc01g009770.3 Solanum lycopersicum HOM05D003968 ORTHO05D004077 1.6e-24 117.1 215 41.9
BcaB01g03931 Brassica carinata HOM05D003968 ORTHO05D004077 2.1e-24 116.7 197 53.3
FAN17G1317 Fragaria x ananassa HOM05D003968 ORTHO05D004077 2.8e-24 116.3 251 49.0
Psat0s2399g0040 Pisum sativum HOM05D003968 ORTHO05D004077 3.6e-24 115.9 148 47.3
SalBow2G1659 Salvia bowleyana HOM05D003968 ORTHO05D004077 4.7e-24 115.5 208 44.7
unitig_747.g21116 Utricularia gibba HOM05D003968 ORTHO05D004077 4.7e-24 115.5 198 36.9
MSTRG.468 Avicennia marina HOM05D003968 ORTHO05D004077 6.1e-24 115.2 204 46.1
Migut.K01036 Erythranthe guttata HOM05D003968 ORTHO05D004077 6.1e-24 115.2 206 46.6
MD16G1126900 Malus domestica HOM05D003968 ORTHO05D004077 6.1e-24 115.2 221 51.6
CANSAT56G0023 Cannabis sativa HOM05D003968 ORTHO05D004077 8.0e-24 114.8 221 49.8
Medtr7g005500 Medicago truncatula HOM05D003968 ORTHO05D004077 8.0e-24 114.8 213 46.0
Thecc.02G196200 Theobroma cacao HOM05D003968 ORTHO05D004077 1.0e-23 114.4 209 53.1
Aa31LG9G13440 Aethionema arabicum HOM05D003968 ORTHO05D004077 2.3e-23 113.2 186 51.6
BolC4t27780H Brassica oleracea HOM05D003968 ORTHO05D004077 2.3e-23 113.2 212 52.8
Hma1.2p1_0459F.1_g157230 Hydrangea macrophylla HOM05D003968 ORTHO05D004077 2.3e-23 113.2 205 54.1
HanXRQChr12g0362341 Helianthus annuus HOM05D003968 ORTHO05D004077 3.0e-23 112.8 201 51.2
Lsat_1_v5_gn_8_147160 Lactuca sativa HOM05D003968 ORTHO05D004077 3.0e-23 112.8 243 49.0
MBI11_g37080_MAGBIO Magnolia biondii HOM05D003968 ORTHO05D004077 3.0e-23 112.8 162 51.2
Lj6C835T0 Lonicera japonica HOM05D003968 ORTHO05D004077 4.0e-23 112.5 198 44.4
unitig_749.g13321 Utricularia gibba HOM05D003968 ORTHO05D004077 4.0e-23 112.5 192 37.5
AT1G28070 Arabidopsis thaliana HOM05D003968 ORTHO05D004077 5.2e-23 112.1 194 55.2
Carub.0001s2650 Capsella rubella HOM05D003968 ORTHO05D004077 5.2e-23 112.1 192 54.2
THA.LOC104812600 Tarenaya hassleriana HOM05D003968 ORTHO05D004077 5.2e-23 112.1 204 50.5
BraA08t34544Z Brassica rapa HOM05D003968 ORTHO05D004077 6.8e-23 111.7 197 48.2
Cc11_g17440 Coffea canephora HOM05D003968 ORTHO05D004077 6.8e-23 111.7 224 50.4
HanXRQChr08g0210131 Helianthus annuus HOM05D003968 ORTHO05D004077 6.8e-23 111.7 204 52.5
Sopen01g005310 Solanum pennellii HOM05D003968 ORTHO05D004077 6.8e-23 111.7 218 39.9
unitig_26.g10423 Utricularia gibba HOM05D003968 ORTHO05D004077 6.8e-23 111.7 173 38.2
Actinidia22131 Actinidia chinensis HOM05D003968 ORTHO05D004077 2.0e-22 110.2 197 57.9
Ah.03g135740 Amaranthus hybridus HOM05D003968 ORTHO05D004077 3.4e-22 109.4 229 43.2
BraA05t20145Z Brassica rapa HOM05D003968 ORTHO05D004077 3.4e-22 109.4 211 53.1
A07p11490 Brassica napus HOM05D003968 ORTHO05D004077 4.4e-22 109.0 187 38.5
BraA07t28938Z Brassica rapa HOM05D003968 ORTHO05D004077 4.4e-22 109.0 187 38.5
Thhalv10008849m.g Eutrema salsugineum HOM05D003968 ORTHO05D004077 5.8e-22 108.6 196 52.0
Lsat_1_v5_gn_4_1260 Lactuca sativa HOM05D003968 ORTHO05D004077 5.8e-22 108.6 200 54.5
Sp1g24250 Schrenkiella parvula HOM05D003968 ORTHO05D004077 9.8e-22 107.8 196 52.6
CAN.G1277.6 Capsicum annuum HOM05D003968 ORTHO05D004077 1.7e-21 107.1 197 42.6
TPR.G15634 Trifolium pratense HOM05D003968 ORTHO05D004077 2.2e-21 106.7 204 55.9
CsaV3_4G002470 Cucumis sativus L. HOM05D003968 ORTHO05D004077 2.9e-21 106.3 160 64.4
PGSC0003DMG400030000 Solanum tuberosum HOM05D003968 ORTHO05D004077 2.9e-21 106.3 212 37.7
BcaB03g13960 Brassica carinata HOM05D003968 ORTHO05D004077 4.9e-21 105.5 196 36.7
PSO229G0040 Papaver somniferum HOM05D003968 ORTHO05D004077 4.9e-21 105.5 191 40.3
MELO3C017796.2 Cucumis melo HOM05D003968 ORTHO05D004077 6.4e-21 105.1 166 65.1
PSO675G4434 Papaver somniferum HOM05D003968 ORTHO05D004077 6.4e-21 105.1 193 42.5
MELO3C022347.2 Cucumis melo HOM05D003968 ORTHO05D004077 8.3e-21 104.8 217 42.4
CARHR027520 Cardamine hirsuta HOM05D003968 ORTHO05D004077 1.1e-20 104.4 196 49.5
BolC4t23129H Brassica oleracea HOM05D003968 ORTHO05D004077 1.4e-20 104.0 212 54.7
A08p25930 Brassica napus HOM05D003968 ORTHO05D004077 2.4e-20 103.2 195 46.2
CsaV3_6G007850 Cucumis sativus L. HOM05D003968 ORTHO05D004077 3.2e-20 102.8 217 44.2
ClCG06G001810 Citrullus lanatus HOM05D003968 ORTHO05D004077 4.1e-20 102.4 220 45.9
BolC3t19720H Brassica oleracea HOM05D003968 ORTHO05D004077 5.4e-20 102.1 197 46.2
FAN07G1723 Fragaria x ananassa HOM05D003968 ORTHO05D004077 1.2e-19 100.9 245 46.1
Hund25497 Selenicereus undatus HOM05D003968 ORTHO05D004077 3.5e-19 99.4 217 39.6
DCAR_024638 Daucus carota HOM05D003968 ORTHO05D004077 4.6e-19 99.0 234 36.3
Sed0012192 Sechium edule HOM05D003968 ORTHO05D004077 4.6e-19 99.0 216 49.1
TAR622G0782 Trochodendron aralioides HOM05D003968 ORTHO05D004077 1.7e-18 97.1 197 38.1
BcaC01g00004 Brassica carinata HOM05D003968 ORTHO05D004077 3.0e-18 96.3 197 44.7
C03p74720 Brassica napus HOM05D003968 ORTHO05D004077 3.0e-18 96.3 196 46.4
BcaC06g35328 Brassica carinata HOM05D003968 ORTHO05D004077 3.9e-18 95.9 191 36.1
C07p17340 Brassica napus HOM05D003968 ORTHO05D004077 3.9e-18 95.9 191 36.1
BolC7t42238H Brassica oleracea HOM05D003968 ORTHO05D004077 3.9e-18 95.9 191 36.1
HPP92_023087 Vanilla planifolia HOM05D003968 ORTHO05D004077 6.2e-16 88.6 169 37.3
BcaC05g26810 Brassica carinata HOM05D003968 ORTHO05D004077 1.8e-15 87.0 163 35.6
SGA_v2.0_scaffold80G25944 Striga asiatica HOM05D003968 ORTHO05D004077 3.1e-15 86.3 99 48.5
Rhsim12G0020700 Rhododendron simsii HOM05D003968 ORTHO05D004077 6.8e-15 85.1 140 40.0
Oeu019428.1 Olea europaea HOM05D003968 ORTHO05D004077 4.9e-13 79.0 204 29.9
A09p38020 Brassica napus HOM05D003968 ORTHO05D004077 5.4e-12 75.5 159 49.1
BraA09t39312Z Brassica rapa HOM05D003968 ORTHO05D004077 5.4e-12 75.5 159 49.1
BcaC05g26624 Brassica carinata HOM05D003968 ORTHO05D004077 1.6e-11 73.9 159 49.1
C05p26740 Brassica napus HOM05D003968 ORTHO05D004077 1.6e-11 73.9 159 49.1
HPP92_011550 Vanilla planifolia HOM05D003968 ORTHO05D004077 1.6e-11 73.9 154 37.7
MBI01_g34379_MAGBIO Magnolia biondii HOM05D003968 ORTHO05D004077 2.0e-11 73.6 135 43.0
CSS0031909 Camellia sinensis var. sinensis HOM05D003968 ORTHO05D004077 7.8e-11 71.6 233 30.5
Gohir.A01G021200 Gossypium hirsutum HOM05D003968 ORTHO05D004077 3.9e-10 69.3 207 44.4
Gohir.D01G019600 Gossypium hirsutum HOM05D003968 ORTHO05D004077 5.0e-10 68.9 207 45.4
Gorai.002G022000 Gossypium raimondii HOM05D003968 ORTHO05D004077 6.6e-10 68.6 207 46.4
Os02g0516400 Oryza sativa ssp. japonica HOM05D003968 ORTHO05D004077 3.3e-09 66.2 41 61.0
HPP92_006446 Vanilla planifolia HOM05D003968 ORTHO05D004077 4.7e-08 62.4 171 31.0
SEGI_36735 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 6.2e-08 62.0 150 29.3
CDE09G1092 Ceratophyllum demersum HOM05D003968 ORTHO05D004077 3.1e-07 59.7 155 24.5
CDE02G1122 Ceratophyllum demersum HOM05D003968 ORTHO05D004077 4.0e-07 59.3 158 25.3
AL1G41580 Arabidopsis lyrata HOM05D003968 ORTHO05D004077 6.8e-07 58.5 34 67.6
BcaC05g26622 Brassica carinata HOM05D003968 ORTHO05D004077 6.8e-07 58.5 35 62.9
BolC5t31398H Brassica oleracea HOM05D003968 ORTHO05D004077 8.9e-07 58.2 151 47.0
Pp3c16_12300 Physcomitrium patens HOM05D013579 ORTHO05D001508 8.9e-07 58.2 60 48.3
Pp3c27_4970 Physcomitrium patens HOM05D013579 ORTHO05D004077 2.6e-06 56.6 48 52.1
SEGI_14851 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 2.6e-06 56.6 49 51.0
Pp3c14_14200 Physcomitrium patens HOM05D022619 ORTHO05D026045 3.4e-06 56.2 59 44.1
Pp3c17_5610 Physcomitrium patens HOM05D022619 ORTHO05D026045 5.8e-06 55.5 59 44.1
SEGI_09126 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 9.9e-06 54.7 49 49.0


User provided reference genes

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