Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 1.0e-200 703.4 394 100.0
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 2.0e-180 636.0 394 90.6
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 1.7e-179 632.9 394 91.1
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 2.5e-106 389.8 398 58.0
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.6e-100 370.5 393 56.0
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 1.6e-100 370.5 392 56.9
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 2.0e-100 370.2 395 55.7
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 1.3e-99 367.5 393 53.9
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 2.9e-99 366.3 392 54.8
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 3.8e-99 365.9 394 55.8
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 6.5e-99 365.2 392 54.6
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 6.5e-99 365.2 392 54.6
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 6.5e-99 365.2 399 53.9
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 2.5e-98 363.2 397 53.9
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 3.2e-98 362.8 395 54.2
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 5.5e-98 362.1 398 55.5
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 5.5e-98 362.1 392 54.3
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 7.2e-98 361.7 416 52.6
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 7.2e-98 361.7 393 55.2
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 1.6e-97 360.5 393 55.7
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 1.6e-97 360.5 393 56.2
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 4.7e-97 359.0 394 54.1
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 6.1e-97 358.6 396 54.5
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 6.1e-97 358.6 396 53.8
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 1.4e-96 357.5 393 53.7
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 1.4e-96 357.5 393 54.7
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 8.8e-96 354.8 380 54.2
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 1.5e-95 354.0 394 52.0
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 2.0e-95 353.6 397 56.2
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 2.6e-95 353.2 400 53.5
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 2.6e-95 353.2 405 51.9
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 3.3e-95 352.8 394 51.5
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 4.4e-95 352.4 406 51.7
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 7.5e-95 351.7 398 51.8
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 7.5e-95 351.7 392 51.8
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 2.2e-94 350.1 392 53.6
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 2.2e-94 350.1 431 49.7
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 2.8e-94 349.7 391 53.5
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 6.3e-94 348.6 393 52.7
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 8.2e-94 348.2 392 53.8
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 8.2e-94 348.2 391 53.2
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 1.1e-93 347.8 397 52.6
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 2.4e-93 346.7 392 55.9
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 1.6e-92 344.0 391 52.2
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 2.0e-92 343.6 397 52.1
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 2.0e-92 343.6 398 54.0
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 2.0e-92 343.6 397 53.4
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 3.5e-92 342.8 395 51.6
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 3.5e-92 342.8 394 53.0
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 5.9e-92 342.0 418 51.9
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 7.7e-92 341.7 417 53.0
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 1.0e-91 341.3 393 52.9
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 1.7e-91 340.5 393 53.2
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 2.9e-91 339.7 391 51.7
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 5.0e-91 339.0 392 52.0
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 5.0e-91 339.0 406 53.2
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 8.5e-91 338.2 392 52.0
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 8.5e-91 338.2 413 51.6
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 1.5e-90 337.4 392 50.8
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 1.5e-90 337.4 391 51.7
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 1.5e-90 337.4 402 52.7
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 1.9e-90 337.0 395 51.1
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 3.2e-90 336.3 394 50.8
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 4.2e-90 335.9 394 49.7
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 9.4e-90 334.7 391 53.2
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 9.4e-90 334.7 395 49.9
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 1.6e-89 334.0 391 50.1
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 2.7e-89 333.2 395 55.9
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 4.7e-89 332.4 397 51.9
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 6.1e-89 332.0 392 51.8
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 6.1e-89 332.0 396 55.3
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 1.4e-88 330.9 402 52.0
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 2.3e-88 330.1 397 50.4
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 3.0e-88 329.7 395 54.4
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 5.2e-88 328.9 393 50.9
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.5e-87 327.4 394 52.3
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 2.6e-87 326.6 393 52.2
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 4.4e-87 325.9 403 54.1
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 2.8e-86 323.2 407 53.6
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 3.7e-86 322.8 393 50.6
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 8.3e-86 321.6 416 52.4
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 8.3e-86 321.6 397 50.4
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 1.4e-85 320.9 395 49.9
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 2.4e-85 320.1 386 50.0
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 2.4e-85 320.1 404 54.2
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 2.4e-85 320.1 401 51.6
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 5.4e-85 318.9 399 53.9
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 5.4e-85 318.9 393 48.9
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 1.2e-84 317.8 409 53.5
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 2.0e-84 317.0 411 52.6
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 5.9e-84 315.5 414 51.9
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 7.7e-84 315.1 396 50.0
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 7.7e-84 315.1 419 51.6
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 5.5e-82 308.9 412 52.4
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 7.2e-82 308.5 410 52.4
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 2.1e-81 307.0 417 51.6
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 1.0e-80 304.7 417 51.6
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 4.0e-80 302.8 389 48.1
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 8.9e-80 301.6 415 51.8
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 8.9e-80 301.6 391 49.9
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 1.5e-79 300.8 406 47.8
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 1.5e-79 300.8 391 48.3
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 5.7e-79 298.9 423 51.1
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 5.7e-79 298.9 439 44.0
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 5.7e-79 298.9 422 48.1
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 8.3e-78 295.0 393 49.1
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 1.8e-77 293.9 418 50.2
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 3.8e-75 286.2 378 51.6
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 5.2e-72 275.8 392 45.7
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 2.0e-71 273.9 337 51.6
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 1.3e-67 261.2 348 48.0
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 6.4e-54 215.7 281 48.8
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 3.2e-53 213.4 486 36.2
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 2.4e-48 197.2 422 38.6
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 6.4e-46 189.1 384 36.5
BcaC04g22519 Brassica carinata HOM05D005438 ORTHO05D006744 3.1e-40 170.2 280 44.6
CSS0040427 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 6.9e-40 169.1 150 62.0
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 1.2e-39 168.3 541 29.8
Lsat_1_v5_gn_1_49360 Lactuca sativa HOM05D005438 ORTHO05D006744 3.8e-38 163.3 219 47.5
Lsat_1_v5_gn_5_103140 Lactuca sativa HOM05D005438 ORTHO05D006744 3.8e-38 163.3 219 47.5
Lsat_1_v5_gn_9_38321 Lactuca sativa HOM05D005438 ORTHO05D006744 3.8e-38 163.3 219 47.5
SHI31900 Sapria himalayana HOM05D005438 ORTHO05D006744 4.6e-36 156.4 299 37.5
CDE12G0222 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 1.9e-34 151.0 151 56.3
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 9.0e-32 142.1 411 32.4
Cpa.g.sc631.4 Carica papaya HOM05D005438 ORTHO05D006744 5.8e-31 139.4 151 55.6
Actinidia28345 Actinidia chinensis HOM05D005438 ORTHO05D006744 7.9e-28 129.0 391 31.7
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 4.0e-24 116.7 315 34.9
BcaNung05361 Brassica carinata HOM05D005438 ORTHO05D006744 1.2e-23 115.2 195 48.2
Cpa.g.c39085 Carica papaya HOM05D005438 ORTHO05D006744 1.6e-20 104.8 185 39.5
Cre07.g347300 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D021338 1.1e-18 98.6 379 30.6
Cre07.g347400 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 1.1e-18 98.6 379 30.6
ATR0661G444 Amborella trichopoda HOM05D005438 ORTHO05D006744 3.4e-15 87.0 183 36.1
HanXRQChr16g0521071 Helianthus annuus HOM05D005438 ORTHO05D006744 3.9e-11 73.6 45 75.6
Cre01.g054000 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 1.0e-06 58.9 78 41.0
ECA246G3112 Erigeron canadensis HOM05D005438 ORTHO05D006744 1.3e-06 58.5 94 41.5


User provided reference genes

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