Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 8.5e-199 696.8 354 100.0
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 1.7e-194 682.6 354 97.5
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 4.9e-130 468.4 357 68.9
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 2.7e-128 462.6 361 64.8
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 6.2e-125 451.4 356 62.1
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.3e-122 443.7 357 60.2
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 1.7e-122 443.4 355 60.6
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 2.4e-121 439.5 357 60.2
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 3.2e-121 439.1 354 61.3
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 5.4e-121 438.3 358 61.7
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 5.4e-121 438.3 354 61.9
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 7.1e-121 438.0 356 61.5
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 9.3e-121 437.6 358 61.7
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.2e-120 437.2 358 61.7
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 1.6e-120 436.8 358 60.1
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 4.6e-120 435.3 354 61.0
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 6.0e-120 434.9 356 61.0
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 1.0e-119 434.1 356 59.6
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 1.0e-119 434.1 356 59.6
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 1.8e-119 433.3 355 57.7
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 5.1e-119 431.8 354 60.7
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 1.1e-118 430.6 359 59.9
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 1.5e-118 430.3 354 59.3
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 2.5e-118 429.5 354 60.2
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 4.3e-118 428.7 355 60.0
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 4.3e-118 428.7 354 60.5
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 7.4e-118 427.9 354 61.3
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 9.6e-118 427.6 355 61.1
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 9.6e-118 427.6 354 59.9
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 2.1e-117 426.4 354 59.9
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 1.1e-116 424.1 357 59.4
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 1.8e-116 423.3 355 60.6
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 2.4e-116 422.9 354 60.2
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 5.8e-115 418.3 359 59.3
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 7.6e-115 417.9 357 59.1
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 9.9e-115 417.5 355 59.2
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 1.7e-114 416.8 354 57.6
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 2.9e-114 416.0 354 59.9
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.8e-114 415.6 356 59.6
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 1.4e-113 413.7 352 59.4
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 2.4e-113 412.9 357 58.3
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 2.4e-113 412.9 355 58.9
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 2.4e-113 412.9 356 59.8
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 3.2e-113 412.5 357 56.9
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 9.3e-113 411.0 355 58.0
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 9.3e-113 411.0 332 62.3
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 9.3e-113 411.0 353 58.1
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 1.6e-112 410.2 356 58.1
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 1.6e-112 410.2 357 58.5
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 2.1e-112 409.8 357 58.0
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 2.7e-112 409.5 356 58.1
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 4.6e-112 408.7 355 57.5
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 6.0e-112 408.3 356 57.3
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 7.9e-112 407.9 356 57.9
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 1.8e-111 406.8 339 59.6
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 2.5e-110 402.9 355 56.6
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 4.3e-110 402.1 332 60.5
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.8e-109 398.7 358 58.7
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 6.2e-109 398.3 360 56.1
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 1.4e-108 397.1 358 56.7
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 1.4e-108 397.1 356 57.0
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 1.8e-108 396.7 356 56.7
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 2.4e-108 396.4 354 58.5
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 2.4e-108 396.4 355 57.2
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 4.0e-108 395.6 358 57.0
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 4.0e-108 395.6 357 54.9
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 1.5e-107 393.7 355 55.5
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 2.0e-107 393.3 358 55.9
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 5.8e-107 391.7 358 57.0
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 5.8e-107 391.7 356 55.6
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 1.0e-106 391.0 360 55.0
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 3.8e-106 389.0 354 55.6
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 8.4e-106 387.9 356 55.1
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 3.2e-105 386.0 358 55.3
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 1.2e-104 384.0 333 57.7
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 3.5e-104 382.5 357 56.0
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 6.0e-104 381.7 397 51.6
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.3e-101 374.0 295 63.7
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 1.1e-100 370.9 354 53.7
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 2.0e-99 366.7 377 51.5
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 1.3e-98 364.0 356 52.0
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 3.8e-98 362.5 331 55.9
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 5.0e-98 362.1 359 53.2
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 1.1e-97 360.9 358 53.4
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 4.2e-97 359.0 352 53.1
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 1.0e-95 354.4 315 56.5
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 3.9e-95 352.4 295 60.3
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 3.4e-91 339.3 329 52.9
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 3.8e-90 335.9 329 53.2
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 1.0e-87 327.8 357 48.2
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 5.1e-87 325.5 296 56.1
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 8.5e-82 308.1 355 45.6
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 8.8e-79 298.1 313 50.5
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 8.8e-79 298.1 313 50.5
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 1.2e-75 287.7 343 43.7
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 2.6e-75 286.6 355 42.0
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 8.5e-74 281.6 313 47.0
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 3.8e-66 256.1 212 60.4
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 8.5e-66 255.0 359 40.4
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 2.5e-65 253.4 212 59.9
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 9.1e-60 235.0 189 63.5
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 7.8e-51 205.3 173 59.0
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.3e-45 188.0 164 59.1
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 3.6e-40 169.9 148 58.8
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 3.6e-40 169.9 150 58.7
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 4.9e-37 159.5 154 48.7
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 4.1e-36 156.4 146 52.1
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 3.7e-29 133.3 119 57.1
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.2e-24 118.2 123 55.3
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.6e-24 116.7 76 75.0
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.8e-23 114.4 96 57.3
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 1.1e-20 105.1 105 50.5
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 5.4e-20 102.8 92 59.8
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 7.8e-11 72.4 47 72.3


User provided reference genes

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