Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 4.9e-146 521.2 274 100.0
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 9.6e-142 506.9 274 96.7
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 8.0e-88 327.8 266 70.7
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 8.9e-87 324.3 274 67.5
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 5.7e-86 321.6 276 67.4
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 9.8e-86 320.9 279 66.7
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.7e-85 320.1 247 71.7
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 3.7e-85 318.9 281 65.8
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 1.4e-84 317.0 241 72.2
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 3.2e-84 315.8 252 69.8
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 3.2e-84 315.8 245 70.6
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 4.1e-84 315.5 287 63.1
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 5.4e-84 315.1 190 84.7
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 1.2e-83 313.9 189 83.6
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 1.2e-83 313.9 252 69.0
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.2e-83 313.9 190 84.2
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.6e-83 313.5 249 70.7
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 3.5e-83 312.4 280 66.8
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 5.9e-83 311.6 287 65.2
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 5.9e-83 311.6 189 83.6
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 7.8e-83 311.2 271 64.9
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 7.8e-83 311.2 222 73.9
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 1.0e-82 310.8 283 63.6
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 2.3e-82 309.7 266 65.8
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 2.3e-82 309.7 273 65.9
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 3.0e-82 309.3 250 67.2
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 3.9e-82 308.9 190 83.7
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 3.9e-82 308.9 194 79.9
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 5.0e-82 308.5 280 63.9
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 8.6e-82 307.8 249 68.7
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 8.6e-82 307.8 189 83.1
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 1.9e-81 306.6 283 67.1
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 3.3e-81 305.8 238 69.3
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 3.3e-81 305.8 281 63.3
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 4.3e-81 305.4 269 63.9
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 4.3e-81 305.4 190 81.6
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 4.3e-81 305.4 190 81.6
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 4.3e-81 305.4 280 61.8
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 5.6e-81 305.1 287 61.3
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 5.6e-81 305.1 273 64.8
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 7.3e-81 304.7 241 69.3
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 9.5e-81 304.3 209 76.1
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 9.5e-81 304.3 195 81.0
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 9.5e-81 304.3 190 81.6
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 9.5e-81 304.3 190 81.1
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 1.2e-80 303.9 188 81.9
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 1.2e-80 303.9 267 64.0
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 1.2e-80 303.9 282 62.4
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 2.1e-80 303.1 272 65.4
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 2.1e-80 303.1 255 66.3
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 2.8e-80 302.8 272 63.2
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 2.8e-80 302.8 282 62.4
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 3.6e-80 302.4 214 74.8
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 3.6e-80 302.4 190 81.6
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 3.6e-80 302.4 188 80.3
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 4.7e-80 302.0 267 63.7
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 4.7e-80 302.0 274 66.1
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 4.7e-80 302.0 268 64.2
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 4.7e-80 302.0 268 63.1
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 6.2e-80 301.6 267 63.7
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 6.2e-80 301.6 267 63.7
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 8.0e-80 301.2 189 78.8
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 1.1e-79 300.8 192 82.3
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 1.4e-79 300.4 267 62.9
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 1.8e-79 300.1 187 81.3
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 2.3e-79 299.7 193 80.8
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 2.3e-79 299.7 196 80.1
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 3.1e-79 299.3 266 63.2
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 6.8e-79 298.1 280 63.6
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 6.8e-79 298.1 198 77.3
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 1.2e-78 297.4 268 64.9
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 1.2e-78 297.4 282 62.4
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 1.5e-78 297.0 274 61.7
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.5e-78 297.0 280 63.6
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 2.0e-78 296.6 276 62.3
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 2.0e-78 296.6 289 59.5
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 2.6e-78 296.2 189 80.4
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 4.4e-78 295.4 266 64.7
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 5.8e-78 295.0 229 69.4
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 5.8e-78 295.0 280 63.2
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 5.8e-78 295.0 196 78.1
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 7.5e-78 294.7 193 79.3
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 7.5e-78 294.7 192 80.2
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 1.7e-77 293.5 256 64.1
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 3.7e-77 292.4 266 61.3
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 1.1e-76 290.8 263 61.2
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.1e-76 290.8 196 77.6
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 1.1e-76 290.8 256 63.7
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 1.1e-76 290.8 257 64.6
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 4.1e-76 288.9 184 79.9
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 7.0e-76 288.1 210 74.8
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 7.0e-76 288.1 199 76.9
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 3.5e-75 285.8 192 77.1
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 1.5e-73 280.4 248 60.1
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 1.5e-73 280.4 202 72.8
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 1.9e-73 280.0 193 73.6
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 1.9e-73 280.0 225 66.2
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 2.8e-72 276.2 214 68.7
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 1.4e-68 263.8 190 74.7
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 1.3e-66 257.3 208 63.9
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 2.5e-65 253.1 195 65.1
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 4.0e-63 245.7 207 67.1
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 1.5e-62 243.8 284 54.6
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 3.8e-61 239.2 156 79.5
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 5.4e-60 235.3 195 61.0
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 9.2e-60 234.6 210 58.1
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 3.2e-52 209.5 247 52.2
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 7.3e-49 198.4 206 58.7
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 4.8e-48 195.7 218 58.3
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 3.4e-46 189.5 196 57.1
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 5.8e-46 188.7 181 58.6
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 3.2e-44 183.0 185 48.6
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 1.8e-42 177.2 109 79.8
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 1.8e-42 177.2 203 45.8
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 3.0e-42 176.4 128 69.5
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 5.3e-39 165.6 109 71.6
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 4.3e-33 146.0 254 37.8
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 3.0e-26 123.2 147 54.4
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 2.0e-22 110.5 97 62.9
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 1.0e-13 81.6 72 63.9
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 4.7e-11 72.8 48 70.8
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 1.8e-10 70.9 133 43.6
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 3.9e-10 69.7 44 79.5
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 2.0e-06 57.4 43 58.1
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 5.9e-06 55.8 105 42.9


User provided reference genes

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