Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3437 Papaver somniferum HOM05D005042 ORTHO05D006080 5.7e-295 1016.9 545 100.0
PSO478G2238 Papaver somniferum HOM05D005042 ORTHO05D006080 1.1e-234 816.6 555 83.8
Manes.01G025000 Manihot esculenta HOM05D005042 ORTHO05D006080 9.4e-56 222.2 664 32.7
TAR726G0003 Trochodendron aralioides HOM05D005042 ORTHO05D006080 6.1e-55 219.5 704 33.0
Rhsim12G0071400 Rhododendron simsii HOM05D005042 ORTHO05D006080 5.7e-53 213.0 595 33.8
CiPaw.06G094600 Carya illinoinensis HOM05D005042 ORTHO05D006080 4.8e-52 209.9 678 32.3
Potri.008G109100 Populus trichocarpa HOM05D005042 ORTHO05D006080 9.1e-51 205.7 681 30.8
Potri.T155180 Populus trichocarpa HOM05D005042 ORTHO05D006080 9.1e-51 205.7 681 30.8
TAR371G1247 Trochodendron aralioides HOM05D005042 ORTHO05D006080 9.5e-48 195.7 162 65.4
Potri.010G139100 Populus trichocarpa HOM05D005042 ORTHO05D006080 1.2e-47 195.3 721 30.7
Haze_11871 Corylus avellana HOM05D005042 ORTHO05D006080 1.6e-47 194.9 728 30.1
CANSAT11G1456 Cannabis sativa HOM05D005042 ORTHO05D006080 2.1e-47 194.5 169 60.9
Hund25158 Selenicereus undatus HOM05D005042 ORTHO05D006080 2.1e-47 194.5 576 31.9
vmacro01299 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 2.1e-47 194.5 603 32.2
Cfa008851 Carpinus fangiana HOM05D005042 ORTHO05D006080 4.7e-47 193.4 733 30.4
Nn4g23527 Nelumbo nucifera HOM05D005042 ORTHO05D006080 6.1e-47 193.0 675 31.6
Eucgr.G02425 Eucalyptus grandis HOM05D005042 ORTHO05D006080 1.0e-46 192.2 564 33.3
MBI16_g07040_MAGBIO Magnolia biondii HOM05D005042 ORTHO05D006080 1.3e-44 185.3 639 35.1
Cc11_g11610 Coffea canephora HOM05D005042 ORTHO05D006080 1.7e-44 184.9 648 31.6
CDE10G0431 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 2.2e-44 184.5 551 33.2
Dinv34024 Davidia involucrata HOM05D005042 ORTHO05D006080 8.3e-44 182.6 714 30.5
TWI31G0262 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 1.8e-43 181.4 654 30.3
EL10Ac6g14684 Beta vulgaris HOM05D005042 ORTHO05D006080 2.4e-43 181.0 558 32.1
Prupe.1G292900 Prunus persica HOM05D005042 ORTHO05D006080 2.4e-43 181.0 655 30.1
Duzib251G0840 Durio zibethinus HOM05D005042 ORTHO05D006080 3.2e-43 180.6 636 31.6
Thecc.02G323700 Theobroma cacao HOM05D005042 ORTHO05D006080 3.2e-43 180.6 647 31.7
Actinidia07770 Actinidia chinensis HOM05D005042 ORTHO05D006080 7.0e-43 179.5 678 30.2
PSO063G2731 Papaver somniferum HOM05D005042 ORTHO05D006080 9.2e-43 179.1 607 32.3
PSO782G3512 Papaver somniferum HOM05D005042 ORTHO05D006080 9.2e-43 179.1 607 32.0
Lj3A1027T86 Lonicera japonica HOM05D005042 ORTHO05D006080 2.7e-42 177.6 507 32.9
Migut.E00252 Erythranthe guttata HOM05D005042 ORTHO05D006080 1.0e-41 175.6 175 56.6
Phvul.003G038600 Phaseolus vulgaris HOM05D005042 ORTHO05D006080 1.3e-41 175.3 582 32.1
TAR629G0517 Trochodendron aralioides HOM05D005042 ORTHO05D006080 6.6e-41 172.9 733 32.1
CiPaw.05G122400 Carya illinoinensis HOM05D005042 ORTHO05D006080 8.6e-41 172.6 717 29.6
AUR62007879 Chenopodium quinoa HOM05D005042 ORTHO05D006080 1.5e-40 171.8 450 34.2
Lalb_Chr17g0341431 Lupinus albus HOM05D005042 ORTHO05D006080 1.9e-40 171.4 161 60.9
CsaV3_6G033840 Cucumis sativus L. HOM05D005042 ORTHO05D006080 2.5e-40 171.0 176 54.0
COL.COLO4_27836 Corchorus olitorius HOM05D005042 ORTHO05D006080 9.5e-40 169.1 171 58.5
MELO3C011406.2 Cucumis melo HOM05D005042 ORTHO05D006080 2.1e-39 167.9 161 56.5
ECA246G3902 Erigeron canadensis HOM05D005042 ORTHO05D006080 2.1e-39 167.9 535 31.0
AUR62003064 Chenopodium quinoa HOM05D005042 ORTHO05D006080 2.8e-39 167.5 457 34.1
Lsat_1_v5_gn_3_106381 Lactuca sativa HOM05D005042 ORTHO05D006080 8.0e-39 166.0 160 58.8
SGA_v2.0_scaffold287G47187 Striga asiatica HOM05D005042 ORTHO05D006080 1.4e-38 165.2 627 29.2
unitig_62.g23700 Utricularia gibba HOM05D005042 ORTHO05D006080 2.3e-38 164.5 168 55.4
Glyma.02G122200 Glycine max HOM05D005042 ORTHO05D006080 4.0e-38 163.7 579 31.3
Oeu055079.1 Olea europaea HOM05D005042 ORTHO05D006080 5.2e-38 163.3 162 58.6
HanXRQChr17g0570091 Helianthus annuus HOM05D005042 ORTHO05D006080 6.8e-38 162.9 160 59.4
Sabra08G0082800 Salix brachista HOM05D005042 ORTHO05D006080 6.8e-38 162.9 697 29.3
Lj2g0019338 Lotus japonicus HOM05D005042 ORTHO05D006080 2.0e-37 161.4 169 53.8
TWI79G1206 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 2.6e-37 161.0 652 29.3
Oeu024162.6 Olea europaea HOM05D005042 ORTHO05D006080 9.8e-37 159.1 537 30.4
PGR119G2532 Punica granatum HOM05D005042 ORTHO05D006080 4.9e-36 156.8 669 30.2
ClCG08G010560 Citrullus lanatus HOM05D005042 ORTHO05D006080 6.4e-36 156.4 196 46.9
Atru.chr11.1578 Acer truncatum HOM05D005042 ORTHO05D006080 2.4e-35 154.5 721 28.4
MD16G1056300 Malus domestica HOM05D005042 ORTHO05D006080 2.4e-35 154.5 505 30.5
Solyc05g011950.3 Solanum lycopersicum HOM05D005042 ORTHO05D006080 5.4e-35 153.3 164 54.9
CSS0000751 Camellia sinensis var. sinensis HOM05D005042 ORTHO05D006080 9.2e-35 152.5 720 28.8
Ciclev10030834m.g Citrus clementina HOM05D005042 ORTHO05D006080 9.2e-35 152.5 698 27.4
Aqoxy3G03731 Aquilegia oxysepala HOM05D005042 ORTHO05D006080 2.0e-34 151.4 781 26.9
Oeu057419.1 Olea europaea HOM05D005042 ORTHO05D006080 4.6e-34 150.2 651 28.4
SEGI_40784 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 4.6e-34 150.2 557 29.8
Gorai.009G327100 Gossypium raimondii HOM05D005042 ORTHO05D006080 6.0e-34 149.8 611 29.6
Gohir.A05G306900 Gossypium hirsutum HOM05D005042 ORTHO05D006080 7.8e-34 149.4 613 30.2
Gohir.D05G307200 Gossypium hirsutum HOM05D005042 ORTHO05D006080 2.3e-33 147.9 611 29.6
HPP92_000883 Vanilla planifolia HOM05D005042 ORTHO05D006080 6.6e-33 146.4 556 29.0
Cpa.g.sc1.165 Carica papaya HOM05D005042 ORTHO05D006080 8.6e-33 146.0 654 28.6
VMungo1215G3453 Vigna mungo HOM05D005042 ORTHO05D006080 3.3e-32 144.1 134 61.2
Psat2g093520 Pisum sativum HOM05D005042 ORTHO05D006080 5.6e-32 143.3 170 48.8
ATR0827G068 Amborella trichopoda HOM05D005042 ORTHO05D006080 9.5e-32 142.5 434 31.8
Lalb_Chr10g0099121 Lupinus albus HOM05D005042 ORTHO05D006080 1.6e-31 141.7 166 54.2
arahy.Tifrunner.gnm1.ann1.U4ZHW1 Arachis hypogaea HOM05D005042 ORTHO05D006080 2.8e-31 141.0 591 29.1
AagrBONN_evm.TU.Sc2ySwM_117.2775 Anthoceros agrestis HOM05D005042 ORTHO05D006080 4.7e-31 140.2 161 51.6
THA.LOC104821992 Tarenaya hassleriana HOM05D005042 ORTHO05D006080 4.7e-31 140.2 597 29.8
Peaxi162Scf00188g01341 Petunia axillaris HOM05D005042 ORTHO05D006080 6.2e-31 139.8 584 30.1
Medtr5g047140 Medicago truncatula HOM05D005042 ORTHO05D006080 3.1e-30 137.5 171 48.0
Rhsim09G0122700 Rhododendron simsii HOM05D005042 ORTHO05D006080 3.1e-30 137.5 738 27.2
Pp3c1_680 Physcomitrium patens HOM05D005042 ORTHO05D006080 5.2e-30 136.7 165 49.1
TPR.G34179 Trifolium pratense HOM05D005042 ORTHO05D006080 2.0e-29 134.8 173 48.6
vmacro10479 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 3.4e-29 134.0 703 26.6
arahy.Tifrunner.gnm1.ann1.L0BNS4 Arachis hypogaea HOM05D005042 ORTHO05D006080 5.8e-29 133.3 114 62.3
Aa31LG4G11790 Aethionema arabicum HOM05D005042 ORTHO05D006080 7.5e-29 132.9 576 29.5
Sopen05g006680 Solanum pennellii HOM05D000061 ORTHO05D000050 1.3e-28 132.1 149 52.3
MD13G1056900 Malus domestica HOM05D005042 ORTHO05D006080 2.9e-28 131.0 502 29.5
Nitab4.5_0012072g0010 Nicotiana tabacum HOM05D005042 ORTHO05D006080 3.7e-28 130.6 164 50.6
Sabra10G0107300 Salix brachista HOM05D005042 ORTHO05D006080 1.1e-27 129.0 659 29.0
Solyc05g011930.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.9e-27 128.3 560 29.1
Sopen05g006670 Solanum pennellii HOM05D005042 ORTHO05D006080 2.4e-27 127.9 563 29.3
PGSC0003DMG400028304 Solanum tuberosum HOM05D005042 ORTHO05D006080 2.4e-27 127.9 574 29.6
CARHR061940 Cardamine hirsuta HOM05D005042 ORTHO05D006080 3.2e-27 127.5 162 46.9
QL05p008217 Quercus lobata HOM05D005042 ORTHO05D006080 3.2e-27 127.5 176 48.3
SEGI_37091 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 3.2e-27 127.5 407 31.9
CAN.G1021.10 Capsicum annuum HOM05D005042 ORTHO05D006080 2.1e-26 124.8 164 48.8
CAN.G1021.18 Capsicum annuum HOM05D005042 ORTHO05D006080 7.8e-26 122.9 138 51.4
Carub.0002s1568 Capsella rubella HOM05D005042 ORTHO05D006080 1.0e-25 122.5 559 29.9
Oeu021807.1 Olea europaea HOM05D005042 ORTHO05D006080 1.0e-25 122.5 555 27.6
CAN.G1021.3 Capsicum annuum HOM05D005042 ORTHO05D006080 1.7e-25 121.7 606 29.2
Sp5g24160 Schrenkiella parvula HOM05D005042 ORTHO05D006080 5.1e-25 120.2 549 27.7
RcHm_v2.0_Chr4g0437421 Rosa chinensis HOM05D005042 ORTHO05D006080 1.9e-24 118.2 162 45.1
FAN07G1705 Fragaria x ananassa HOM05D005042 ORTHO05D006080 7.3e-24 116.3 163 47.2
Lsat_1_v5_gn_4_25561 Lactuca sativa HOM05D005042 ORTHO05D006080 7.3e-24 116.3 158 45.6
AT1G69060 Arabidopsis thaliana HOM05D005042 ORTHO05D006080 9.5e-24 115.9 572 28.5
Nitab4.5_0000027g0180 Nicotiana tabacum HOM05D005042 ORTHO05D006080 1.2e-23 115.5 176 46.0
Mapoly0211s0012 Marchantia polymorpha HOM05D005042 ORTHO05D006080 2.8e-23 114.4 158 41.8
Sc04g0007390 Simmondsia chinensis HOM05D005042 ORTHO05D006080 2.8e-23 114.4 574 29.3
Pp3c2_29040 Physcomitrium patens HOM05D005042 ORTHO05D006080 8.1e-23 112.8 165 44.2
FAN17G2893 Fragaria x ananassa HOM05D005042 ORTHO05D006080 1.1e-22 112.5 513 28.5
TPR.G38503 Trifolium pratense HOM05D005042 ORTHO05D006080 1.1e-22 112.5 537 26.1
GSVIVG01012257001 Vitis vinifera HOM05D005042 ORTHO05D006080 1.8e-22 111.7 618 27.2
Ca_05058_v3 Cicer arietinum L. HOM05D005042 ORTHO05D006080 5.2e-22 110.2 162 43.8
Thhalv10018302m.g Eutrema salsugineum HOM05D005042 ORTHO05D006080 2.0e-21 108.2 474 27.4
ECA234G0547 Erigeron canadensis HOM05D005042 ORTHO05D006080 2.6e-21 107.8 159 42.8
FAN22G1919 Fragaria x ananassa HOM05D005042 ORTHO05D006080 4.4e-21 107.1 163 43.6
COL.COLO4_27818 Corchorus olitorius HOM05D005042 ORTHO05D006080 9.9e-21 105.9 637 27.8
TPR.G37754 Trifolium pratense HOM05D005042 ORTHO05D006080 1.7e-20 105.1 555 27.6
CAN.G1021.20 Capsicum annuum HOM05D005042 ORTHO05D006080 2.2e-20 104.8 150 43.3
Os03g0752700 Oryza sativa ssp. japonica HOM05D005042 ORTHO05D006080 2.2e-20 104.8 160 44.4
Glyma.01G064400 Glycine max HOM05D005042 ORTHO05D006080 4.9e-20 103.6 595 31.4
FvH4_4g29350 Fragaria vesca HOM05D005042 ORTHO05D006080 8.3e-20 102.8 512 27.7
FAN12G1549 Fragaria x ananassa HOM05D005042 ORTHO05D006080 8.3e-20 102.8 163 43.6
CDE10G0071 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 1.4e-19 102.1 470 28.3
DCAR_030054 Daucus carota HOM05D005042 ORTHO05D006080 1.9e-19 101.7 517 26.7
PGSC0003DMG400028305 Solanum tuberosum HOM05D005042 ORTHO05D006080 2.4e-19 101.3 89 64.0
Zm00001eb057530 Zea mays HOM05D005042 ORTHO05D006080 2.4e-19 101.3 539 29.5
BolC6t39355H Brassica oleracea HOM05D005042 ORTHO05D006080 4.1e-19 100.5 159 42.1
Dinv15585 Davidia involucrata HOM05D005042 ORTHO05D006080 4.1e-19 100.5 74 70.3
CAN.G1021.19 Capsicum annuum HOM05D005042 ORTHO05D006080 1.2e-18 99.0 142 46.5
CAN.G1021.24 Capsicum annuum HOM05D005042 ORTHO05D006080 1.6e-18 98.6 133 46.6
DCAR_023741 Daucus carota HOM05D005042 ORTHO05D006080 2.1e-18 98.2 101 51.5
HanXRQChr16g0527171 Helianthus annuus HOM05D005042 ORTHO05D006080 2.7e-18 97.8 162 43.8
Nn3g17525 Nelumbo nucifera HOM05D005042 ORTHO05D006080 7.8e-18 96.3 639 25.8
C06p40780 Brassica napus HOM05D005042 ORTHO05D006080 1.3e-17 95.5 526 25.5
TAR371G1032 Trochodendron aralioides HOM05D005042 ORTHO05D006080 3.9e-17 94.0 384 28.6
A07p35450 Brassica napus HOM05D005042 ORTHO05D006080 1.9e-16 91.7 159 40.3
BraA07t31136Z Brassica rapa HOM05D005042 ORTHO05D006080 1.9e-16 91.7 159 40.3
Solyc05g011960.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 5.6e-16 90.1 87 56.3
DCAR_007205 Daucus carota HOM05D005042 ORTHO05D006080 2.8e-15 87.8 536 25.6
AL2G28110 Arabidopsis lyrata HOM05D005042 ORTHO05D006080 3.6e-15 87.4 495 24.2
Sopen05g006700 Solanum pennellii HOM05D005042 ORTHO05D006080 3.6e-15 87.4 85 55.3
CBR_g19648 Chara braunii HOM05D005042 ORTHO05D006080 1.1e-14 85.9 103 47.6
Ah.03g138660 Amaranthus hybridus HOM05D000485 ORTHO05D000341 1.5e-13 82.0 551 24.7
Manes.14G088800 Manihot esculenta HOM05D005042 ORTHO05D006080 8.4e-12 76.3 459 27.9
Dinv15584 Davidia involucrata HOM05D000485 ORTHO05D000341 3.5e-10 70.9 567 24.5
Sed0017498 Sechium edule HOM05D005042 ORTHO05D006080 1.0e-09 69.3 106 40.6
SMO361G0045 Selaginella moellendorffii HOM05D005042 ORTHO05D006080 1.8e-06 58.5 78 43.6


User provided reference genes

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