Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3378 Papaver somniferum HOM05D007504 ORTHO05D007629 0.0e+00 1890.2 1211 100.0
Aqoxy2G03947 Aquilegia oxysepala HOM05D007504 ORTHO05D007629 3.3e-24 118.6 252 39.3
Peaxi162Scf00994g00026 Petunia axillaris HOM05D007504 ORTHO05D007629 9.5e-24 117.1 178 44.9
Dinv02913 Davidia involucrata HOM05D007504 ORTHO05D007629 2.3e-22 112.5 129 50.4
Solyc04g051280.4 Solanum lycopersicum HOM05D007504 ORTHO05D007629 1.2e-21 110.2 152 46.7
PGSC0003DMG400016931 Solanum tuberosum HOM05D007504 ORTHO05D007629 2.0e-21 109.4 152 47.4
Nitab4.5_0000456g0090 Nicotiana tabacum HOM05D007504 ORTHO05D007629 4.4e-21 108.2 178 43.8
Nitab4.5_0000276g0060 Nicotiana tabacum HOM05D007504 ORTHO05D007629 7.5e-21 107.5 178 43.3
CAN.G29.22 Capsicum annuum HOM05D007504 ORTHO05D007629 2.2e-20 105.9 175 42.3
Rhsim09G0131100 Rhododendron simsii HOM05D007504 ORTHO05D007629 2.2e-20 105.9 71 69.0
Sopen04g022690 Solanum pennellii HOM05D007504 ORTHO05D007629 2.2e-20 105.9 152 46.1
Ciclev10011923m.g Citrus clementina HOM05D007504 ORTHO05D007629 2.9e-20 105.5 290 30.7
Sabra19G0056400 Salix brachista HOM05D007504 ORTHO05D007629 1.1e-19 103.6 73 65.8
Ah.06g195770 Amaranthus hybridus HOM05D007504 ORTHO05D007629 1.4e-19 103.2 124 47.6
TAR636G3585 Trochodendron aralioides HOM05D007504 ORTHO05D007629 1.4e-19 103.2 104 48.1
COL.COLO4_06844 Corchorus olitorius HOM05D007504 ORTHO05D007629 7.0e-19 100.9 319 28.2
TAR636G2263 Trochodendron aralioides HOM05D007504 ORTHO05D007629 7.0e-19 100.9 69 65.2
Oeu008540.1 Olea europaea HOM05D007504 ORTHO05D007629 9.2e-19 100.5 114 49.1
Haze_04521 Corylus avellana HOM05D007504 ORTHO05D007629 1.2e-18 100.1 73 69.9
MD04G1241000 Malus domestica HOM05D007504 ORTHO05D007629 1.2e-18 100.1 84 58.3
RcHm_v2.0_Chr3g0448301 Rosa chinensis HOM05D007504 ORTHO05D007629 1.2e-18 100.1 319 30.1
Gorai.002G147900 Gossypium raimondii HOM05D007504 ORTHO05D007629 2.7e-18 99.0 112 44.6
Lj7A601T114 Lonicera japonica HOM05D007504 ORTHO05D007629 2.7e-18 99.0 107 52.3
MD12G1258000 Malus domestica HOM05D007504 ORTHO05D007629 2.7e-18 99.0 323 29.7
Thecc.05G204700 Theobroma cacao HOM05D007504 ORTHO05D007629 3.5e-18 98.6 1243 22.5
GSVIVG01019149001 Vitis vinifera HOM05D007504 ORTHO05D007629 3.5e-18 98.6 74 66.2
Actinidia38910 Actinidia chinensis HOM05D007504 ORTHO05D007629 4.6e-18 98.2 300 32.3
CDE05G2205 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 6.0e-18 97.8 136 42.6
Potri.019G052300 Populus trichocarpa HOM05D007504 ORTHO05D007629 6.0e-18 97.8 304 29.9
Cfa006286 Carpinus fangiana HOM05D007504 ORTHO05D007629 7.8e-18 97.4 131 45.0
DCAR_029902 Daucus carota HOM05D007504 ORTHO05D007629 7.8e-18 97.4 169 37.3
Atru.chr12.1547 Acer truncatum HOM05D007504 ORTHO05D007629 1.3e-17 96.7 83 62.7
ECA233G2160 Erigeron canadensis HOM05D007504 ORTHO05D007629 1.3e-17 96.7 127 44.9
Gohir.D13G093400 Gossypium hirsutum HOM05D007504 ORTHO05D007629 1.3e-17 96.7 290 30.7
CSS0023929 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 1.7e-17 96.3 122 44.3
CSS0043883 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 1.7e-17 96.3 122 44.3
Migut.F01885 Erythranthe guttata HOM05D007504 ORTHO05D007629 1.7e-17 96.3 157 39.5
MBI07_g00623_MAGBIO Magnolia biondii HOM05D007504 ORTHO05D007629 2.3e-17 95.9 192 37.5
CDE05G0344 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 3.0e-17 95.5 60 75.0
Manes.08G105000 Manihot esculenta HOM05D007504 ORTHO05D007629 3.0e-17 95.5 96 56.2
FAN09G1848 Fragaria x ananassa HOM05D007504 ORTHO05D007629 3.9e-17 95.1 148 40.5
PGR031G1611 Punica granatum HOM05D007504 ORTHO05D007629 3.9e-17 95.1 292 30.1
QL01p050471 Quercus lobata HOM05D007504 ORTHO05D007629 5.1e-17 94.7 71 64.8
THA.LOC104823805 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 5.1e-17 94.7 83 57.8
Lj5g0006161 Lotus japonicus HOM05D007504 ORTHO05D007629 6.6e-17 94.4 185 34.6
Gohir.A13G089900 Gossypium hirsutum HOM05D007504 ORTHO05D007629 8.6e-17 94.0 112 42.9
Hund21875 Selenicereus undatus HOM05D007504 ORTHO05D007629 8.6e-17 94.0 318 31.1
FvH4_6g00830 Fragaria vesca HOM05D007504 ORTHO05D007629 1.1e-16 93.6 149 41.6
FAN14G3522 Fragaria x ananassa HOM05D007504 ORTHO05D007629 1.1e-16 93.6 149 41.6
ATR0609G092 Amborella trichopoda HOM05D007504 ORTHO05D007629 1.5e-16 93.2 74 60.8
Duzib177G0136 Durio zibethinus HOM05D007504 ORTHO05D007629 1.5e-16 93.2 315 28.9
FAN05G3219 Fragaria x ananassa HOM05D007504 ORTHO05D007629 2.5e-16 92.4 149 40.9
Sc09g0001640 Simmondsia chinensis HOM05D007504 ORTHO05D007629 4.3e-16 91.7 98 53.1
Ca_09972_v3 Cicer arietinum L. HOM05D007504 ORTHO05D007629 5.6e-16 91.3 194 36.1
Medtr1g078420 Medicago truncatula HOM05D007504 ORTHO05D007629 7.3e-16 90.9 321 28.0
Eucgr.H01377 Eucalyptus grandis HOM05D007504 ORTHO05D007629 1.2e-15 90.1 336 27.4
HanXRQChr05g0156881 Helianthus annuus HOM05D007504 ORTHO05D007629 1.6e-15 89.7 88 55.7
TPR.G14656 Trifolium pratense HOM05D007504 ORTHO05D007629 2.1e-15 89.4 293 29.0
Cc09_g03320 Coffea canephora HOM05D007504 ORTHO05D007629 2.8e-15 89.0 147 41.5
Cpa.g.sc123.14 Carica papaya HOM05D007504 ORTHO05D007629 3.6e-15 88.6 75 61.3
AUR62006721 Chenopodium quinoa HOM05D007504 ORTHO05D007629 3.6e-15 88.6 75 60.0
Psat6g051960 Pisum sativum HOM05D007504 ORTHO05D007629 4.7e-15 88.2 252 31.3
TWI14G0943 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 4.7e-15 88.2 159 35.8
EL10Ac4g09412 Beta vulgaris HOM05D007504 ORTHO05D007629 1.4e-14 86.7 137 40.9
CsaV3_1G037800 Cucumis sativus L. HOM05D007504 ORTHO05D007629 1.4e-14 86.7 106 46.2
Lsat_1_v5_gn_8_3001 Lactuca sativa HOM05D007504 ORTHO05D007629 1.8e-14 86.3 67 53.7
Oeu014606.1 Olea europaea HOM05D007504 ORTHO05D007629 2.3e-14 85.9 66 62.1
TWI59G0549 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 2.3e-14 85.9 309 29.8
CSS0029071 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 4.0e-14 85.1 72 66.7
AUR62000366 Chenopodium quinoa HOM05D007504 ORTHO05D007629 5.2e-14 84.7 68 61.8
Prupe.6G358500 Prunus persica HOM05D007504 ORTHO05D007629 6.8e-14 84.3 65 60.0
Carub.0007s3177 Capsella rubella HOM05D009566 ORTHO05D007629 2.6e-13 82.4 119 41.2
AL2G19730 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 4.4e-13 81.6 142 40.8
CiPaw.07G074500 Carya illinoinensis HOM05D007504 ORTHO05D007629 4.4e-13 81.6 349 27.2
Sc09g0001620 Simmondsia chinensis HOM05D007504 ORTHO05D007629 5.8e-13 81.3 127 40.9
AT5G36100 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 1.3e-12 80.1 118 39.0
arahy.Tifrunner.gnm1.ann1.DN7JE5 Arachis hypogaea HOM05D007504 ORTHO05D007629 1.3e-12 80.1 76 52.6
arahy.Tifrunner.gnm1.ann1.V3BTAU Arachis hypogaea HOM05D007504 ORTHO05D007629 1.7e-12 79.7 76 51.3
ATR0609G018 Amborella trichopoda HOM05D007504 ORTHO05D007629 3.7e-12 78.6 65 52.3
QL01p050434 Quercus lobata HOM05D007504 ORTHO05D007629 4.9e-12 78.2 393 27.0
MELO3C021807.2 Cucumis melo HOM05D007504 ORTHO05D007629 8.3e-12 77.4 148 35.8
BcaB02g08045 Brassica carinata HOM05D009566 ORTHO05D007629 7.1e-11 74.3 119 41.2
Os12g0506700 Oryza sativa ssp. japonica HOM05D007504 ORTHO05D007629 7.1e-11 74.3 77 48.1
VMungo0720G1881 Vigna mungo HOM05D007504 ORTHO05D007629 9.2e-11 73.9 86 45.3
CARHR056580 Cardamine hirsuta HOM05D009566 ORTHO05D007629 1.2e-10 73.6 89 46.1
CARHR216660 Cardamine hirsuta HOM05D009566 ORTHO05D007629 1.2e-10 73.6 142 36.6
AT1G65090 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 1.6e-10 73.2 141 37.6
Phvul.010G077946 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 1.6e-10 73.2 77 45.5
Sed0012429 Sechium edule HOM05D007504 ORTHO05D007629 2.1e-10 72.8 68 52.9
Aa31LG2G2280 Aethionema arabicum HOM05D009566 ORTHO05D007629 2.7e-10 72.4 75 46.7
C02p21140 Brassica napus HOM05D009566 ORTHO05D007629 3.5e-10 72.0 89 46.1
Lalb_Chr21g0311381 Lupinus albus HOM05D007504 ORTHO05D007629 3.5e-10 72.0 319 27.9
SHI33673 Sapria himalayana HOM05D007504 ORTHO05D000001 3.5e-10 72.0 87 43.7
Sp5g19730 Schrenkiella parvula HOM05D009566 ORTHO05D007629 3.5e-10 72.0 65 49.2
A02p13020 Brassica napus HOM05D009566 ORTHO05D007629 4.6e-10 71.6 89 46.1
ClCG01G008930 Citrullus lanatus HOM05D007504 ORTHO05D007629 4.6e-10 71.6 86 45.3
BraA02t06358Z Brassica rapa HOM05D009566 ORTHO05D007629 6.0e-10 71.2 182 29.7
Thhalv10005424m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 7.8e-10 70.9 74 48.6
BraA04t16670Z Brassica rapa HOM05D009566 ORTHO05D007629 1.0e-09 70.5 93 41.9
Glyma.20G219900 Glycine max HOM05D007504 ORTHO05D007629 1.7e-09 69.7 147 32.7
BcaC03g14675 Brassica carinata HOM05D009566 ORTHO05D007629 2.3e-09 69.3 76 48.7
BolC2t08254H Brassica oleracea HOM05D009566 ORTHO05D007629 2.3e-09 69.3 76 48.7
Sp7g06100 Schrenkiella parvula HOM05D009566 ORTHO05D007629 2.3e-09 69.3 161 32.3
Aa31LG9G17880 Aethionema arabicum HOM05D009566 ORTHO05D007629 3.0e-09 68.9 113 35.4
Glyma.10G170100 Glycine max HOM05D007504 ORTHO05D007629 3.0e-09 68.9 60 53.3
SalBow6G5451 Salvia bowleyana HOM05D007504 ORTHO05D007629 3.0e-09 68.9 63 52.4
THA.LOC104821804 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 3.0e-09 68.9 70 45.7
BcaB05g24082 Brassica carinata HOM05D009566 ORTHO05D007629 3.9e-09 68.6 174 31.0
BcaC02g09508 Brassica carinata HOM05D009566 ORTHO05D007629 3.9e-09 68.6 76 46.1
A04p10080 Brassica napus HOM05D009566 ORTHO05D007629 3.9e-09 68.6 76 46.1
C04p43550 Brassica napus HOM05D009566 ORTHO05D007629 3.9e-09 68.6 76 46.1
Carub.0002s1043 Capsella rubella HOM05D009566 ORTHO05D007629 6.6e-09 67.8 73 45.2
SGA_v2.0_scaffold10G05147 Striga asiatica HOM05D007504 ORTHO05D007629 6.6e-09 67.8 75 46.7
Nn1g08319 Nelumbo nucifera HOM05D007504 ORTHO05D007629 8.6e-09 67.4 50 62.0
AL7G45070 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 2.5e-08 65.9 65 47.7
BcaB06g27006 Brassica carinata HOM05D009566 ORTHO05D007629 4.3e-08 65.1 98 38.8
SEGI_35581 Sequoiadendron giganteum HOM05D007504 ORTHO05D007629 4.3e-08 65.1 177 31.1
HPP92_009958 Vanilla planifolia HOM05D007504 ORTHO05D007629 5.6e-08 64.7 68 45.6
HPP92_020229 Vanilla planifolia HOM05D007504 ORTHO05D007629 1.2e-07 63.5 56 48.2
BolC4t25935H Brassica oleracea HOM05D009566 ORTHO05D007629 1.6e-07 63.2 256 28.1
Phvul.010G077868 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 4.7e-07 61.6 147 28.6
Cpa.g.sc123.15 Carica papaya HOM05D007504 ORTHO05D007629 1.4e-06 60.1 66 47.0


User provided reference genes

Program Settings