Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3308 Papaver somniferum HOM05D005604 ORTHO05D006745 0.0e+00 1097.0 549 100.0
PSO063G0087 Papaver somniferum HOM05D005604 ORTHO05D006745 0.0e+00 1077.4 549 98.0
TAR362G0631 Trochodendron aralioides HOM05D005604 ORTHO05D006745 2.0e-210 736.1 562 70.6
CSS0000075 Camellia sinensis var. sinensis HOM05D005604 ORTHO05D006745 2.8e-201 705.7 566 67.5
TAR633G2144 Trochodendron aralioides HOM05D005604 ORTHO05D006745 8.2e-201 704.1 560 67.7
Dinv19175 Davidia involucrata HOM05D005604 ORTHO05D006745 1.1e-200 703.7 564 67.7
Dinv12653 Davidia involucrata HOM05D005604 ORTHO05D006745 9.1e-200 700.7 565 67.8
Prupe.8G199200 Prunus persica HOM05D005604 ORTHO05D006745 1.0e-198 697.2 560 67.9
MBI07_g18990_MAGBIO Magnolia biondii HOM05D005604 ORTHO05D006745 1.1e-197 693.7 558 68.3
QL09p051278 Quercus lobata HOM05D005604 ORTHO05D006745 3.2e-197 692.2 553 67.6
FAN27G1924 Fragaria x ananassa HOM05D005604 ORTHO05D006745 4.2e-197 691.8 562 67.3
FAN24G1841 Fragaria x ananassa HOM05D005604 ORTHO05D006745 6.1e-196 688.0 562 66.7
FvH4_2g18560 Fragaria vesca HOM05D005604 ORTHO05D006745 2.0e-194 682.9 562 66.4
RcHm_v2.0_Chr6g0284121 Rosa chinensis HOM05D005604 ORTHO05D006745 5.7e-194 681.4 562 66.4
COL.COLO4_15621 Corchorus olitorius HOM05D005604 ORTHO05D006745 3.7e-193 678.7 569 66.1
FAN15G1583 Fragaria x ananassa HOM05D005604 ORTHO05D006745 4.8e-193 678.3 562 65.8
CiPaw.01G050300 Carya illinoinensis HOM05D005604 ORTHO05D006745 2.4e-192 676.0 565 66.2
Atru.chr6.1423 Acer truncatum HOM05D005604 ORTHO05D006745 4.1e-192 675.2 572 64.7
Actinidia39432 Actinidia chinensis HOM05D005604 ORTHO05D006745 9.1e-192 674.1 563 65.9
Thecc.01G220400 Theobroma cacao HOM05D005604 ORTHO05D006745 2.0e-191 672.9 561 65.4
Gorai.001G231700 Gossypium raimondii HOM05D005604 ORTHO05D006745 3.8e-190 668.7 560 65.2
Duzib138G1747 Durio zibethinus HOM05D005604 ORTHO05D006745 5.0e-190 668.3 562 65.1
Gohir.D07G205700 Gossypium hirsutum HOM05D005604 ORTHO05D006745 6.6e-190 667.9 560 65.4
GSVIVG01003930001 Vitis vinifera HOM05D005604 ORTHO05D006745 6.6e-190 667.9 563 65.9
Potri.002G245700 Populus trichocarpa HOM05D005604 ORTHO05D006745 8.6e-190 667.5 564 63.8
Cpa.g.sc43.114 Carica papaya HOM05D005604 ORTHO05D006745 1.5e-189 666.8 565 64.1
Aqoxy2G03983 Aquilegia oxysepala HOM05D005604 ORTHO05D006745 1.2e-188 663.7 563 65.2
Hma1.2p1_0226F.1_g095420 Hydrangea macrophylla HOM05D005604 ORTHO05D006745 1.6e-188 663.3 557 66.1
Duzib133G0023 Durio zibethinus HOM05D005604 ORTHO05D006745 2.8e-188 662.5 561 65.6
Gohir.A07G199300 Gossypium hirsutum HOM05D005604 ORTHO05D006745 2.8e-188 662.5 559 65.3
CANSAT01G1141 Cannabis sativa HOM05D005604 ORTHO05D006745 1.0e-187 660.6 566 64.8
MD10G1160100 Malus domestica HOM05D005604 ORTHO05D006745 3.0e-187 659.1 560 65.2
Nitab4.5_0009005g0020 Nicotiana tabacum HOM05D005604 ORTHO05D006745 3.0e-187 659.1 554 64.8
CiPaw.02G023400 Carya illinoinensis HOM05D005604 ORTHO05D006745 7.5e-186 654.4 559 64.6
MD05G1171800 Malus domestica HOM05D005604 ORTHO05D006745 7.5e-186 654.4 562 64.1
Sopen06g034740 Solanum pennellii HOM05D005604 ORTHO05D006745 2.8e-185 652.5 550 64.2
PGSC0003DMG400020164 Solanum tuberosum HOM05D005604 ORTHO05D006745 1.8e-184 649.8 550 64.5
MSTRG.18511 Avicennia marina HOM05D005604 ORTHO05D006745 3.1e-184 649.0 558 64.2
Actinidia30055 Actinidia chinensis HOM05D005604 ORTHO05D006745 5.4e-184 648.3 529 67.1
CAN.G874.4 Capsicum annuum HOM05D005604 ORTHO05D006745 9.2e-184 647.5 555 64.0
Ciclev10019544m.g Citrus clementina HOM05D005604 ORTHO05D006745 7.8e-183 644.4 571 63.4
PGSC0003DMG400027951 Solanum tuberosum HOM05D005604 ORTHO05D006745 3.8e-182 642.1 556 63.7
Solyc06g083370.3 Solanum lycopersicum HOM05D005604 ORTHO05D006745 1.5e-181 640.2 550 63.3
vmacro02782 Vaccinium macrocarpon HOM05D005604 ORTHO05D006745 4.3e-181 638.6 618 60.0
Nitab4.5_0003020g0080 Nicotiana tabacum HOM05D005604 ORTHO05D006745 5.6e-181 638.3 573 62.0
TWI36G0921 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 5.6e-181 638.3 566 63.3
Migut.D00766 Erythranthe guttata HOM05D005604 ORTHO05D006745 1.6e-180 636.7 554 63.2
Sopen09g022640 Solanum pennellii HOM05D005604 ORTHO05D006745 2.8e-180 636.0 557 63.2
Solyc09g059470.4 Solanum lycopersicum HOM05D005604 ORTHO05D006745 3.6e-180 635.6 557 63.4
Rhsim13G0047500 Rhododendron simsii HOM05D005604 ORTHO05D006745 1.8e-179 633.3 570 63.3
Eucgr.K02139 Eucalyptus grandis HOM05D005604 ORTHO05D006745 5.2e-179 631.7 561 63.1
CsaV3_7G026370 Cucumis sativus L. HOM05D005604 ORTHO05D006745 6.4e-177 624.8 566 62.4
ClCG09G008600 Citrullus lanatus HOM05D005604 ORTHO05D006745 3.2e-176 622.5 566 62.5
MELO3C021083.2 Cucumis melo HOM05D005604 ORTHO05D006745 1.0e-174 617.5 566 61.8
Haze_15255 Corylus avellana HOM05D005604 ORTHO05D006745 1.7e-174 616.7 642 56.9
TWI18G0325 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 5.0e-174 615.1 565 61.8
AUR62016550 Chenopodium quinoa HOM05D005604 ORTHO05D006745 7.3e-173 611.3 587 61.2
AUR62001131 Chenopodium quinoa HOM05D005604 ORTHO05D006745 1.2e-172 610.5 587 60.6
VMungo1383G0872 Vigna mungo HOM05D005604 ORTHO05D006745 6.2e-172 608.2 564 62.9
arahy.Tifrunner.gnm1.ann1.6511ZK Arachis hypogaea HOM05D005604 ORTHO05D006745 3.1e-171 605.9 565 62.3
arahy.Tifrunner.gnm1.ann1.S4VI32 Arachis hypogaea HOM05D005604 ORTHO05D006745 6.8e-171 604.7 559 62.8
Glyma.18G167400 Glycine max HOM05D005604 ORTHO05D006745 6.8e-171 604.7 563 62.3
Lalb_Chr13g0291101 Lupinus albus HOM05D005604 ORTHO05D006745 1.5e-170 603.6 564 60.3
Sed0019682 Sechium edule HOM05D005604 ORTHO05D006745 1.5e-170 603.6 569 60.8
Ah.15g093490 Amaranthus hybridus HOM05D005604 ORTHO05D006745 1.1e-168 597.4 592 57.8
DCAR_012669 Daucus carota HOM05D005604 ORTHO05D006745 1.4e-168 597.0 563 60.0
Lj1A89T69 Lonicera japonica HOM05D005604 ORTHO05D006745 2.4e-168 596.3 618 57.9
Lj1g0022594 Lotus japonicus HOM05D005604 ORTHO05D006745 3.2e-168 595.9 550 63.3
Psat3g148680 Pisum sativum HOM05D005604 ORTHO05D006745 3.2e-168 595.9 561 61.1
Medtr7g056243 Medicago truncatula HOM05D005604 ORTHO05D006745 2.1e-167 593.2 542 61.4
Glyma.08G349100 Glycine max HOM05D005604 ORTHO05D006745 2.3e-166 589.7 569 60.8
DCAR_004740 Daucus carota HOM05D005604 ORTHO05D006745 3.6e-164 582.4 564 58.3
EL10Ac7g17895 Beta vulgaris HOM05D005604 ORTHO05D006745 1.4e-163 580.5 590 56.6
HanXRQChr04g0108051 Helianthus annuus HOM05D005604 ORTHO05D006745 1.4e-163 580.5 565 59.1
Phvul.008G130900 Phaseolus vulgaris HOM05D005604 ORTHO05D006745 2.3e-163 579.7 554 62.3
Nitab4.5_0003317g0030 Nicotiana tabacum HOM05D005604 ORTHO05D006745 2.2e-161 573.2 694 50.0
Nitab4.5_0000045g0530 Nicotiana tabacum HOM05D005604 ORTHO05D006745 1.2e-159 567.4 693 49.5
PGR044G1204 Punica granatum HOM05D005604 ORTHO05D006745 1.0e-158 564.3 576 57.8
Peaxi162Scf00068g02416 Petunia axillaris HOM05D005604 ORTHO05D006745 6.6e-158 561.6 641 52.4
Cc01_g16720 Coffea canephora HOM05D005604 ORTHO05D006745 1.1e-157 560.8 563 57.0
Sabra02G0187000 Salix brachista HOM05D005604 ORTHO05D006745 1.9e-157 560.1 479 63.7
Lsat_1_v5_gn_9_15140 Lactuca sativa HOM05D005604 ORTHO05D006745 1.1e-155 554.3 561 57.9
THA.LOC104822492 Tarenaya hassleriana HOM05D005604 ORTHO05D006745 1.4e-155 553.9 570 57.5
Peaxi162Scf01312g00047 Petunia axillaris HOM05D005604 ORTHO05D006745 4.0e-155 552.4 477 62.7
Nn1g07990 Nelumbo nucifera HOM05D005604 ORTHO05D006745 5.2e-155 552.0 428 69.6
ECA236G4946 Erigeron canadensis HOM05D005604 ORTHO05D006745 2.0e-154 550.1 526 60.3
Aa31LG5G17790 Aethionema arabicum HOM05D005604 ORTHO05D006745 7.8e-151 538.1 573 56.4
AT3G07210 Arabidopsis thaliana HOM05D005604 ORTHO05D006745 1.1e-149 534.3 578 55.7
Lsat_1_v5_gn_8_89380 Lactuca sativa HOM05D005604 ORTHO05D006745 5.6e-149 531.9 562 55.0
Thhalv10020454m.g Eutrema salsugineum HOM05D005604 ORTHO05D006745 1.3e-148 530.8 578 56.2
CARHR081860 Cardamine hirsuta HOM05D005604 ORTHO05D006745 1.1e-147 527.7 584 54.6
AL3G18480 Arabidopsis lyrata HOM05D005604 ORTHO05D006745 1.4e-147 527.3 581 54.7
Sp3g06160 Schrenkiella parvula HOM05D005604 ORTHO05D006745 5.3e-147 525.4 583 56.3
Carub.0003s0673 Capsella rubella HOM05D005604 ORTHO05D006745 6.9e-147 525.0 581 55.1
THA.LOC104802659 Tarenaya hassleriana HOM05D005604 ORTHO05D006745 1.2e-146 524.2 579 55.6
Manes.13G049200 Manihot esculenta HOM05D005604 ORTHO05D006745 4.4e-146 522.3 460 62.0
BcaC05g29746 Brassica carinata HOM05D005604 ORTHO05D006745 5.8e-146 521.9 578 55.9
HanXRQChr10g0279511 Helianthus annuus HOM05D005604 ORTHO05D006745 7.6e-146 521.5 558 56.1
ATR0561G172 Amborella trichopoda HOM05D005604 ORTHO05D006745 4.9e-145 518.8 572 54.5
Zm00001eb143450 Zea mays HOM05D005604 ORTHO05D006745 2.1e-143 513.5 567 54.0
ECA247G0587 Erigeron canadensis HOM05D005604 ORTHO05D006745 1.5e-141 507.3 529 56.0
unitig_60.g25697 Utricularia gibba HOM05D005604 ORTHO05D006745 2.5e-141 506.5 556 54.0
HPP92_011784 Vanilla planifolia HOM05D005604 ORTHO05D006745 2.6e-138 496.5 568 54.2
BcaC05g29850 Brassica carinata HOM05D005604 ORTHO05D006745 6.4e-137 491.9 576 53.8
A05p41000 Brassica napus HOM05D005604 ORTHO05D006745 1.1e-136 491.1 573 53.8
C05p60150 Brassica napus HOM05D005604 ORTHO05D006745 1.1e-136 491.1 572 53.7
BolC5t34666H Brassica oleracea HOM05D005604 ORTHO05D006745 1.1e-136 491.1 572 53.7
BraA05t22827Z Brassica rapa HOM05D005604 ORTHO05D006745 3.2e-136 489.6 573 53.6
unitig_0.g223 Utricularia gibba HOM05D005604 ORTHO05D006745 2.1e-135 486.9 556 52.7
Os01g0917200 Oryza sativa ssp. japonica HOM05D005604 ORTHO05D006745 2.7e-135 486.5 525 53.9
CDE05G2031 Ceratophyllum demersum HOM05D005604 ORTHO05D006745 5.3e-131 472.2 553 51.0
Hund05575 Selenicereus undatus HOM05D005604 ORTHO05D006745 2.2e-121 440.3 598 47.3
Sc05g0001960 Simmondsia chinensis HOM05D005604 ORTHO05D006745 3.3e-117 426.4 398 58.8
DCAR_004736 Daucus carota HOM05D005604 ORTHO05D006745 1.4e-112 411.0 415 57.1
SGA_v2.0_scaffold158G37516 Striga asiatica HOM05D005604 ORTHO05D006745 1.2e-98 364.8 358 57.5
Zm00001eb175070 Zea mays HOM05D005604 ORTHO05D006745 3.5e-98 363.2 570 43.7
Os08g0528800 Oryza sativa ssp. japonica HOM05D005604 ORTHO05D006745 2.5e-96 357.1 553 43.0
CDE05G1628 Ceratophyllum demersum HOM05D005604 ORTHO05D006745 7.5e-85 318.9 309 55.3
CAN.G1432.2 Capsicum annuum HOM05D005604 ORTHO05D006745 4.0e-70 270.0 490 39.8
TPR.G6488 Trifolium pratense HOM05D005604 ORTHO05D006745 5.7e-69 266.2 314 54.5
SEGI_00167 Sequoiadendron giganteum HOM05D005604 ORTHO05D006745 2.7e-58 230.7 260 46.2
DCAR_026186 Daucus carota HOM05D005604 ORTHO05D006745 6.0e-42 176.4 456 32.9
Oeu057862.1 Olea europaea HOM05D005604 ORTHO05D006745 2.5e-24 117.9 80 71.2
ECA247G2712 Erigeron canadensis HOM05D005604 ORTHO05D006745 1.6e-23 115.2 163 47.2
Manes.12G047141 Manihot esculenta HOM05D005604 ORTHO05D006745 1.3e-20 105.5 87 64.4
Gohir.A05G304001 Gossypium hirsutum HOM05D005604 ORTHO05D006745 8.4e-20 102.8 116 51.7
Mapoly0029s0037 Marchantia polymorpha HOM05D005604 ORTHO05D006745 2.4e-19 101.3 220 32.7
TPR.G6487 Trifolium pratense HOM05D005604 ORTHO05D006745 9.3e-19 99.4 85 63.5
SMO117G0236 Selaginella moellendorffii HOM05D005604 ORTHO05D006745 2.7e-18 97.8 178 32.0
AagrBONN_evm.TU.Sc2ySwM_368.1401 Anthoceros agrestis HOM05D005604 ORTHO05D006745 6.0e-18 96.7 226 31.9
AagrBONN_evm.TU.Sc2ySwM_117.906 Anthoceros agrestis HOM05D005604 ORTHO05D006745 3.0e-17 94.4 217 31.8
AagrBONN_evm.TU.Sc2ySwM_362.1199 Anthoceros agrestis HOM05D005604 ORTHO05D006745 2.5e-16 91.3 193 34.7
Hma1.2p1_1324F.1_g275630 Hydrangea macrophylla HOM05D005604 ORTHO05D006745 7.4e-16 89.7 61 68.9
QL09p051399 Quercus lobata HOM05D005604 ORTHO05D006745 2.1e-07 61.6 61 60.7


User provided reference genes

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