Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3293 Papaver somniferum HOM05D003381 ORTHO05D003880 6.2e-40 167.2 94 100.0
PSO541G0132 Papaver somniferum HOM05D003381 ORTHO05D003880 1.3e-24 116.3 83 75.9
PSO675G1709 Papaver somniferum HOM05D003381 ORTHO05D003880 1.3e-24 116.3 91 72.5
TAR375G0964 Trochodendron aralioides HOM05D003381 ORTHO05D003880 9.7e-17 90.1 79 64.6
RcHm_v2.0_Chr1g0383321 Rosa chinensis HOM05D003381 ORTHO05D003880 1.6e-16 89.4 86 60.5
Sopen03g027490 Solanum pennellii HOM05D003381 ORTHO05D003880 2.2e-16 89.0 86 57.0
Prupe.2G322300 Prunus persica HOM05D003381 ORTHO05D003880 2.8e-16 88.6 86 58.1
FAN10G2693 Fragaria x ananassa HOM05D003381 ORTHO05D003880 3.7e-16 88.2 86 59.3
FAN10G4285 Fragaria x ananassa HOM05D003381 ORTHO05D003880 3.7e-16 88.2 86 59.3
TAR374G1397 Trochodendron aralioides HOM05D003381 ORTHO05D003880 3.7e-16 88.2 84 58.3
Aqoxy5G04393 Aquilegia oxysepala HOM05D003381 ORTHO05D003880 6.3e-16 87.4 87 58.6
Phvul.009G040500 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 6.3e-16 87.4 79 64.6
Solyc03g096760.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 6.3e-16 87.4 86 55.8
FAN03G2343 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.1e-15 86.7 86 58.1
Lalb_Chr08g0239391 Lupinus albus HOM05D003381 ORTHO05D003880 1.1e-15 86.7 79 63.3
Nitab4.5_0007121g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 1.1e-15 86.7 86 53.5
Lj1g0021256 Lotus japonicus HOM05D003381 ORTHO05D003880 1.4e-15 86.3 87 58.6
PGSC0003DMG400027025 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.4e-15 86.3 88 54.5
CAN.G303.61 Capsicum annuum HOM05D003381 ORTHO05D003880 2.4e-15 85.5 89 51.7
CAN.G303.62 Capsicum annuum HOM05D003381 ORTHO05D003880 2.4e-15 85.5 82 57.3
Cc02_g00580 Coffea canephora HOM05D003381 ORTHO05D003880 2.4e-15 85.5 85 55.3
HanXRQChr08g0225861 Helianthus annuus HOM05D003381 ORTHO05D003880 2.4e-15 85.5 90 50.0
EL10Ac3g05129 Beta vulgaris HOM05D003381 ORTHO05D003880 6.9e-15 84.0 85 56.5
CSS0005275 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 6.9e-15 84.0 79 60.8
Peaxi162Scf00007g00254 Petunia axillaris HOM05D003381 ORTHO05D003880 6.9e-15 84.0 86 50.0
SalBow4G2332 Salvia bowleyana HOM05D003381 ORTHO05D003880 6.9e-15 84.0 80 60.0
Hma1.2p1_0115F.1_g055840 Hydrangea macrophylla HOM05D003381 ORTHO05D003880 9.0e-15 83.6 86 54.7
Lalb_Chr11g0067571 Lupinus albus HOM05D003381 ORTHO05D003880 9.0e-15 83.6 79 59.5
Migut.F00121 Erythranthe guttata HOM05D003381 ORTHO05D003880 1.5e-14 82.8 84 57.1
Sopen06g029340 Solanum pennellii HOM05D003381 ORTHO05D003880 2.0e-14 82.4 85 55.3
MSTRG.26951 Avicennia marina HOM05D003381 ORTHO05D003880 3.4e-14 81.6 83 56.6
Dinv17275 Davidia involucrata HOM05D003381 ORTHO05D003880 3.4e-14 81.6 85 52.9
Glyma.14G188300 Glycine max HOM05D003381 ORTHO05D003880 3.4e-14 81.6 79 60.8
Ciclev10022951m.g Citrus clementina HOM05D003381 ORTHO05D003880 7.7e-14 80.5 84 53.6
DCAR_010556 Daucus carota HOM05D003381 ORTHO05D003880 1.0e-13 80.1 81 56.8
Atru.chr12.2499 Acer truncatum HOM05D003381 ORTHO05D003880 1.7e-13 79.3 83 56.6
Atru.chr12.2523 Acer truncatum HOM05D003381 ORTHO05D003880 1.7e-13 79.3 83 56.6
AUR62005946 Chenopodium quinoa HOM05D003381 ORTHO05D003880 1.7e-13 79.3 81 53.1
Ca_16840_v3 Cicer arietinum L. HOM05D003381 ORTHO05D003880 1.7e-13 79.3 79 59.5
Migut.F00967 Erythranthe guttata HOM05D003381 ORTHO05D003880 1.7e-13 79.3 85 57.6
CANSAT21G1431 Cannabis sativa HOM05D003381 ORTHO05D003880 2.2e-13 79.0 80 57.5
unitig_60.g25635 Utricularia gibba HOM05D003381 ORTHO05D003880 2.2e-13 79.0 84 51.2
Lalb_Chr04g0252571 Lupinus albus HOM05D003381 ORTHO05D003880 2.9e-13 78.6 79 58.2
TPR.G35911 Trifolium pratense HOM05D003381 ORTHO05D003880 2.9e-13 78.6 79 58.2
Phvul.008G187900 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 3.8e-13 78.2 79 58.2
Sc14g0006700 Simmondsia chinensis HOM05D003381 ORTHO05D003880 5.0e-13 77.8 83 56.6
Dinv29190 Davidia involucrata HOM05D003381 ORTHO05D003880 6.5e-13 77.4 82 52.4
Potri.012G004500 Populus trichocarpa HOM05D003381 ORTHO05D003880 6.5e-13 77.4 85 51.8
AUR62005945 Chenopodium quinoa HOM05D003381 ORTHO05D003880 8.5e-13 77.0 92 50.0
ClCG01G000030 Citrullus lanatus HOM05D003381 ORTHO05D003880 8.5e-13 77.0 84 57.1
MD07G1303600 Malus domestica HOM05D003381 ORTHO05D003880 8.5e-13 77.0 85 54.1
ATR0579G061 Amborella trichopoda HOM05D003381 ORTHO05D003880 1.1e-12 76.6 84 50.0
CANSAT21G0934 Cannabis sativa HOM05D003381 ORTHO05D003880 1.1e-12 76.6 89 51.7
HanXRQChr08g0225881 Helianthus annuus HOM05D003381 ORTHO05D003880 1.1e-12 76.6 90 46.7
Migut.F00966 Erythranthe guttata HOM05D003381 ORTHO05D003880 1.4e-12 76.3 79 57.0
LjContig00155g0019595 Lotus japonicus HOM05D003381 ORTHO05D003880 2.5e-12 75.5 79 54.4
Ah.13g071070 Amaranthus hybridus HOM05D003381 ORTHO05D003880 3.2e-12 75.1 88 47.7
Sopen03g027520 Solanum pennellii HOM05D003381 ORTHO05D003880 3.2e-12 75.1 86 48.8
Migut.F00119 Erythranthe guttata HOM05D003381 ORTHO05D003880 4.2e-12 74.7 77 51.9
HanXRQChr16g0499781 Helianthus annuus HOM05D003381 ORTHO05D003880 4.2e-12 74.7 80 50.0
FvH4_7g33340 Fragaria vesca HOM05D003381 ORTHO05D003880 5.5e-12 74.3 86 53.5
Solyc03g096780.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 5.5e-12 74.3 86 48.8
SGA_v2.0_scaffold44G16873 Striga asiatica HOM05D003381 ORTHO05D003880 5.5e-12 74.3 89 49.4
Manes.01G002300 Manihot esculenta HOM05D003381 ORTHO05D003880 7.2e-12 73.9 84 53.6
Sabra12G0000400 Salix brachista HOM05D003381 ORTHO05D003880 7.2e-12 73.9 85 49.4
HPP92_008910 Vanilla planifolia HOM05D003381 ORTHO05D003880 7.2e-12 73.9 85 47.1
Medtr3g093400 Medicago truncatula HOM05D003381 ORTHO05D003880 9.4e-12 73.6 81 54.3
Sabra15G0000300 Salix brachista HOM05D003381 ORTHO05D003880 9.4e-12 73.6 86 48.8
PGSC0003DMG400000547 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.2e-11 73.2 86 50.0
Ah.13g071060 Amaranthus hybridus HOM05D003381 ORTHO05D003880 2.1e-11 72.4 78 51.3
Psat5g070520 Pisum sativum HOM05D003381 ORTHO05D003880 2.1e-11 72.4 79 57.0
Cpa.g.sc3.189 Carica papaya HOM05D003381 ORTHO05D003880 2.7e-11 72.0 78 55.1
HanXRQChr08g0225771 Helianthus annuus HOM05D003381 ORTHO05D003880 2.7e-11 72.0 85 47.1
HanXRQChr08g0225851 Helianthus annuus HOM05D003381 ORTHO05D003880 2.7e-11 72.0 85 47.1
MD01G1231600 Malus domestica HOM05D003381 ORTHO05D003880 3.6e-11 71.6 85 51.8
Nitab4.5_0000115g0190 Nicotiana tabacum HOM05D003381 ORTHO05D003880 3.6e-11 71.6 86 50.0
Psat5g070560 Pisum sativum HOM05D003381 ORTHO05D003880 3.6e-11 71.6 79 53.2
Sed0013785 Sechium edule HOM05D003381 ORTHO05D003880 3.6e-11 71.6 88 48.9
Peaxi162Scf00815g00116 Petunia axillaris HOM05D003381 ORTHO05D003880 6.1e-11 70.9 86 51.2
Sopen03g027500 Solanum pennellii HOM05D003381 ORTHO05D003880 6.1e-11 70.9 86 47.7
Lalb_Chr10g0102971 Lupinus albus HOM05D003381 ORTHO05D003880 1.0e-10 70.1 90 48.9
MBI04_g09823_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 1.0e-10 70.1 82 54.9
Nitab4.5_0002691g0070 Nicotiana tabacum HOM05D003381 ORTHO05D003880 1.0e-10 70.1 86 48.8
PGSC0003DMG400000545 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.0e-10 70.1 86 46.5
AUR62028119 Chenopodium quinoa HOM05D003381 ORTHO05D003880 1.4e-10 69.7 84 48.8
ECA233G1855 Erigeron canadensis HOM05D003381 ORTHO05D003880 1.4e-10 69.7 85 48.2
Actinidia34289 Actinidia chinensis HOM05D003381 ORTHO05D003880 2.3e-10 68.9 82 50.0
Potri.015G000500 Populus trichocarpa HOM05D003381 ORTHO05D003880 2.3e-10 68.9 86 46.5
Nitab4.5_0002691g0080 Nicotiana tabacum HOM05D003381 ORTHO05D003880 3.0e-10 68.6 86 47.7
Nitab4.5_0002867g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 3.9e-10 68.2 87 49.4
Oeu063749.1 Olea europaea HOM05D003381 ORTHO05D003880 3.9e-10 68.2 86 45.3
EL10Ac3g05128 Beta vulgaris HOM05D003381 ORTHO05D003880 5.1e-10 67.8 86 45.3
SGA_v2.0_scaffold351G49675 Striga asiatica HOM05D003381 ORTHO05D003880 5.1e-10 67.8 82 47.6
CSS0002942 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 6.7e-10 67.4 82 48.8
CsaV3_5G000160 Cucumis sativus L. HOM05D003381 ORTHO05D003880 6.7e-10 67.4 80 53.8
Glyma.04G225500 Glycine max HOM05D003381 ORTHO05D003880 6.7e-10 67.4 79 53.2
Solyc03g096770.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 6.7e-10 67.4 86 47.7
Eucgr.K00481 Eucalyptus grandis HOM05D003381 ORTHO05D003880 8.8e-10 67.0 85 48.2
TWI81G0192 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 1.1e-09 66.6 75 53.3
Oeu017357.1 Olea europaea HOM05D003381 ORTHO05D003880 1.5e-09 66.2 87 47.1
TWI81G0266 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 1.5e-09 66.2 75 53.3
VMungo1309G1451 Vigna mungo HOM05D003381 ORTHO05D003880 1.5e-09 66.2 79 54.4
Glyma.06G139300 Glycine max HOM05D003381 ORTHO05D003880 2.0e-09 65.9 79 53.2
PGSC0003DMG400000546 Solanum tuberosum HOM05D003381 ORTHO05D003880 2.0e-09 65.9 86 45.3
Gohir.A08G106800 Gossypium hirsutum HOM05D003381 ORTHO05D003880 3.3e-09 65.1 90 46.7
SalBow4G1643 Salvia bowleyana HOM05D003381 ORTHO05D003880 3.3e-09 65.1 72 50.0
Gohir.D08G117900 Gossypium hirsutum HOM05D003381 ORTHO05D003880 4.3e-09 64.7 90 46.7
Nn3g18090 Nelumbo nucifera HOM05D003381 ORTHO05D003880 4.3e-09 64.7 80 52.5
SEGI_37007 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 4.3e-09 64.7 81 42.0
ECA232G1694 Erigeron canadensis HOM05D003381 ORTHO05D003880 7.4e-09 63.9 66 51.5
Gorai.004G126500 Gossypium raimondii HOM05D003381 ORTHO05D003880 1.3e-08 63.2 90 45.6
Oeu055427.1 Olea europaea HOM05D003381 ORTHO05D003880 1.3e-08 63.2 59 55.9
Solyc06g072990.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.3e-08 63.2 85 44.7
Zm00001eb220550 Zea mays HOM05D003381 ORTHO05D003880 1.3e-08 63.2 80 42.5
CAN.G65.142 Capsicum annuum HOM05D003381 ORTHO05D003880 2.2e-08 62.4 59 57.6
Gohir.A08G106600 Gossypium hirsutum HOM05D003381 ORTHO05D003880 2.8e-08 62.0 90 43.3
Haze_00337 Corylus avellana HOM05D003381 ORTHO05D003880 3.7e-08 61.6 75 50.7
PGR142G3642 Punica granatum HOM05D003381 ORTHO05D003880 6.3e-08 60.8 79 48.1
COL.COLO4_14401 Corchorus olitorius HOM05D003381 ORTHO05D003880 8.2e-08 60.5 80 50.0
Zm00001eb043810 Zea mays HOM05D003381 ORTHO05D003880 8.2e-08 60.5 80 41.2
SEGI_09109 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 1.1e-07 60.1 81 43.2
CDE04G0378 Ceratophyllum demersum HOM05D003381 ORTHO05D003880 1.4e-07 59.7 58 55.2
Gohir.D08G117850 Gossypium hirsutum HOM05D003381 ORTHO05D003880 1.4e-07 59.7 90 43.3
Gorai.004G126400 Gossypium raimondii HOM05D003381 ORTHO05D003880 1.4e-07 59.7 90 43.3
Peaxi162Scf00685g10014 Petunia axillaris HOM05D003381 ORTHO05D003880 5.3e-07 57.8 59 49.2
CDE09G1369 Ceratophyllum demersum HOM05D001765 ORTHO05D003527 9.1e-07 57.0 82 43.9
COL.COLO4_14402 Corchorus olitorius HOM05D003381 ORTHO05D003880 9.1e-07 57.0 54 53.7
Eucgr.K00482 Eucalyptus grandis HOM05D003381 ORTHO05D003880 1.2e-06 56.6 85 44.7
Eucgr.K00530 Eucalyptus grandis HOM05D003381 ORTHO05D003880 1.2e-06 56.6 85 44.7
SEGI_32370 Sequoiadendron giganteum HOM05D003381 ORTHO05D003880 1.2e-06 56.6 81 40.7
Duzib084G1005 Durio zibethinus HOM05D003381 ORTHO05D003880 1.5e-06 56.2 84 42.9
Lsat_1_v5_gn_2_3421 Lactuca sativa HOM05D003381 ORTHO05D003880 1.5e-06 56.2 89 38.2
Lsat_1_v5_gn_8_4301 Lactuca sativa HOM05D003381 ORTHO05D003880 1.5e-06 56.2 92 41.3
Peaxi162Scf00542g00013 Petunia axillaris HOM05D003381 ORTHO05D003880 2.6e-06 55.5 57 57.9
A06p18190 Brassica napus HOM05D003381 ORTHO05D003880 5.9e-06 54.3 82 41.5
BraA06t24903Z Brassica rapa HOM05D003381 ORTHO05D003880 5.9e-06 54.3 82 41.5
BolC8t50073H Brassica oleracea HOM05D003381 ORTHO05D003880 7.7e-06 53.9 82 41.5


User provided reference genes

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