Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 3.0e-104 382.1 228 100.0
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 1.2e-97 360.1 207 93.7
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 5.4e-37 158.7 209 46.9
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 1.2e-36 157.5 205 46.8
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 1.7e-35 153.7 203 45.8
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 3.8e-35 152.5 206 48.5
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 6.6e-35 151.8 196 49.0
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 3.3e-34 149.4 217 44.7
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 5.5e-34 148.7 211 45.0
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 5.5e-34 148.7 211 45.0
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 1.2e-33 147.5 215 46.0
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 2.8e-33 146.4 211 44.1
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 6.1e-33 145.2 185 47.0
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 2.3e-32 143.3 203 45.8
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 3.0e-32 142.9 208 46.2
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 3.0e-32 142.9 176 48.9
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 4.0e-32 142.5 208 43.3
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 5.2e-32 142.1 176 48.9
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 8.9e-32 141.4 203 46.3
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.2e-31 141.0 176 47.2
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 1.5e-31 140.6 219 43.8
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 3.4e-31 139.4 176 48.3
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 7.5e-31 138.3 185 44.9
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 9.8e-31 137.9 174 46.0
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.3e-30 137.5 201 45.3
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.7e-30 137.1 203 44.8
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 2.9e-30 136.3 207 43.5
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 2.9e-30 136.3 224 37.5
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 2.9e-30 136.3 207 44.4
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 8.3e-30 134.8 210 41.0
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 1.1e-29 134.4 252 39.7
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.4e-29 134.0 179 45.8
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.8e-29 133.7 149 49.7
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 2.4e-29 133.3 201 46.3
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 4.1e-29 132.5 183 41.5
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 7.0e-29 131.7 179 44.7
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 9.2e-29 131.3 210 42.9
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 9.2e-29 131.3 203 43.8
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 2.0e-28 130.2 204 43.1
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 2.0e-28 130.2 200 42.0
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 4.6e-28 129.0 154 46.8
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 4.6e-28 129.0 209 44.5
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 4.6e-28 129.0 204 45.1
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 4.6e-28 129.0 233 41.2
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 5.9e-28 128.6 180 45.0
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.0e-27 127.9 154 46.8
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 1.0e-27 127.9 213 41.3
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 1.7e-27 127.1 195 43.1
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 2.3e-27 126.7 202 42.1
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 2.3e-27 126.7 210 40.5
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 5.0e-27 125.6 203 43.3
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 5.0e-27 125.6 202 41.6
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 5.0e-27 125.6 188 43.6
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 6.6e-27 125.2 204 40.7
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 1.1e-26 124.4 209 45.0
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 1.1e-26 124.4 181 44.2
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 2.5e-26 123.2 185 43.8
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 7.3e-26 121.7 199 41.2
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 9.5e-26 121.3 205 42.0
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 9.5e-26 121.3 213 40.8
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 2.1e-25 120.2 147 49.0
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 2.1e-25 120.2 194 41.2
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 2.8e-25 119.8 202 40.6
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 8.0e-25 118.2 173 45.1
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 8.0e-25 118.2 206 39.3
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 1.4e-24 117.5 197 38.6
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 1.8e-24 117.1 213 40.4
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 6.8e-24 115.2 200 41.0
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 8.9e-24 114.8 188 41.0
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 1.2e-23 114.4 214 38.8
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 2.6e-23 113.2 197 39.1
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 9.8e-23 111.3 208 38.0
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 1.3e-22 110.9 191 40.8
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 1.3e-22 110.9 191 40.8
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 1.7e-22 110.5 207 40.1
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 2.2e-22 110.2 181 42.0
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 2.2e-22 110.2 193 38.9
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 2.9e-22 109.8 198 37.9
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 6.4e-22 108.6 202 41.1
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 6.4e-22 108.6 197 38.1
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 8.3e-22 108.2 248 35.5
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 1.9e-21 107.1 198 39.4
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 4.1e-21 105.9 181 42.0
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 4.1e-21 105.9 195 43.1
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 5.4e-21 105.5 198 38.9
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.6e-20 104.0 204 39.2
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 2.0e-20 103.6 225 36.0
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 2.7e-20 103.2 210 36.7
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 7.8e-20 101.7 182 41.8
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 1.0e-19 101.3 201 38.8
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 2.3e-19 100.1 198 36.9
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 2.3e-19 100.1 147 42.2
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 2.3e-19 100.1 146 43.8
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.9e-19 99.4 93 52.7
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 5.0e-19 99.0 147 42.9
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 1.1e-18 97.8 141 44.7
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 1.1e-18 97.8 213 37.1
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 1.1e-18 97.8 196 37.2
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 1.5e-18 97.4 141 44.7
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 1.9e-18 97.1 218 34.9
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.9e-18 97.1 147 42.2
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 2.8e-17 93.2 146 41.1
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 2.8e-17 93.2 209 34.9
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 1.1e-16 91.3 78 52.6
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 1.8e-16 90.5 209 34.4
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 8.9e-16 88.2 160 39.4
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 1.2e-15 87.8 193 32.6
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 1.2e-15 87.8 209 35.4
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.6e-15 86.7 160 39.4
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 7.5e-15 85.1 207 32.9
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 2.9e-14 83.2 167 37.1
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 4.9e-14 82.4 205 33.7
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 1.1e-13 81.3 217 34.6
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 4.6e-12 75.9 210 30.5
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 6.0e-12 75.5 61 54.1
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 6.0e-12 75.5 149 40.9
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 6.0e-12 75.5 197 31.5
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 6.6e-11 72.0 147 34.7
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 6.6e-11 72.0 146 39.0
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 1.6e-09 67.4 173 35.3
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 1.4e-08 64.3 164 31.7
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 2.3e-08 63.5 191 30.9
CARHR278660 Cardamine hirsuta HOM05D005900 ORTHO05D007306 3.7e-06 56.2 128 41.4


User provided reference genes

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