Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3211 Papaver somniferum HOM05D003361 ORTHO05D003760 1.5e-107 394.4 585 100.0
PSO170G6803 Papaver somniferum HOM05D003361 ORTHO05D003760 1.1e-91 341.7 611 82.7
TAR383G0111 Trochodendron aralioides HOM05D003361 ORTHO05D003760 2.3e-52 211.1 316 73.1
AUR62011226 Chenopodium quinoa HOM05D003361 ORTHO05D003760 1.1e-49 202.2 231 65.4
TAR626G1829 Trochodendron aralioides HOM05D003361 ORTHO05D003760 4.1e-49 200.3 231 64.5
AUR62020008 Chenopodium quinoa HOM05D003361 ORTHO05D003760 1.2e-48 198.7 231 64.5
Dinv41445 Davidia involucrata HOM05D003361 ORTHO05D003760 1.6e-48 198.4 316 73.1
Manes.11G061100 Manihot esculenta HOM05D003361 ORTHO05D003760 4.6e-48 196.8 179 62.0
Haze_16605 Corylus avellana HOM05D003361 ORTHO05D003760 7.8e-48 196.1 179 60.9
Aqoxy7G02456 Aquilegia oxysepala HOM05D003361 ORTHO05D003760 1.0e-47 195.7 313 73.5
Oeu029903.1 Olea europaea HOM05D003361 ORTHO05D003760 1.0e-47 195.7 231 68.4
CiPaw.02G158600 Carya illinoinensis HOM05D003361 ORTHO05D003760 1.7e-47 194.9 231 68.4
Dinv36449 Davidia involucrata HOM05D003361 ORTHO05D003760 1.7e-47 194.9 231 68.0
Lj9A497T71 Lonicera japonica HOM05D003361 ORTHO05D003760 3.9e-47 193.7 231 68.0
Manes.04G108700 Manihot esculenta HOM05D003361 ORTHO05D003760 1.5e-46 191.8 179 60.3
Hund21595 Selenicereus undatus HOM05D003361 ORTHO05D003760 1.9e-46 191.4 231 66.2
Cc04_g04660 Coffea canephora HOM05D003361 ORTHO05D003760 3.3e-46 190.7 231 66.7
Actinidia15974 Actinidia chinensis HOM05D003361 ORTHO05D003760 9.5e-46 189.1 231 66.7
CSS0014218 Camellia sinensis var. sinensis HOM05D003361 ORTHO05D003760 9.5e-46 189.1 231 66.7
CiPaw.01G250600 Carya illinoinensis HOM05D003361 ORTHO05D003760 1.2e-45 188.7 231 66.7
QL05p032608 Quercus lobata HOM05D003361 ORTHO05D003760 1.6e-45 188.3 231 66.2
TWI75G0489 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 2.1e-45 188.0 176 59.7
EL10Ac8g18785 Beta vulgaris HOM05D003361 ORTHO05D003760 2.8e-45 187.6 231 64.9
Sc08g0006030 Simmondsia chinensis HOM05D003361 ORTHO05D003760 3.6e-45 187.2 231 64.5
Dinv30637 Davidia involucrata HOM05D003361 ORTHO05D003760 4.7e-45 186.8 231 67.1
Prupe.3G092900 Prunus persica HOM05D003361 ORTHO05D003760 6.2e-45 186.4 179 58.7
Solyc03g117420.4 Solanum lycopersicum HOM05D003361 ORTHO05D003760 6.2e-45 186.4 231 64.5
Gohir.A08G090300 Gossypium hirsutum HOM05D003361 ORTHO05D003760 8.0e-45 186.0 231 65.4
Peaxi162Scf00332g00127 Petunia axillaris HOM05D003361 ORTHO05D003760 1.1e-44 185.7 177 58.2
Sopen03g036300 Solanum pennellii HOM05D003361 ORTHO05D003760 1.1e-44 185.7 231 64.1
SalBow7G0810 Salvia bowleyana HOM05D003361 ORTHO05D003760 2.3e-44 184.5 231 64.5
SalBow7G3482 Salvia bowleyana HOM05D003361 ORTHO05D003760 2.3e-44 184.5 231 64.5
TWI12G0888 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 2.3e-44 184.5 176 59.1
PGR031G1162 Punica granatum HOM05D003361 ORTHO05D003760 3.1e-44 184.1 178 57.3
Hund00496 Selenicereus undatus HOM05D003361 ORTHO05D003760 3.1e-44 184.1 231 64.1
Ciclev10025249m.g Citrus clementina HOM05D003361 ORTHO05D003760 4.0e-44 183.7 179 58.7
ECA246G4877 Erigeron canadensis HOM05D003361 ORTHO05D003760 4.0e-44 183.7 229 65.1
Hma1.2p1_0461F.1_g157700 Hydrangea macrophylla HOM05D003361 ORTHO05D003760 4.0e-44 183.7 179 59.2
GSVIVG01012857001 Vitis vinifera HOM05D003361 ORTHO05D003760 4.0e-44 183.7 231 66.7
COL.COLO4_11855 Corchorus olitorius HOM05D003361 ORTHO05D003760 5.2e-44 183.3 231 63.6
HanXRQChr17g0570311 Helianthus annuus HOM05D003361 ORTHO05D003760 5.2e-44 183.3 313 68.7
Lsat_1_v5_gn_5_8861 Lactuca sativa HOM05D003361 ORTHO05D003760 6.8e-44 183.0 176 57.4
GSVIVG01017472001 Vitis vinifera HOM05D003361 ORTHO05D003760 8.9e-44 182.6 231 66.7
Nitab4.5_0002322g0060 Nicotiana tabacum HOM05D003361 ORTHO05D003760 1.2e-43 182.2 179 56.4
Gohir.D08G101300 Gossypium hirsutum HOM05D003361 ORTHO05D003760 1.5e-43 181.8 231 64.5
Gorai.004G109300 Gossypium raimondii HOM05D003361 ORTHO05D003760 1.5e-43 181.8 231 64.5
MD02G1018400 Malus domestica HOM05D003361 ORTHO05D003760 1.5e-43 181.8 228 66.7
Atru.chr1.2849 Acer truncatum HOM05D003361 ORTHO05D003760 2.0e-43 181.4 231 65.4
Migut.I00738 Erythranthe guttata HOM05D003361 ORTHO05D003760 2.6e-43 181.0 177 57.1
Thecc.09G137400 Theobroma cacao HOM05D003361 ORTHO05D003760 2.6e-43 181.0 231 64.1
COL.COLO4_33367 Corchorus olitorius HOM05D003361 ORTHO05D003760 3.4e-43 180.6 231 64.9
MD15G1162400 Malus domestica HOM05D003361 ORTHO05D003760 3.4e-43 180.6 179 57.5
Nn8g39646 Nelumbo nucifera HOM05D003361 ORTHO05D003760 3.4e-43 180.6 314 72.0
Carub.0001s1551 Capsella rubella HOM05D003361 ORTHO05D003760 4.4e-43 180.3 228 63.6
Thecc.06G033100 Theobroma cacao HOM05D003361 ORTHO05D003760 4.4e-43 180.3 231 64.1
Rhsim12G0189300 Rhododendron simsii HOM05D003361 ORTHO05D003760 7.5e-43 179.5 176 56.2
CAN.G407.25 Capsicum annuum HOM05D003361 ORTHO05D003760 9.8e-43 179.1 231 63.2
Nitab4.5_0001017g0020 Nicotiana tabacum HOM05D003361 ORTHO05D003760 9.8e-43 179.1 314 69.1
CsaV3_7G032160 Cucumis sativus L. HOM05D003361 ORTHO05D003760 1.3e-42 178.7 231 44.2
Duzib235G0043 Durio zibethinus HOM05D003361 ORTHO05D003760 1.7e-42 178.3 178 55.1
Aa31LG7G360 Aethionema arabicum HOM05D003361 ORTHO05D003760 2.2e-42 177.9 228 64.5
MELO3C023445.2 Cucumis melo HOM05D003361 ORTHO05D003760 2.2e-42 177.9 231 44.2
Prupe.7G252400 Prunus persica HOM05D003361 ORTHO05D003760 3.7e-42 177.2 176 56.8
Thhalv10007169m.g Eutrema salsugineum HOM05D003361 ORTHO05D003760 8.3e-42 176.0 231 62.8
vmacro16874 Vaccinium macrocarpon HOM05D003361 ORTHO05D003760 8.3e-42 176.0 170 57.1
MBI14_g24987_MAGBIO Magnolia biondii HOM05D003361 ORTHO05D003760 1.1e-41 175.6 231 66.2
RcHm_v2.0_Chr2g0134401 Rosa chinensis HOM05D003361 ORTHO05D003760 1.1e-41 175.6 231 63.2
Atru.chr7.2012 Acer truncatum HOM05D003361 ORTHO05D003760 1.4e-41 175.3 231 64.5
arahy.Tifrunner.gnm1.ann1.NFA80P Arachis hypogaea HOM05D003361 ORTHO05D003760 1.4e-41 175.3 228 66.2
BraA06t24343Z Brassica rapa HOM05D003361 ORTHO05D003760 1.4e-41 175.3 231 62.8
BcaC05g25516 Brassica carinata HOM05D003361 ORTHO05D003760 1.9e-41 174.9 228 63.2
Nn2g12188 Nelumbo nucifera HOM05D003361 ORTHO05D003760 1.9e-41 174.9 173 58.4
Sp1g14030 Schrenkiella parvula HOM05D003361 ORTHO05D003760 1.9e-41 174.9 231 62.8
A06p11730 Brassica napus HOM05D003361 ORTHO05D003760 2.4e-41 174.5 231 62.8
FAN09G2631 Fragaria x ananassa HOM05D003361 ORTHO05D003760 3.2e-41 174.1 231 62.8
SGA_v2.0_scaffold37G14747 Striga asiatica HOM05D003361 ORTHO05D003760 3.2e-41 174.1 181 56.4
C05p13880 Brassica napus HOM05D003361 ORTHO05D003760 4.1e-41 173.7 231 63.2
BolC5t30122H Brassica oleracea HOM05D003361 ORTHO05D003760 4.1e-41 173.7 231 63.2
Duzib160G0541 Durio zibethinus HOM05D003361 ORTHO05D003760 4.1e-41 173.7 178 54.5
FvH4_6g29180 Fragaria vesca HOM05D003361 ORTHO05D003760 4.1e-41 173.7 231 62.8
FAN05G3872 Fragaria x ananassa HOM05D003361 ORTHO05D003760 4.1e-41 173.7 231 62.8
FAN28G0525 Fragaria x ananassa HOM05D003361 ORTHO05D003760 4.1e-41 173.7 180 53.3
CARHR016230 Cardamine hirsuta HOM05D003361 ORTHO05D003760 5.4e-41 173.3 228 63.2
AL1G27850 Arabidopsis lyrata HOM05D003361 ORTHO05D003760 7.1e-41 172.9 228 63.2
Cpa.g.sc46.67 Carica papaya HOM05D003361 ORTHO05D003760 7.1e-41 172.9 231 64.1
Lj4g0018391 Lotus japonicus HOM05D003361 ORTHO05D003760 7.1e-41 172.9 231 62.3
CANSAT11G0288 Cannabis sativa HOM05D003361 ORTHO05D003760 9.2e-41 172.6 228 44.3
Ca_12515_v3 Cicer arietinum L. HOM05D003361 ORTHO05D003760 9.2e-41 172.6 231 63.6
ClCG09G003110 Citrullus lanatus HOM05D003361 ORTHO05D003760 9.2e-41 172.6 228 51.3
FAN14G3167 Fragaria x ananassa HOM05D003361 ORTHO05D003760 9.2e-41 172.6 231 62.3
Psat7g257800 Pisum sativum HOM05D003361 ORTHO05D003760 9.2e-41 172.6 231 62.3
THA.LOC104808198 Tarenaya hassleriana HOM05D003361 ORTHO05D003760 9.2e-41 172.6 228 61.8
FvH4_1g02020 Fragaria vesca HOM05D003361 ORTHO05D003760 1.6e-40 171.8 181 52.5
Lj3g0011414 Lotus japonicus HOM05D003361 ORTHO05D003760 1.6e-40 171.8 176 58.5
RcHm_v2.0_Chr2g0087081 Rosa chinensis HOM05D003361 ORTHO05D003760 2.1e-40 171.4 231 61.9
arahy.Tifrunner.gnm1.ann1.JM4LQW Arachis hypogaea HOM05D003361 ORTHO05D003760 2.7e-40 171.0 228 65.4
MSTRG.11160 Avicennia marina HOM05D003361 ORTHO05D003760 2.7e-40 171.0 178 55.1
FAN02G1685 Fragaria x ananassa HOM05D003361 ORTHO05D003760 2.7e-40 171.0 178 55.6
MSTRG.22764 Avicennia marina HOM05D003361 ORTHO05D003760 3.5e-40 170.6 231 61.9
FAN19G1251 Fragaria x ananassa HOM05D002026 ORTHO05D002291 3.5e-40 170.6 153 56.2
Eucgr.J03087 Eucalyptus grandis HOM05D003361 ORTHO05D003760 6.0e-40 169.9 175 53.7
TWI32G1011 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 6.0e-40 169.9 231 61.0
Ah.09g224100 Amaranthus hybridus HOM05D003361 ORTHO05D003760 7.8e-40 169.5 231 61.9
arahy.Tifrunner.gnm1.ann1.MWAB5B Arachis hypogaea HOM05D003361 ORTHO05D003760 7.8e-40 169.5 175 56.6
Gohir.D10G079000 Gossypium hirsutum HOM05D003361 ORTHO05D003760 1.0e-39 169.1 231 62.3
Gorai.011G085800 Gossypium raimondii HOM05D003361 ORTHO05D003760 1.0e-39 169.1 231 62.3
THA.LOC104812464 Tarenaya hassleriana HOM05D003361 ORTHO05D003760 1.0e-39 169.1 175 55.4
Glyma.07G028300 Glycine max HOM05D003361 ORTHO05D003760 1.3e-39 168.7 228 64.0
Lalb_Chr01g0012261 Lupinus albus HOM05D003361 ORTHO05D003760 1.3e-39 168.7 228 65.4
Gohir.A10G072100 Gossypium hirsutum HOM05D003361 ORTHO05D003760 1.7e-39 168.3 231 62.3
AT1G15740 Arabidopsis thaliana HOM05D003361 ORTHO05D003760 2.3e-39 167.9 176 55.1
DCAR_025527 Daucus carota HOM05D003361 ORTHO05D003760 2.3e-39 167.9 231 44.6
Glyma.08G214500 Glycine max HOM05D003361 ORTHO05D003760 3.0e-39 167.5 228 64.5
CANSAT56G3261 Cannabis sativa HOM05D003361 ORTHO05D003760 1.5e-38 165.2 231 63.2
TPR.G38632 Trifolium pratense HOM05D003361 ORTHO05D003760 2.5e-38 164.5 176 52.8
Manes.14G119228 Manihot esculenta HOM05D003361 ORTHO05D003760 3.3e-38 164.1 178 53.4
Sabra06G0044400 Salix brachista HOM05D003361 ORTHO05D003760 3.3e-38 164.1 231 61.0
Sed0016861 Sechium edule HOM05D003361 ORTHO05D003760 3.3e-38 164.1 231 54.5
Potri.006G061700 Populus trichocarpa HOM05D003361 ORTHO05D003760 4.3e-38 163.7 231 61.5
Lalb_Chr12g0198401 Lupinus albus HOM05D003361 ORTHO05D003760 7.3e-38 162.9 231 51.9
QL02p090717 Quercus lobata HOM05D003361 ORTHO05D003760 7.3e-38 162.9 179 53.6
Phvul.010G157600 Phaseolus vulgaris HOM05D003361 ORTHO05D003760 9.5e-38 162.5 228 63.2
ATR0767G175 Amborella trichopoda HOM05D003361 ORTHO05D003760 1.2e-37 162.2 232 62.1
HPP92_017331 Vanilla planifolia HOM05D003361 ORTHO05D003760 1.6e-37 161.8 176 51.1
Glyma.13G163500 Glycine max HOM05D003361 ORTHO05D003760 6.2e-37 159.8 231 59.7
Medtr4g116170 Medicago truncatula HOM05D003361 ORTHO05D003760 6.2e-37 159.8 231 59.7
Nitab4.5_0002286g0090 Nicotiana tabacum HOM05D003361 ORTHO05D003760 6.2e-37 159.8 176 48.9
Glyma.17G107400 Glycine max HOM05D003361 ORTHO05D003760 1.1e-36 159.1 231 60.6
CDE05G0968 Ceratophyllum demersum HOM05D003361 ORTHO05D003760 1.4e-36 158.7 176 52.8
Medtr4g009873 Medicago truncatula HOM05D003361 ORTHO05D003760 1.8e-36 158.3 174 52.3
Psat0s571g0080 Pisum sativum HOM05D003361 ORTHO05D003760 2.3e-36 157.9 231 58.9
TPR.G7990 Trifolium pratense HOM05D003361 ORTHO05D003760 3.1e-36 157.5 232 49.6
CAN.G1281.4 Capsicum annuum HOM05D003361 ORTHO05D003760 1.5e-35 155.2 176 48.3
VMungo0331G0010 Vigna mungo HOM05D003361 ORTHO05D003760 4.4e-35 153.7 214 64.5
Sopen07g003470 Solanum pennellii HOM05D003361 ORTHO05D003760 5.8e-35 153.3 176 48.3
Solyc07g007420.3 Solanum lycopersicum HOM05D003361 ORTHO05D003760 9.9e-35 152.5 176 48.3
arahy.Tifrunner.gnm1.ann1.H7Z4S8 Arachis hypogaea HOM05D003361 ORTHO05D003760 1.3e-34 152.1 231 58.0
arahy.Tifrunner.gnm1.ann1.T3C7Q8 Arachis hypogaea HOM05D003361 ORTHO05D003760 1.3e-34 152.1 231 50.2
Ca_21637_v3 Cicer arietinum L. HOM05D003361 ORTHO05D003760 2.9e-34 151.0 231 57.6
PGSC0003DMG400030688 Solanum tuberosum HOM05D003361 ORTHO05D003760 5.4e-33 146.7 176 47.2
Peaxi162Scf00088g00618 Petunia axillaris HOM05D003361 ORTHO05D003760 7.1e-33 146.4 175 46.9
Lsat_1_v5_gn_4_88160 Lactuca sativa HOM05D003361 ORTHO05D003988 1.6e-32 145.2 121 58.7
Os04g0503500 Oryza sativa ssp. japonica HOM05D003361 ORTHO05D003760 2.7e-32 144.4 176 47.2
Psat1g109200 Pisum sativum HOM05D003361 ORTHO05D003760 6.0e-32 143.3 179 46.9
Os02g0613200 Oryza sativa ssp. japonica HOM05D003361 ORTHO05D003760 7.8e-32 142.9 177 45.2
Phvul.003G172400 Phaseolus vulgaris HOM05D003361 ORTHO05D003760 7.8e-32 142.9 231 59.3
Zm00001eb078100 Zea mays HOM05D003361 ORTHO05D003760 1.7e-31 141.7 176 44.9
Zm00001eb247040 Zea mays HOM05D003361 ORTHO05D003760 5.1e-31 140.2 175 45.7
SEGI_28212 Sequoiadendron giganteum HOM05D003361 ORTHO05D003760 1.5e-30 138.7 176 47.2
Duzib187G1093 Durio zibethinus HOM05D003361 ORTHO05D003760 3.3e-30 137.5 146 70.5
SHI02098 Sapria himalayana HOM05D003361 ORTHO05D003760 5.6e-30 136.7 180 48.3
HanXRQChr09g0274781 Helianthus annuus HOM05D003361 ORTHO05D003760 3.6e-29 134.0 176 47.2
Pp3c4_3150 Physcomitrium patens HOM05D003361 ORTHO05D003760 4.7e-29 133.7 176 44.3
PGSC0003DMG400007912 Solanum tuberosum HOM05D003361 ORTHO05D003760 8.1e-29 132.9 179 45.8
Sed0010441 Sechium edule HOM05D003361 ORTHO05D003760 1.1e-28 132.5 183 46.4
Peaxi162Scf01694g00019 Petunia axillaris HOM05D003361 ORTHO05D003760 2.4e-28 131.3 180 45.0
Cc06_g07660 Coffea canephora HOM05D003361 ORTHO05D003760 8.9e-28 129.4 179 45.3
Lj3g0027196 Lotus japonicus HOM05D003361 ORTHO05D003760 8.9e-28 129.4 191 59.7
MD17G1217000 Malus domestica HOM05D003361 ORTHO05D003760 1.5e-27 128.6 146 72.6
Solyc12g009870.2 Solanum lycopersicum HOM05D003361 ORTHO05D003760 1.5e-27 128.6 179 44.7
Nitab4.5_0009284g0020 Nicotiana tabacum HOM05D003361 ORTHO05D003760 4.4e-27 127.1 123 50.4
Duzib150G0304 Durio zibethinus HOM05D003361 ORTHO05D003760 7.6e-27 126.3 146 66.4
Nitab4.5_0002329g0140 Nicotiana tabacum HOM05D003361 ORTHO05D003760 5.4e-25 120.2 180 41.1
AagrBONN_evm.TU.Sc2ySwM_362.1382 Anthoceros agrestis HOM05D003361 ORTHO05D003760 7.8e-24 116.3 174 40.2
Nitab4.5_0008536g0030 Nicotiana tabacum HOM05D003361 ORTHO05D003760 7.8e-24 116.3 180 42.2
SMO200G0229 Selaginella moellendorffii HOM05D003361 ORTHO05D003760 1.0e-23 115.9 176 39.8
Pp3c8_1510 Physcomitrium patens HOM05D003361 ORTHO05D003760 8.7e-23 112.8 177 37.3
Glyma.13G367200 Glycine max HOM05D003361 ORTHO05D003760 7.3e-22 109.8 212 53.8
arahy.Tifrunner.gnm1.ann1.TB3UR8 Arachis hypogaea HOM05D003361 ORTHO05D003760 4.4e-19 100.5 117 48.7
arahy.Tifrunner.gnm1.ann1.YII6YD Arachis hypogaea HOM05D003361 ORTHO05D003760 4.4e-19 100.5 117 48.7
unitig_699.g19089 Utricularia gibba HOM05D003361 ORTHO05D003760 1.3e-18 99.0 193 39.4
Mapoly0032s0095 Marchantia polymorpha HOM05D003361 ORTHO05D003760 2.9e-18 97.8 185 34.1
SGA_v2.0_scaffold11G05885 Striga asiatica HOM05D003361 ORTHO05D003760 8.7e-15 86.3 142 44.4
Duzib150G0604 Durio zibethinus HOM05D003361 ORTHO05D003760 3.4e-11 74.3 91 49.5
Psat0s520g0120 Pisum sativum HOM05D003361 ORTHO05D003760 1.7e-10 72.0 78 46.2
Oeu027837.1 Olea europaea HOM05D003361 ORTHO05D003760 4.2e-09 67.4 99 80.8
Actinidia08955 Actinidia chinensis HOM05D003361 ORTHO05D003760 2.7e-08 64.7 99 81.8
CAN.G509.10 Capsicum annuum HOM05D003361 ORTHO05D003760 2.7e-08 64.7 50 58.0
Glyma.15G006200 Glycine max HOM05D003361 ORTHO05D003760 3.0e-07 61.2 99 38.4
FAN10G0285 Fragaria x ananassa HOM05D008657 ORTHO05D010869 5.1e-07 60.5 92 43.5
FAN10G3145 Fragaria x ananassa HOM05D003361 ORTHO05D003760 6.7e-07 60.1 92 43.5
Solyc07g007400.3 Solanum lycopersicum HOM05D003361 ORTHO05D003760 1.9e-06 58.5 90 50.0


User provided reference genes

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