Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 1.1e-167 593.2 285 100.0
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 4.9e-165 584.3 285 97.9
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 3.3e-161 571.6 287 96.2
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 4.8e-160 567.8 285 96.1
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 1.7e-141 506.1 284 82.4
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 2.5e-140 502.3 271 86.0
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 2.5e-140 502.3 276 84.8
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 3.2e-140 501.9 284 83.5
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 3.2e-140 501.9 271 86.0
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 4.2e-140 501.5 272 86.4
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 7.2e-140 500.7 284 81.3
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 1.2e-139 500.0 276 83.7
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 2.7e-139 498.8 286 82.2
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 3.6e-139 498.4 285 82.1
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 4.7e-139 498.0 275 82.5
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 1.8e-138 496.1 271 84.9
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 3.0e-138 495.4 284 82.4
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 3.9e-138 495.0 275 86.2
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 5.2e-138 494.6 272 83.1
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 5.2e-138 494.6 275 84.7
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 6.7e-138 494.2 275 84.0
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 1.1e-137 493.4 271 87.1
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 1.5e-137 493.0 289 81.0
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 2.0e-137 492.7 272 85.3
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 2.0e-137 492.7 289 81.0
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 4.4e-137 491.5 276 83.7
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 9.7e-137 490.3 281 82.2
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 2.2e-136 489.2 274 83.6
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 2.8e-136 488.8 279 82.4
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 2.8e-136 488.8 283 82.7
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 3.7e-136 488.4 282 81.9
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 4.8e-136 488.0 272 84.2
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 6.3e-136 487.6 284 80.3
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 6.3e-136 487.6 284 80.6
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 6.3e-136 487.6 282 80.5
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 8.2e-136 487.3 276 81.2
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 1.1e-135 486.9 283 82.3
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 1.1e-135 486.9 283 82.3
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 1.4e-135 486.5 275 82.9
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 3.1e-135 485.3 275 81.1
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 5.3e-135 484.6 272 83.5
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 5.3e-135 484.6 271 83.8
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 7.0e-135 484.2 275 81.1
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 7.0e-135 484.2 279 80.6
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 9.1e-135 483.8 271 83.4
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 1.2e-134 483.4 277 82.3
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 2.0e-134 482.6 283 79.2
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 2.0e-134 482.6 271 83.0
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 2.6e-134 482.3 310 76.1
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 5.9e-134 481.1 276 80.4
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 7.7e-134 480.7 282 78.7
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 7.7e-134 480.7 271 83.4
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 7.7e-134 480.7 267 84.3
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 2.2e-133 479.2 287 78.4
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 2.9e-133 478.8 286 78.3
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 2.9e-133 478.8 271 82.3
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 6.5e-133 477.6 307 76.5
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 8.5e-133 477.2 279 79.6
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 5.5e-132 474.6 271 81.9
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 7.2e-132 474.2 272 82.0
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 9.4e-132 473.8 275 81.1
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 3.6e-131 471.9 300 76.7
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 4.7e-131 471.5 272 82.0
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 8.0e-131 470.7 273 81.7
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 8.0e-131 470.7 276 76.8
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 1.8e-130 469.5 272 81.2
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 1.8e-130 469.5 272 82.0
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 4.0e-130 468.4 279 79.9
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 4.0e-130 468.4 275 77.1
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 6.7e-130 467.6 278 79.9
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 6.7e-130 467.6 281 77.2
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 8.8e-130 467.2 274 81.4
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 8.8e-130 467.2 275 76.7
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 1.5e-129 466.5 284 78.2
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 1.5e-129 466.5 325 71.1
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 2.0e-129 466.1 279 76.7
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 2.0e-129 466.1 279 76.7
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 2.6e-129 465.7 253 85.8
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 2.6e-129 465.7 283 78.1
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 4.4e-129 464.9 275 76.4
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 9.7e-129 463.8 284 76.4
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 4.8e-128 461.5 270 77.8
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 4.8e-128 461.5 304 74.7
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 8.2e-128 460.7 273 79.1
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 8.2e-128 460.7 273 79.1
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 2.4e-127 459.1 272 77.2
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 2.4e-127 459.1 271 80.4
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 7.0e-127 457.6 271 79.0
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 4.5e-126 454.9 270 80.7
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 1.0e-125 453.8 283 74.2
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 1.3e-125 453.4 271 77.5
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 1.7e-125 453.0 279 78.5
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 1.7e-125 453.0 272 76.5
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 3.8e-125 451.8 271 77.1
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 6.5e-125 451.1 325 68.0
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 1.2e-123 446.8 281 75.1
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 5.7e-121 438.0 282 72.7
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.1e-119 433.7 312 68.6
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 1.8e-119 433.0 275 76.4
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 3.1e-119 432.2 282 70.9
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 5.4e-119 431.4 268 74.6
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 1.3e-117 426.8 275 73.1
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 1.3e-117 426.8 274 75.9
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 1.1e-116 423.7 271 73.1
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 6.8e-114 414.5 359 59.9
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 1.2e-113 413.7 234 83.3
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 5.9e-110 401.4 238 78.6
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 2.5e-108 396.0 270 70.4
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 4.3e-108 395.2 227 83.3
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 2.0e-105 386.3 220 83.6
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 5.8e-105 384.8 289 66.8
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.6e-102 376.7 199 88.4
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 5.0e-101 371.7 210 82.4
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 1.3e-96 357.1 192 84.9
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 7.0e-95 351.3 273 58.2
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 3.3e-92 342.4 283 58.3
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.6e-91 340.1 228 73.2
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 4.7e-91 338.6 272 60.7
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 2.1e-86 323.2 189 78.8
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 2.1e-86 323.2 189 78.8
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.5e-81 307.0 226 67.3
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 7.8e-78 294.7 226 61.9
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 1.8e-74 283.5 256 52.7
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.2e-70 270.8 156 84.0
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 3.1e-66 256.1 195 61.5
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 4.0e-66 255.8 293 50.5
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 2.7e-62 243.0 151 73.5
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 3.7e-59 232.6 199 52.8
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 9.0e-58 228.0 131 79.4
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 2.2e-56 223.4 266 45.5
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 5.1e-45 185.7 191 49.7
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.0e-40 171.4 107 74.8
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 2.0e-36 157.1 211 40.3
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 2.5e-36 156.8 283 37.1
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 1.4e-29 134.4 84 71.4
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 2.8e-27 126.7 102 59.8
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 2.5e-15 87.0 79 54.4
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 7.2e-15 85.5 51 74.5
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 1.7e-11 74.3 45 75.6


User provided reference genes

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