Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3069 Papaver somniferum HOM05D000838 ORTHO05D000656 2.5e-75 285.4 151 100.0
PSO170G1393 Papaver somniferum HOM05D000838 ORTHO05D000656 1.3e-60 236.5 166 80.1
PSO339G0421 Papaver somniferum HOM05D000838 ORTHO05D000656 4.2e-22 108.6 162 50.0
PSO384G0907 Papaver somniferum HOM05D000838 ORTHO05D000656 2.1e-21 106.3 162 49.4
PSO017G1639 Papaver somniferum HOM05D000838 ORTHO05D000656 4.7e-21 105.1 147 50.3
PSO017G1576 Papaver somniferum HOM05D000838 ORTHO05D000656 2.0e-19 99.8 142 49.3
PSO063G3010 Papaver somniferum HOM05D000838 ORTHO05D000656 7.4e-19 97.8 149 47.7
PSO135G0268 Papaver somniferum HOM05D000838 ORTHO05D000656 8.2e-18 94.4 160 46.2
PSO339G3801 Papaver somniferum HOM05D000838 ORTHO05D000656 7.0e-17 91.3 145 44.8
TPR.G2166 Trifolium pratense HOM05D000838 ORTHO05D000656 1.0e-15 87.4 161 40.4
PSO724G0228 Papaver somniferum HOM05D000838 ORTHO05D000656 5.0e-15 85.1 159 42.1
PSO170G4603 Papaver somniferum HOM05D000838 ORTHO05D000656 1.1e-14 84.0 142 45.8
arahy.Tifrunner.gnm1.ann1.ZQ919F Arachis hypogaea HOM05D000838 ORTHO05D000656 1.5e-14 83.6 156 42.9
arahy.Tifrunner.gnm1.ann1.DF1HSU Arachis hypogaea HOM05D000838 ORTHO05D000656 3.2e-14 82.4 156 42.9
Lalb_Chr17g0345691 Lupinus albus HOM05D000838 ORTHO05D000656 4.2e-14 82.0 157 41.4
Glyma.02G237500 Glycine max HOM05D000838 ORTHO05D000656 5.5e-14 81.6 148 43.9
Aqoxy4G03287 Aquilegia oxysepala HOM05D000838 ORTHO05D000656 2.7e-13 79.3 156 42.9
Psat2g050840 Pisum sativum HOM05D000166 ORTHO05D001348 2.7e-13 79.3 157 42.0
FAN21G3661 Fragaria x ananassa HOM05D000838 ORTHO05D000656 8.0e-13 77.8 148 42.6
Nn2g10224 Nelumbo nucifera HOM05D000838 ORTHO05D000656 8.0e-13 77.8 147 40.8
TPR.G37644 Trifolium pratense HOM05D000838 ORTHO05D000656 8.0e-13 77.8 161 40.4
CANSAT54G1365 Cannabis sativa HOM05D000838 ORTHO05D000656 1.4e-12 77.0 156 37.8
Phvul.008G244300 Phaseolus vulgaris HOM05D000838 ORTHO05D000656 1.8e-12 76.6 157 41.4
FvH4_3g40930 Fragaria vesca HOM05D000838 ORTHO05D000656 2.3e-12 76.3 149 43.0
Cpa.g.sc2.268 Carica papaya HOM05D000838 ORTHO05D000656 5.2e-12 75.1 148 40.5
VMungo0647G1604 Vigna mungo HOM05D000838 ORTHO05D000656 6.7e-12 74.7 165 38.8
TAR633G0539 Trochodendron aralioides HOM05D000838 ORTHO05D000656 1.2e-11 73.9 156 41.0
RcHm_v2.0_Chr5g0073681 Rosa chinensis HOM05D000838 ORTHO05D000656 4.4e-11 72.0 147 40.1
FAN16G1700 Fragaria x ananassa HOM05D000838 ORTHO05D000656 7.5e-11 71.2 138 42.8
Lsat_1_v5_gn_9_13380 Lactuca sativa HOM05D000838 ORTHO05D000656 7.5e-11 71.2 156 38.5
FAN11G3054 Fragaria x ananassa HOM05D000838 ORTHO05D000656 9.7e-11 70.9 138 42.8
CSS0005346 Camellia sinensis var. sinensis HOM05D000838 ORTHO05D000656 1.3e-10 70.5 149 39.6
CSS0007617 Camellia sinensis var. sinensis HOM05D000838 ORTHO05D000656 1.3e-10 70.5 149 39.6
PSO339G4246 Papaver somniferum HOM05D000838 ORTHO05D000656 1.3e-10 70.5 144 38.9
Carub.0008s1882 Capsella rubella HOM05D000838 ORTHO05D000656 3.7e-10 68.9 149 38.3
QL11p036107 Quercus lobata HOM05D000838 ORTHO05D000656 3.7e-10 68.9 144 38.2
Lj2A1104T78 Lonicera japonica HOM05D000838 ORTHO05D000656 4.8e-10 68.6 154 35.1
Rhsim01G0244500 Rhododendron simsii HOM05D000838 ORTHO05D000656 4.8e-10 68.6 155 38.1
Actinidia23830 Actinidia chinensis HOM05D000838 ORTHO05D000656 6.3e-10 68.2 155 36.1
AL8G34380 Arabidopsis lyrata HOM05D000838 ORTHO05D000656 6.3e-10 68.2 149 38.3
CsaV3_7G008670 Cucumis sativus L. HOM05D000838 ORTHO05D000656 8.2e-10 67.8 144 36.8
PSO513G0028 Papaver somniferum HOM05D000838 ORTHO05D000656 8.2e-10 67.8 144 36.8
Medtr2g102450 Medicago truncatula HOM05D000838 ORTHO05D000656 1.1e-09 67.4 160 38.1
HanXRQChr13g0391821 Helianthus annuus HOM05D000838 ORTHO05D000656 1.4e-09 67.0 161 37.3
Sed0001768 Sechium edule HOM05D000838 ORTHO05D000656 1.8e-09 66.6 146 38.4
Nitab4.5_0003194g0040 Nicotiana tabacum HOM05D000838 ORTHO05D000656 3.1e-09 65.9 158 35.4
PSO478G4995 Papaver somniferum HOM05D000838 ORTHO05D000656 3.1e-09 65.9 113 45.1
TWI79G0758 Tripterygium wilfordii HOM05D000838 ORTHO05D000656 4.1e-09 65.5 147 36.7
ClCG02G005860 Citrullus lanatus HOM05D000838 ORTHO05D000656 1.2e-08 63.9 146 36.3
CiPaw.14G049000 Carya illinoinensis HOM05D000838 ORTHO05D000656 1.6e-08 63.5 156 38.5
Dinv28752 Davidia involucrata HOM05D000838 ORTHO05D000656 2.0e-08 63.2 157 34.4
Oeu011396.1 Olea europaea HOM05D000838 ORTHO05D000656 2.0e-08 63.2 156 39.7
MELO3C018443.2 Cucumis melo HOM05D000838 ORTHO05D000656 2.7e-08 62.8 144 36.1
ECA247G0162 Erigeron canadensis HOM05D000838 ORTHO05D000656 3.5e-08 62.4 155 36.1
Cc01_g15440 Coffea canephora HOM05D000838 ORTHO05D000656 5.9e-08 61.6 162 37.0
DCAR_004791 Daucus carota HOM05D000838 ORTHO05D000656 7.7e-08 61.2 150 35.3
COL.COLO4_11229 Corchorus olitorius HOM05D000838 ORTHO05D000656 1.3e-07 60.5 153 38.6
QL01p023780 Quercus lobata HOM05D000838 ORTHO05D000656 1.3e-07 60.5 157 34.4
Thecc.02G099300 Theobroma cacao HOM05D000838 ORTHO05D000656 1.3e-07 60.5 139 33.1
Gohir.D13G038100 Gossypium hirsutum HOM05D000838 ORTHO05D000656 1.7e-07 60.1 139 32.4
Gorai.013G042700 Gossypium raimondii HOM05D000838 ORTHO05D000656 1.7e-07 60.1 139 32.4
Potri.009G103100 Populus trichocarpa HOM05D000838 ORTHO05D000656 2.9e-07 59.3 143 32.2
ATR1127G154 Amborella trichopoda HOM05D000838 ORTHO05D000656 3.8e-07 58.9 150 34.7
CAN.G181.26 Capsicum annuum HOM05D000838 ORTHO05D000656 5.0e-07 58.5 162 32.7
ECA247G1689 Erigeron canadensis HOM05D000838 ORTHO05D000656 5.0e-07 58.5 146 32.2
Migut.D00805 Erythranthe guttata HOM05D000838 ORTHO05D000656 5.0e-07 58.5 161 36.6
Nitab4.5_0002167g0020 Nicotiana tabacum HOM05D000838 ORTHO05D000656 5.0e-07 58.5 159 34.6
Prupe.6G038900 Prunus persica HOM05D000838 ORTHO05D000656 5.0e-07 58.5 149 34.9
Eucgr.G01455 Eucalyptus grandis HOM05D000838 ORTHO05D000656 6.5e-07 58.2 149 34.2
Peaxi162Scf00131g10121 Petunia axillaris HOM05D000838 ORTHO05D000656 6.5e-07 58.2 153 35.9
TWI79G0856 Tripterygium wilfordii HOM05D000838 ORTHO05D000656 6.5e-07 58.2 143 35.7
vmacro15069 Vaccinium macrocarpon HOM05D000838 ORTHO05D000656 6.5e-07 58.2 142 34.5
Potri.009G103200 Populus trichocarpa HOM05D000838 ORTHO05D000656 1.1e-06 57.4 158 36.7
PGR142G0059 Punica granatum HOM05D000838 ORTHO05D000656 1.1e-06 57.4 159 30.8
Sc26g0004010 Simmondsia chinensis HOM05D000838 ORTHO05D000656 1.1e-06 57.4 146 32.2
GSVIVG01031761001 Vitis vinifera HOM05D000838 ORTHO05D000656 1.1e-06 57.4 149 36.2
Hund17580 Selenicereus undatus HOM05D000838 ORTHO05D000656 1.5e-06 57.0 149 33.6
Atru.chr5.2735 Acer truncatum HOM05D000838 ORTHO05D000656 1.9e-06 56.6 141 32.6
MD03G1047900 Malus domestica HOM05D000838 ORTHO05D000656 1.9e-06 56.6 147 35.4
Oeu043553.1 Olea europaea HOM05D000838 ORTHO05D000656 1.9e-06 56.6 140 35.7
Duzib132G1154 Durio zibethinus HOM05D000838 ORTHO05D000656 2.5e-06 56.2 139 30.9
Sabra09G0079000 Salix brachista HOM05D000838 ORTHO05D000656 2.5e-06 56.2 152 31.6
AL8G18460 Arabidopsis lyrata HOM05D000838 ORTHO05D000656 3.2e-06 55.8 146 35.6
CiPaw.05G052000 Carya illinoinensis HOM05D000838 ORTHO05D000656 3.2e-06 55.8 143 32.2
Haze_01838 Corylus avellana HOM05D000838 ORTHO05D000656 3.2e-06 55.8 141 33.3
Haze_01843 Corylus avellana HOM05D000838 ORTHO05D000656 3.2e-06 55.8 141 33.3
AUR62011442 Chenopodium quinoa HOM05D000838 ORTHO05D000656 4.2e-06 55.5 140 30.7
Ciclev10029072m.g Citrus clementina HOM05D000838 ORTHO05D000656 4.2e-06 55.5 143 35.7
Os05g0481400 Oryza sativa ssp. japonica HOM05D000838 ORTHO05D000656 4.2e-06 55.5 145 31.7
Hund06179 Selenicereus undatus HOM05D000838 ORTHO05D000656 4.2e-06 55.5 142 34.5
Lsat_1_v5_gn_1_20940 Lactuca sativa HOM05D000838 ORTHO05D000656 5.5e-06 55.1 152 31.6
Psat5g043480 Pisum sativum HOM05D000838 ORTHO05D000656 5.5e-06 55.1 147 32.7
Prupe.1G437900 Prunus persica HOM05D000838 ORTHO05D000656 5.5e-06 55.1 158 32.3
Prupe.1G438000 Prunus persica HOM05D000838 ORTHO05D000656 5.5e-06 55.1 153 31.4
MSTRG.1338 Avicennia marina HOM05D000838 ORTHO05D000656 7.2e-06 54.7 142 34.5
HanXRQChr02g0037701 Helianthus annuus HOM05D000838 ORTHO05D000656 9.4e-06 54.3 152 30.9
Nitab4.5_0003503g0050 Nicotiana tabacum HOM05D000838 ORTHO05D000656 9.4e-06 54.3 139 32.4


User provided reference genes

Program Settings