Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G3027 Papaver somniferum HOM05D006667 ORTHO05D008387 5.5e-120 435.3 419 100.0
PSO170G5099 Papaver somniferum HOM05D006667 ORTHO05D008387 5.3e-91 339.0 419 90.5
Aqoxy3G04313 Aquilegia oxysepala HOM05D006667 ORTHO05D008387 4.0e-78 296.2 407 66.6
TAR622G0133 Trochodendron aralioides HOM05D006667 ORTHO05D008387 2.5e-72 276.9 403 69.2
Dinv07500 Davidia involucrata HOM05D006667 ORTHO05D008387 6.1e-71 272.3 409 70.9
CDE04G2906 Ceratophyllum demersum HOM05D006667 ORTHO05D008387 1.5e-69 267.7 395 82.0
Cpa.g.sc60.94 Carica papaya HOM05D006667 ORTHO05D008387 1.7e-68 264.2 403 73.7
Actinidia04346 Actinidia chinensis HOM05D006667 ORTHO05D008387 2.8e-68 263.5 401 66.3
Rhsim12G0089400 Rhododendron simsii HOM05D006667 ORTHO05D008387 4.8e-68 262.7 406 65.5
EL10Ac9g22983 Beta vulgaris HOM05D006667 ORTHO05D008387 1.1e-67 261.5 405 73.1
Hund24389 Selenicereus undatus HOM05D006667 ORTHO05D008387 1.4e-67 261.2 404 72.8
MBI06_g27487_MAGBIO Magnolia biondii HOM05D006667 ORTHO05D008387 2.4e-67 260.4 408 69.9
QL03p045401 Quercus lobata HOM05D006667 ORTHO05D008387 2.4e-67 260.4 403 70.5
CSS0023228 Camellia sinensis var. sinensis HOM05D006667 ORTHO05D008387 4.1e-67 259.6 403 72.2
Aa31LG11G2790 Aethionema arabicum HOM05D006667 ORTHO05D008387 2.7e-66 256.9 403 71.7
Ciclev10033734m.g Citrus clementina HOM05D006667 ORTHO05D008387 2.7e-66 256.9 403 68.5
Peaxi162Scf00681g00319 Petunia axillaris HOM05D006667 ORTHO05D008387 3.5e-66 256.5 407 68.1
Sabra05G0073100 Salix brachista HOM05D006667 ORTHO05D008387 3.5e-66 256.5 397 68.0
Migut.L00803 Erythranthe guttata HOM05D006667 ORTHO05D008387 7.7e-66 255.4 403 70.5
Medtr1g114610 Medicago truncatula HOM05D006667 ORTHO05D008387 7.7e-66 255.4 411 67.6
THA.LOC104819372 Tarenaya hassleriana HOM05D006667 ORTHO05D008387 1.3e-65 254.6 407 71.3
CARHR190200 Cardamine hirsuta HOM05D006667 ORTHO05D008387 1.7e-65 254.2 403 71.7
BcaC03g18029 Brassica carinata HOM05D006667 ORTHO05D008387 2.9e-65 253.4 410 66.8
Prupe.1G349400 Prunus persica HOM05D006667 ORTHO05D008387 3.8e-65 253.1 403 66.5
AT5G23340 Arabidopsis thaliana HOM05D006667 ORTHO05D008387 6.5e-65 252.3 403 75.4
BraA06t26360Z Brassica rapa HOM05D006667 ORTHO05D008387 8.6e-65 251.9 403 71.0
Thhalv10004329m.g Eutrema salsugineum HOM05D006667 ORTHO05D008387 8.6e-65 251.9 403 72.5
Hma1.2p1_0044F.1_g026320 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 8.6e-65 251.9 402 74.1
A06p34280 Brassica napus HOM05D006667 ORTHO05D008387 1.1e-64 251.5 403 74.9
C02p60910 Brassica napus HOM05D006667 ORTHO05D008387 1.1e-64 251.5 403 67.7
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 1.9e-64 250.8 403 71.0
BolC7t44948H Brassica oleracea HOM05D006667 ORTHO05D008387 1.9e-64 250.8 403 74.9
SalBow2G2931 Salvia bowleyana HOM05D006667 ORTHO05D008387 1.9e-64 250.8 400 71.2
Nitab4.5_0004979g0060 Nicotiana tabacum HOM05D006667 ORTHO05D008387 2.5e-64 250.4 407 70.0
Sed0011343 Sechium edule HOM05D006667 ORTHO05D008387 2.5e-64 250.4 403 70.5
Sed0022119 Sechium edule HOM05D006667 ORTHO05D008387 2.5e-64 250.4 403 70.2
FvH4_4g37160 Fragaria vesca HOM05D006667 ORTHO05D008387 3.3e-64 250.0 403 67.2
ClCG02G014160 Citrullus lanatus HOM05D006667 ORTHO05D008387 5.5e-64 249.2 403 72.2
Nitab4.5_0005997g0030 Nicotiana tabacum HOM05D006667 ORTHO05D008387 5.5e-64 249.2 407 71.3
Solyc04g008980.3 Solanum lycopersicum HOM05D006667 ORTHO05D008387 5.5e-64 249.2 414 69.1
AL6G34600 Arabidopsis lyrata HOM05D006667 ORTHO05D008387 7.2e-64 248.8 403 71.7
FAN12G3199 Fragaria x ananassa HOM05D006667 ORTHO05D008387 7.2e-64 248.8 403 67.0
Sopen04g004160 Solanum pennellii HOM05D006667 ORTHO05D008387 7.2e-64 248.8 414 69.3
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 1.2e-63 248.1 400 68.0
RcHm_v2.0_Chr4g0446961 Rosa chinensis HOM05D006667 ORTHO05D008387 1.2e-63 248.1 407 66.8
Psat6g234200 Pisum sativum HOM05D006667 ORTHO05D008387 1.6e-63 247.7 408 65.4
BraA02t09050Z Brassica rapa HOM05D006667 ORTHO05D008387 2.8e-63 246.9 403 68.5
PGSC0003DMG400011513 Solanum tuberosum HOM05D006667 ORTHO05D008387 2.8e-63 246.9 414 64.7
A02p41020 Brassica napus HOM05D006667 ORTHO05D008387 6.1e-63 245.7 403 68.0
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 6.1e-63 245.7 403 67.0
Thecc.02G154400 Theobroma cacao HOM05D006667 ORTHO05D008387 8.0e-63 245.4 406 70.7
Lj6A708T61 Lonicera japonica HOM05D006667 ORTHO05D008387 1.0e-62 245.0 404 64.9
Lj6A713T75 Lonicera japonica HOM05D006667 ORTHO05D008387 1.0e-62 245.0 404 64.9
CiPaw.05G172300 Carya illinoinensis HOM05D006667 ORTHO05D008387 5.2e-62 242.7 406 69.2
MSTRG.8092 Avicennia marina HOM05D006667 ORTHO05D008387 6.8e-62 242.3 403 71.7
Gorai.008G147100 Gossypium raimondii HOM05D006667 ORTHO05D008387 8.9e-62 241.9 409 68.5
Gohir.D12G135900 Gossypium hirsutum HOM05D006667 ORTHO05D008387 1.5e-61 241.1 409 68.5
Hma1.2p1_0044F.1_g026310 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 2.0e-61 240.7 432 52.8
Carub.0006s2112 Capsella rubella HOM05D006667 ORTHO05D008387 2.6e-61 240.4 403 72.2
CAN.G274.16 Capsicum annuum HOM05D006667 ORTHO05D008387 9.8e-61 238.4 400 70.2
PGR142G2507 Punica granatum HOM05D006667 ORTHO05D008387 1.3e-60 238.0 400 72.2
DCAR_002607 Daucus carota HOM05D006667 ORTHO05D008387 2.8e-60 236.9 414 63.5
VMungo0720G1985 Vigna mungo HOM05D006667 ORTHO05D008387 1.8e-59 234.2 408 63.0
Sp2g23820 Schrenkiella parvula HOM05D006667 ORTHO05D008387 4.1e-59 233.0 403 69.7
arahy.Tifrunner.gnm1.ann1.IH6UK4 Arachis hypogaea HOM05D006667 ORTHO05D008387 9.2e-59 231.9 406 64.8
Lj5g0023243 Lotus japonicus HOM05D006667 ORTHO05D008387 1.7e-57 227.6 397 66.0
Potri.005G088800 Populus trichocarpa HOM05D006667 ORTHO05D008387 5.0e-57 226.1 402 64.9
Manes.04G162700 Manihot esculenta HOM05D006667 ORTHO05D008387 6.6e-57 225.7 401 69.3
Lalb_Chr02g0143651 Lupinus albus HOM05D006667 ORTHO05D008387 8.6e-57 225.3 396 65.2
SGA_v2.0_scaffold80G25957 Striga asiatica HOM05D006667 ORTHO05D008387 1.5e-56 224.6 401 69.8
BcaB07g29860 Brassica carinata HOM05D006667 ORTHO05D008387 5.6e-56 222.6 403 71.5
TWI74G1436 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 7.3e-56 222.2 403 67.7
Atru.chr11.1242 Acer truncatum HOM05D006667 ORTHO05D008387 1.6e-55 221.1 403 68.0
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 1.6e-55 221.1 393 65.4
Sabra07G0063900 Salix brachista HOM05D006667 ORTHO05D008387 3.6e-55 219.9 464 50.6
Haze_11790 Corylus avellana HOM05D006667 ORTHO05D008387 1.8e-54 217.6 407 70.8
Sc10g0006700 Simmondsia chinensis HOM05D006667 ORTHO05D008387 2.3e-54 217.2 400 63.2
CANSAT78G2402 Cannabis sativa HOM05D006667 ORTHO05D008387 5.2e-54 216.1 407 63.1
Cfa008778 Carpinus fangiana HOM05D006667 ORTHO05D008387 2.6e-53 213.8 412 60.2
Glyma.20G102500 Glycine max HOM05D006667 ORTHO05D008387 7.5e-53 212.2 404 66.6
AUR62032948 Chenopodium quinoa HOM05D006667 ORTHO05D008387 9.8e-53 211.8 404 63.6
Glyma.10G286600 Glycine max HOM05D006667 ORTHO05D008387 1.7e-52 211.1 402 62.9
Zm00001eb185570 Zea mays HOM05D006667 ORTHO05D008387 1.7e-52 211.1 407 56.0
unitig_749.g13342 Utricularia gibba HOM05D006667 ORTHO05D008387 4.9e-52 209.5 399 60.2
TPR.G4129 Trifolium pratense HOM05D006667 ORTHO05D008387 8.3e-52 208.8 440 60.0
vmacro15997 Vaccinium macrocarpon HOM05D006667 ORTHO05D008387 1.6e-50 204.5 533 47.1
Ah.03g147880 Amaranthus hybridus HOM05D006667 ORTHO05D008387 2.7e-50 203.8 436 54.8
Nn3g18579 Nelumbo nucifera HOM05D006667 ORTHO05D008387 3.3e-48 196.8 411 74.9
SEGI_01489 Sequoiadendron giganteum HOM05D006667 ORTHO05D008387 9.5e-48 195.3 400 72.5
ECA246G5028 Erigeron canadensis HOM05D002605 ORTHO05D002842 1.3e-44 184.9 396 65.7
Lsat_1_v5_gn_3_34481 Lactuca sativa HOM05D006667 ORTHO05D008387 5.4e-43 179.5 415 63.9
Ca_11261_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 1.3e-41 174.9 440 56.1
Oeu027930.1 Olea europaea HOM05D006667 ORTHO05D008387 5.6e-40 169.5 402 65.4
Eucgr.G02589 Eucalyptus grandis HOM05D006667 ORTHO05D008387 2.8e-39 167.2 401 62.1
HanXRQChr17g0541041 Helianthus annuus HOM05D006667 ORTHO05D008387 4.7e-39 166.4 403 64.0
Os02g0636400 Oryza sativa ssp. japonica HOM05D006667 ORTHO05D008387 4.7e-39 166.4 127 58.3
COL.COLO4_33111 Corchorus olitorius HOM05D006667 ORTHO05D008387 1.4e-38 164.9 109 74.3
TWI53G1716 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 9.9e-37 158.7 405 62.2
Gohir.A12G132300 Gossypium hirsutum HOM05D006667 ORTHO05D008387 1.3e-36 158.3 125 60.8
ATR0618G066 Amborella trichopoda HOM05D006667 ORTHO05D008387 1.7e-36 157.9 396 72.0
arahy.Tifrunner.gnm1.ann1.6XP1A8 Arachis hypogaea HOM05D006667 ORTHO05D008387 1.6e-34 151.4 109 66.1
arahy.Tifrunner.gnm1.ann1.RI7T4X Arachis hypogaea HOM05D006667 ORTHO05D008387 1.6e-34 151.4 109 66.1
HanXRQChr06g0171711 Helianthus annuus HOM05D006667 ORTHO05D008387 6.6e-33 146.0 108 63.9
AUR62017733 Chenopodium quinoa HOM05D006667 ORTHO05D008387 8.6e-33 145.6 420 48.8
SMO116G0353 Selaginella moellendorffii HOM05D006667 ORTHO05D008387 1.9e-32 144.4 391 68.3
arahy.Tifrunner.gnm1.ann1.ALJ85P Arachis hypogaea HOM05D006667 ORTHO05D008387 1.2e-31 141.7 97 71.1
HPP92_025485 Vanilla planifolia HOM05D006667 ORTHO05D008387 2.8e-31 140.6 106 65.1
Phvul.007G014200 Phaseolus vulgaris HOM05D006667 ORTHO05D008387 9.9e-29 132.1 117 55.6
arahy.Tifrunner.gnm1.ann1.L6WSTP Arachis hypogaea HOM05D006667 ORTHO05D008387 1.1e-27 128.6 93 67.7
Dinv17648 Davidia involucrata HOM05D006667 ORTHO05D008387 2.3e-25 120.9 85 65.9
Medtr7g010500 Medicago truncatula HOM05D006667 ORTHO05D008387 3.5e-18 97.1 77 61.0
Ca_11262_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 8.7e-17 92.4 98 46.9
Potri.007G075600 Populus trichocarpa HOM05D006667 ORTHO05D008387 1.2e-13 82.0 123 36.6
Pp3c10_8230 Physcomitrium patens HOM05D006667 ORTHO05D008387 1.6e-07 61.6 58 51.7
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 2.1e-07 61.2 89 36.0
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 6.2e-07 59.7 89 34.8
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 2.4e-06 57.8 89 34.8
PGSC0003DMG400010583 Solanum tuberosum HOM05D002813 ORTHO05D003203 2.4e-06 57.8 86 36.0
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 6.9e-06 56.2 94 28.7
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 9.0e-06 55.8 86 34.9


User provided reference genes

Program Settings