Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2953 Papaver somniferum HOM05D005625 ORTHO05D007564 0.0e+00 1085.5 550 100.0
PSO170G6063 Papaver somniferum HOM05D005625 ORTHO05D007564 2.8e-305 1051.2 550 96.7
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 1.0e-222 776.9 555 70.8
Aqoxy5G00836 Aquilegia oxysepala HOM05D005625 ORTHO05D007564 4.7e-220 768.1 552 69.6
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 1.1e-213 746.9 556 68.2
CSS0007097 Camellia sinensis var. sinensis HOM05D005625 ORTHO05D007564 3.1e-208 728.8 550 67.3
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 4.1e-208 728.4 526 69.0
Prupe.1G544200 Prunus persica HOM05D005625 ORTHO05D007564 5.0e-206 721.5 550 66.7
Rhsim02G0173300 Rhododendron simsii HOM05D005625 ORTHO05D007564 8.0e-204 714.1 528 68.2
Thecc.08G177300 Theobroma cacao HOM05D005625 ORTHO05D007564 8.0e-204 714.1 534 66.5
GSVIVG01036380001 Vitis vinifera HOM05D005625 ORTHO05D007564 1.0e-203 713.8 528 67.6
Haze_13951 Corylus avellana HOM05D005625 ORTHO05D007564 1.8e-203 713.0 528 67.0
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 4.4e-202 708.4 550 67.5
MD15G1395400 Malus domestica HOM05D005625 ORTHO05D007564 1.3e-201 706.8 530 67.4
CANSAT56G1751 Cannabis sativa HOM05D005625 ORTHO05D007564 2.2e-201 706.1 529 66.0
RcHm_v2.0_Chr7g0232101 Rosa chinensis HOM05D005625 ORTHO05D007564 6.3e-201 704.5 529 66.5
AUR62024898 Chenopodium quinoa HOM05D005625 ORTHO05D007564 8.3e-201 704.1 525 65.7
FvH4_5g33370 Fragaria vesca HOM05D005625 ORTHO05D007564 1.1e-200 703.7 528 66.7
CiPaw.04G063100 Carya illinoinensis HOM05D005625 ORTHO05D007564 1.4e-200 703.4 529 66.2
Ah.02g127420 Amaranthus hybridus HOM05D005625 ORTHO05D007564 2.4e-200 702.6 531 65.0
FAN18G2766 Fragaria x ananassa HOM05D005625 ORTHO05D007564 4.1e-200 701.8 528 66.5
QL09p002063 Quercus lobata HOM05D005625 ORTHO05D007564 4.1e-200 701.8 528 67.0
AUR62030641 Chenopodium quinoa HOM05D005625 ORTHO05D007564 7.0e-200 701.0 541 64.0
Potri.019G072700 Populus trichocarpa HOM05D005625 ORTHO05D007564 9.1e-200 700.7 528 66.7
Lj7C421T14 Lonicera japonica HOM05D005625 ORTHO05D007564 1.0e-198 697.2 538 66.0
Gohir.D13G119200 Gossypium hirsutum HOM05D005625 ORTHO05D007564 8.6e-198 694.1 532 64.5
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 1.5e-197 693.3 536 65.1
Gohir.A13G116000 Gossypium hirsutum HOM05D005625 ORTHO05D007564 2.5e-197 692.6 534 64.2
Gorai.013G133700 Gossypium raimondii HOM05D005625 ORTHO05D007564 2.5e-197 692.6 532 64.3
Sopen11g018630 Solanum pennellii HOM05D005625 ORTHO05D007564 1.2e-196 690.3 530 64.5
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 3.6e-196 688.7 534 64.2
TWI18G0532 Tripterygium wilfordii HOM05D005625 ORTHO05D007564 6.1e-196 688.0 531 64.2
Sabra19G0084000 Salix brachista HOM05D005625 ORTHO05D007564 8.0e-196 687.6 546 64.1
Cc10_g08740 Coffea canephora HOM05D005625 ORTHO05D007564 1.8e-195 686.4 526 64.8
Oeu028924.1 Olea europaea HOM05D005625 ORTHO05D007564 4.0e-195 685.3 532 65.0
Phvul.006G130900 Phaseolus vulgaris HOM05D005625 ORTHO05D007564 6.8e-195 684.5 528 64.8
Ciclev10014850m.g Citrus clementina HOM05D005625 ORTHO05D007564 1.2e-194 683.7 528 64.4
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 2.0e-194 682.9 530 64.5
CAN.G990.6 Capsicum annuum HOM05D005625 ORTHO05D007564 2.6e-194 682.6 542 62.0
Cfa008087 Carpinus fangiana HOM05D005625 ORTHO05D007564 7.5e-194 681.0 544 63.4
Medtr2g029250 Medicago truncatula HOM05D005625 ORTHO05D007564 7.5e-194 681.0 526 64.3
FAN04G0928 Fragaria x ananassa HOM05D005625 ORTHO05D007564 1.7e-193 679.9 547 63.3
Lj6g0017830 Lotus japonicus HOM05D005625 ORTHO05D007564 1.7e-193 679.9 531 64.4
Glyma.09G021200 Glycine max HOM05D005625 ORTHO05D007564 8.3e-193 677.6 528 63.1
DCAR_017431 Daucus carota HOM05D005625 ORTHO05D007564 7.0e-192 674.5 534 65.4
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 2.9e-190 669.1 525 62.5
TPR.G17519 Trifolium pratense HOM05D005625 ORTHO05D007564 6.6e-190 667.9 526 63.5
MELO3C011830.2 Cucumis melo HOM05D005625 ORTHO05D007564 9.5e-189 664.1 528 61.7
arahy.Tifrunner.gnm1.ann1.U40EKY Arachis hypogaea HOM05D005625 ORTHO05D007564 1.2e-188 663.7 571 59.4
MSTRG.25496 Avicennia marina HOM05D005625 ORTHO05D007564 1.6e-188 663.3 532 62.4
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 4.7e-188 661.8 528 65.0
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 1.0e-187 660.6 582 58.1
CsaV3_1G044090 Cucumis sativus L. HOM05D005625 ORTHO05D007564 1.0e-187 660.6 528 61.4
Psat1g169440 Pisum sativum HOM05D005625 ORTHO05D007564 4.0e-187 658.7 528 61.9
Migut.C01373 Erythranthe guttata HOM05D005625 ORTHO05D007564 5.2e-187 658.3 525 63.2
AT1G71440 Arabidopsis thaliana HOM05D005625 ORTHO05D007564 2.0e-186 656.4 532 60.5
THA.LOC104810982 Tarenaya hassleriana HOM05D005625 ORTHO05D007564 3.4e-186 655.6 535 60.2
Carub.0002s1829 Capsella rubella HOM05D005625 ORTHO05D007564 4.4e-186 655.2 534 59.6
AL2G31100 Arabidopsis lyrata HOM05D005625 ORTHO05D007564 7.5e-186 654.4 532 59.6
Thhalv10018392m.g Eutrema salsugineum HOM05D005625 ORTHO05D007564 1.4e-184 650.2 532 59.8
CARHR291240 Cardamine hirsuta HOM05D005625 ORTHO05D007564 3.2e-184 649.0 526 60.3
Eucgr.K01840 Eucalyptus grandis HOM05D005625 ORTHO05D007564 1.5e-181 640.2 534 60.5
Sed0019265 Sechium edule HOM05D005625 ORTHO05D007564 2.5e-181 639.4 528 59.5
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 3.3e-181 639.0 525 61.3
Sp5g26600 Schrenkiella parvula HOM05D005625 ORTHO05D007564 4.3e-181 638.6 526 59.1
ECA232G1187 Erigeron canadensis HOM05D005625 ORTHO05D007564 1.4e-179 633.6 534 59.2
Aa31LG4G9140 Aethionema arabicum HOM05D005625 ORTHO05D007564 4.0e-179 632.1 534 58.6
Nn5g27281 Nelumbo nucifera HOM05D005625 ORTHO05D007564 5.2e-179 631.7 435 71.5
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 3.7e-177 625.5 549 57.7
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 3.2e-176 622.5 508 62.2
Duzib177G0227 Durio zibethinus HOM05D005625 ORTHO05D007564 9.2e-176 620.9 533 60.2
VMungo0540G1936 Vigna mungo HOM05D005625 ORTHO05D007564 2.7e-175 619.4 557 58.3
Zm00001eb233200 Zea mays HOM05D005625 ORTHO05D007564 1.0e-174 617.5 532 59.2
arahy.Tifrunner.gnm1.ann1.0NEN23 Arachis hypogaea HOM05D005625 ORTHO05D007564 1.7e-174 616.7 580 55.3
arahy.Tifrunner.gnm1.ann1.23CDJN Arachis hypogaea HOM05D005625 ORTHO05D007564 1.7e-174 616.7 495 62.4
Lsat_1_v5_gn_2_82040 Lactuca sativa HOM05D005625 ORTHO05D007564 3.9e-174 615.5 529 60.3
arahy.Tifrunner.gnm1.ann1.I4CKLR Arachis hypogaea HOM05D005625 ORTHO05D007564 6.6e-174 614.8 542 58.1
HPP92_026650 Vanilla planifolia HOM05D005625 ORTHO05D007564 3.6e-172 609.0 549 56.5
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 1.4e-171 607.1 449 66.1
BolC6t39611H Brassica oleracea HOM05D005625 ORTHO05D007564 7.1e-168 594.7 534 56.0
BraA07t31336Z Brassica rapa HOM05D005625 ORTHO05D007564 7.8e-167 591.3 534 55.8
A07p37730 Brassica napus HOM05D005625 ORTHO05D007564 5.1e-166 588.6 534 55.4
SGA_v2.0_scaffold118G32606 Striga asiatica HOM05D005625 ORTHO05D007564 1.5e-165 587.0 542 57.2
BcaC08g46580 Brassica carinata HOM05D005625 ORTHO05D007564 1.2e-164 583.9 532 55.3
unitig_578.g16118 Utricularia gibba HOM05D005625 ORTHO05D007564 3.8e-161 572.4 528 54.7
C06p45600 Brassica napus HOM05D005625 ORTHO05D007564 1.9e-157 560.1 534 53.4
Ca_07151_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 7.3e-157 558.1 525 54.9
Cpa.g.sc21.80 Carica papaya HOM05D005625 ORTHO05D007564 1.4e-155 553.9 446 62.1
Ca_00793_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 1.3e-150 537.3 525 53.5
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 1.1e-144 517.7 401 62.8
Peaxi162Scf00078g00533 Petunia axillaris HOM05D005625 ORTHO05D007564 2.4e-144 516.5 397 63.0
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 1.8e-142 510.4 539 50.1
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 2.1e-140 503.4 543 48.3
Nitab4.5_0001155g0010 Nicotiana tabacum HOM05D005625 ORTHO05D007564 3.1e-139 499.6 403 61.5
vmacro11035 Vaccinium macrocarpon HOM05D005625 ORTHO05D007564 6.4e-137 491.9 566 51.1
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 8.7e-134 481.5 532 46.4
SHI16719 Sapria himalayana HOM05D005625 ORTHO05D007564 7.4e-117 425.2 501 46.9
Sabra15G0066200 Salix brachista HOM05D005625 ORTHO05D007564 2.5e-112 410.2 344 59.6
Sabra15G0066000 Salix brachista HOM05D005625 ORTHO05D007564 9.4e-112 408.3 344 59.3
Atru.chr11.652 Acer truncatum HOM05D005625 ORTHO05D007564 4.1e-107 392.9 286 68.9
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 9.1e-107 391.7 551 40.7
AagrBONN_evm.TU.Sc2ySwM_344.4267 Anthoceros agrestis HOM05D005625 ORTHO05D007564 1.1e-104 384.8 464 44.6
CBR_g2823 Chara braunii HOM05D005625 ORTHO05D007564 5.7e-93 345.9 552 37.9
ClCG03G011780 Citrullus lanatus HOM05D005625 ORTHO05D007564 6.3e-92 342.4 288 60.1
SEGI_17074 Sequoiadendron giganteum HOM05D005625 ORTHO05D007564 1.0e-86 325.1 294 58.8
AagrBONN_evm.TU.Sc2ySwM_344.5166 Anthoceros agrestis HOM05D005625 ORTHO05D007564 4.2e-80 303.1 390 42.8
FAN08G2869 Fragaria x ananassa HOM05D005625 ORTHO05D007564 4.7e-71 273.1 202 69.3
PRCOL_00002543 Prasinoderma coloniale HOM05D005625 ORTHO05D007564 7.8e-66 255.8 561 31.7
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 1.5e-64 251.5 571 31.3
Nitab4.5_0000213g0250 Nicotiana tabacum HOM05D005625 ORTHO05D007564 1.5e-64 251.5 212 58.5
Cre02.g095113 Chlamydomonas reinhardtii HOM05D005625 ORTHO05D007564 6.6e-57 226.1 531 31.3
PGSC0003DMG400019987 Solanum tuberosum HOM05D005625 ORTHO05D007564 1.6e-55 221.5 162 66.7
ClCG03G011750 Citrullus lanatus HOM05D005625 ORTHO05D007564 1.3e-52 211.8 150 66.0
Os05g0105300 Oryza sativa ssp. japonica HOM05D005625 ORTHO05D007564 6.8e-46 189.5 170 54.1
Peaxi162Scf00078g00534 Petunia axillaris HOM05D005625 ORTHO05D007564 2.6e-45 187.6 135 66.7
Nitab4.5_0000213g0260 Nicotiana tabacum HOM05D005625 ORTHO05D007564 7.1e-43 179.5 130 66.9
Glyma.15G127567 Glycine max HOM05D005625 ORTHO05D007564 6.0e-42 176.4 138 63.8
Glyma.15G127633 Glycine max HOM05D005625 ORTHO05D007564 1.9e-32 144.8 123 56.9
Solyc11g042500.3 Solanum lycopersicum HOM05D005625 ORTHO05D007564 3.1e-30 137.5 99 71.7
Hund08558 Selenicereus undatus HOM05D005625 ORTHO05D007564 5.3e-30 136.7 85 76.5
Nitab4.5_0001155g0020 Nicotiana tabacum HOM05D005625 ORTHO05D007564 9.0e-30 136.0 113 60.2
BcaB04g17633 Brassica carinata HOM05D005625 ORTHO05D007564 8.4e-28 129.4 100 63.0
TPR.G26547 Trifolium pratense HOM05D005625 ORTHO05D022022 1.2e-18 99.0 152 36.8
C02p28970 Brassica napus HOM05D005625 ORTHO05D022022 1.1e-14 85.9 72 58.3
BolC2t08946H Brassica oleracea HOM05D005625 ORTHO05D022022 4.0e-14 84.0 71 57.7
PSO478G1928 Papaver somniferum HOM05D005625 ORTHO05D002418 2.0e-13 81.6 74 63.5
ClCG03G011760 Citrullus lanatus HOM05D000004 ORTHO05D000002 5.8e-13 80.1 75 49.3
arahy.Tifrunner.gnm1.ann1.6SNM9F Arachis hypogaea HOM05D005625 ORTHO05D007564 7.6e-13 79.7 115 44.3
A02p17310 Brassica napus HOM05D005625 ORTHO05D022022 7.6e-13 79.7 71 54.9
BraA02t06779Z Brassica rapa HOM05D005625 ORTHO05D022022 7.6e-13 79.7 71 54.9
arahy.Tifrunner.gnm1.ann1.GWKT0Q Arachis hypogaea HOM05D005625 ORTHO05D007564 3.2e-11 74.3 114 39.5
Lsat_1_v5_gn_3_107600 Lactuca sativa HOM05D000629 ORTHO05D013393 5.3e-06 57.0 70 41.4
arahy.Tifrunner.gnm1.ann1.QJV3PU Arachis hypogaea HOM05D003356 ORTHO05D086117 6.9e-06 56.6 76 40.8
BolC2t08947H Brassica oleracea HOM05D005625 ORTHO05D022022 6.9e-06 56.6 87 42.5


User provided reference genes

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