Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2859 Papaver somniferum HOM05D005998 ORTHO05D007664 1.1e-126 456.8 259 100.0
PSO017G5443 Papaver somniferum HOM05D005998 ORTHO05D007664 2.0e-51 206.8 298 55.0
PSO541G3130 Papaver somniferum HOM05D005998 ORTHO05D007664 5.7e-51 205.3 297 52.9
PSO017G0196 Papaver somniferum HOM05D005998 ORTHO05D007664 1.1e-49 201.1 253 55.7
PSO837G0060 Papaver somniferum HOM05D005998 ORTHO05D007664 1.0e-47 194.5 291 54.0
PSO675G7594 Papaver somniferum HOM05D005998 ORTHO05D007664 8.5e-47 191.4 239 59.4
PSO837G0015 Papaver somniferum HOM05D005998 ORTHO05D007664 7.2e-46 188.3 303 51.8
PSO675G8174 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-43 179.9 301 50.5
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 1.8e-41 173.7 237 57.0
PSO675G6053 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-40 169.9 276 50.0
PSO218G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 5.9e-40 168.7 233 54.9
PSO340G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 5.9e-40 168.7 233 54.9
PSO675G6885 Papaver somniferum HOM05D005998 ORTHO05D007664 5.9e-40 168.7 233 54.9
PSO017G6716 Papaver somniferum HOM05D005998 ORTHO05D007664 5.3e-33 145.6 274 49.3
PSO573G0016 Papaver somniferum HOM05D005998 ORTHO05D007664 4.7e-29 132.5 170 54.7
PSO017G0268 Papaver somniferum HOM05D005998 ORTHO05D007664 1.2e-27 127.9 163 46.6
PSO017G7250 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-27 126.7 232 52.6
PSO017G4719 Papaver somniferum HOM05D005998 ORTHO05D007664 3.4e-27 126.3 171 43.9
PSO017G6639 Papaver somniferum HOM05D005998 ORTHO05D007664 1.3e-26 124.4 162 43.2
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 2.2e-23 113.6 231 42.4
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 1.2e-21 107.8 231 49.4
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 1.6e-21 107.5 240 47.9
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 1.6e-21 107.5 240 47.9
Thecc.01G205300 Theobroma cacao HOM05D005998 ORTHO05D007664 6.1e-21 105.5 230 47.0
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 8.0e-21 105.1 234 45.7
PSO675G5104 Papaver somniferum HOM05D005998 ORTHO05D007664 1.8e-20 104.0 183 51.4
AT3G07550 Arabidopsis thaliana HOM05D005998 ORTHO05D007664 2.0e-19 100.5 230 45.2
PSO541G0922 Papaver somniferum HOM05D005998 ORTHO05D007664 3.4e-19 99.8 154 56.5
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 3.4e-19 99.8 244 44.7
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 3.4e-19 99.8 246 33.3
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 5.7e-19 99.0 230 45.7
EL10Ac5g10571 Beta vulgaris HOM05D005998 ORTHO05D007664 9.8e-19 98.2 224 34.4
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 1.3e-18 97.8 230 46.5
AL3G18890 Arabidopsis lyrata HOM05D005998 ORTHO05D007664 1.3e-18 97.8 230 45.2
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 2.2e-18 97.1 241 43.2
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 6.3e-18 95.5 230 33.5
PSO017G2023 Papaver somniferum HOM05D005998 ORTHO05D007664 1.1e-17 94.7 239 41.8
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 1.4e-17 94.4 230 43.9
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 1.8e-17 94.0 229 40.6
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 1.8e-17 94.0 237 42.6
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 2.4e-17 93.6 230 41.7
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 7.0e-17 92.0 228 43.4
CARHR082230 Cardamine hirsuta HOM05D005998 ORTHO05D007664 9.1e-17 91.7 230 43.9
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 1.2e-16 91.3 230 41.3
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 1.6e-16 90.9 228 43.0
Carub.0003s0710 Capsella rubella HOM05D005998 ORTHO05D007664 3.5e-16 89.7 246 41.5
PGR083G1807 Punica granatum HOM05D005998 ORTHO05D007664 3.5e-16 89.7 230 45.2
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 4.5e-16 89.4 230 43.5
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 1.3e-15 87.8 236 42.4
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 1.7e-15 87.4 231 45.0
CAN.G181.48 Capsicum annuum HOM05D005998 ORTHO05D007664 2.3e-15 87.0 238 43.3
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 2.9e-15 86.7 232 31.5
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 2.9e-15 86.7 233 42.9
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 2.9e-15 86.7 236 43.6
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 5.0e-15 85.9 234 31.6
Hma1.2p1_1756F.1_g301020 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 5.0e-15 85.9 230 44.3
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 8.6e-15 85.1 223 46.6
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.5e-14 83.6 168 37.5
HanXRQChr08g0231291 Helianthus annuus HOM05D005998 ORTHO05D007664 2.5e-14 83.6 232 40.9
HanXRQChr08g0231301 Helianthus annuus HOM05D005998 ORTHO05D007664 2.5e-14 83.6 232 40.9
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 4.2e-14 82.8 164 36.6
THA.LOC104819025 Tarenaya hassleriana HOM05D005998 ORTHO05D007664 4.2e-14 82.8 241 41.9
ECA247G3308 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.2e-13 81.3 238 40.8
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 1.2e-13 81.3 230 43.0
TAR362G0769 Trochodendron aralioides HOM05D005998 ORTHO05D007664 1.2e-13 81.3 230 42.2
BcaC05g29548 Brassica carinata HOM05D005998 ORTHO05D007664 1.6e-13 80.9 231 39.8
PSO170G1012 Papaver somniferum HOM05D005998 ORTHO05D007664 1.6e-13 80.9 238 41.6
PSO837G0002 Papaver somniferum HOM05D005998 ORTHO05D007664 2.1e-13 80.5 119 39.5
Nn1g09548 Nelumbo nucifera HOM05D005998 ORTHO05D007664 3.6e-13 79.7 228 42.5
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 1.0e-12 78.2 242 40.5
Cpa.g.sc8.24 Carica papaya HOM05D005998 ORTHO05D007664 1.8e-12 77.4 231 29.9
Manes.13G057500 Manihot esculenta HOM05D005998 ORTHO05D007664 1.8e-12 77.4 229 41.9
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 3.0e-12 76.6 231 42.4
Solyc06g007680.1 Solanum lycopersicum HOM05D005998 ORTHO05D007664 3.0e-12 76.6 236 41.1
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 4.0e-12 76.3 236 41.5
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 1.2e-11 74.7 231 42.9
Nitab4.5_0002641g0010 Nicotiana tabacum HOM05D005998 ORTHO05D007664 1.5e-11 74.3 238 40.8
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 2.0e-11 73.9 221 39.4
Peaxi162Scf00372g00061 Petunia axillaris HOM05D005998 ORTHO05D007664 2.6e-11 73.6 253 38.7
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 3.4e-11 73.2 242 28.9
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 3.4e-11 73.2 144 38.9
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 4.4e-11 72.8 139 38.8
AUR62008051 Chenopodium quinoa HOM05D005998 ORTHO05D007664 2.2e-10 70.5 251 40.2
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 2.2e-10 70.5 167 33.5
BolC5t34631H Brassica oleracea HOM05D005998 ORTHO05D007664 3.7e-10 69.7 237 37.1
PSO017G7049 Papaver somniferum HOM05D005998 ORTHO05D007664 4.9e-10 69.3 154 33.8
Potri.017G056400 Populus trichocarpa HOM05D005998 ORTHO05D007664 6.3e-10 68.9 163 32.5
BcaC05g29549 Brassica carinata HOM05D005998 ORTHO05D007664 1.1e-09 68.2 237 36.7
C05p59770 Brassica napus HOM05D005998 ORTHO05D007664 1.1e-09 68.2 237 36.7
Glyma.07G060100 Glycine max HOM05D005998 ORTHO05D007664 7.0e-09 65.5 83 44.6
Sabra17G0050000 Salix brachista HOM05D005998 ORTHO05D007664 2.0e-08 63.9 82 43.9
HPP92_024394 Vanilla planifolia HOM05D005998 ORTHO05D007664 2.0e-08 63.9 160 33.8
AUR62028626 Chenopodium quinoa HOM05D005998 ORTHO05D007664 4.5e-08 62.8 255 39.2
Medtr8g028140 Medicago truncatula HOM05D005998 ORTHO05D007664 4.5e-08 62.8 83 43.4
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 5.9e-08 62.4 249 37.8
Psat4g158400 Pisum sativum HOM05D005998 ORTHO05D007664 1.0e-07 61.6 81 46.9
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 1.7e-07 60.8 81 44.4
Ca_23566_v3 Cicer arietinum L. HOM05D005998 ORTHO05D007664 2.9e-07 60.1 81 43.2
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 3.9e-07 59.7 78 47.4
TPR.G5126 Trifolium pratense HOM05D005998 ORTHO05D007664 6.6e-07 58.9 81 43.2
Eucgr.H00683 Eucalyptus grandis HOM05D005998 ORTHO05D007664 1.1e-06 58.2 243 35.4
ECA232G4734 Erigeron canadensis HOM05D005998 ORTHO05D007664 4.3e-06 56.2 228 37.7
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 4.3e-06 56.2 223 38.1


User provided reference genes

Program Settings