Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 2.8e-112 408.7 215 100.0
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 6.9e-95 350.9 183 98.4
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 4.4e-81 305.1 218 74.3
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 3.1e-79 298.9 218 73.4
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 6.5e-77 291.2 215 71.2
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 1.9e-76 289.7 202 74.3
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 3.2e-76 288.9 218 69.3
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 7.2e-76 287.7 213 70.0
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 7.2e-76 287.7 214 70.1
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 9.4e-76 287.3 213 70.4
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 9.4e-76 287.3 218 72.0
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 2.1e-75 286.2 191 76.4
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 2.7e-75 285.8 213 70.0
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 8.0e-75 284.3 213 71.8
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 2.3e-74 282.7 215 69.3
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 4.0e-74 282.0 219 67.6
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 5.2e-74 281.6 213 68.5
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 6.8e-74 281.2 215 67.9
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 8.8e-74 280.8 219 68.9
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 1.5e-73 280.0 213 69.0
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 1.5e-73 280.0 213 67.1
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 1.5e-73 280.0 220 69.5
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 2.0e-73 279.6 218 71.1
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 2.0e-73 279.6 216 69.0
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 3.4e-73 278.9 218 70.6
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 3.4e-73 278.9 218 69.3
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 3.4e-73 278.9 215 69.3
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 3.4e-73 278.9 226 66.4
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 4.4e-73 278.5 239 64.9
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 5.7e-73 278.1 213 66.2
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 5.7e-73 278.1 218 68.8
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 5.7e-73 278.1 219 66.7
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 5.7e-73 278.1 241 64.7
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 7.5e-73 277.7 222 68.9
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 7.5e-73 277.7 216 69.0
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 7.5e-73 277.7 216 69.0
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 7.5e-73 277.7 202 70.3
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 7.5e-73 277.7 210 67.6
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 2.8e-72 275.8 218 68.8
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 2.8e-72 275.8 216 67.1
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 2.8e-72 275.8 219 66.7
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 3.7e-72 275.4 215 66.5
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 4.8e-72 275.0 213 66.2
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 1.1e-71 273.9 217 65.4
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 1.1e-71 273.9 221 66.1
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 1.4e-71 273.5 221 67.9
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 1.8e-71 273.1 220 68.2
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 2.4e-71 272.7 204 67.6
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 3.1e-71 272.3 219 68.0
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 9.1e-71 270.8 213 65.7
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 1.2e-70 270.4 226 64.6
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 1.6e-70 270.0 218 68.3
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 2.7e-70 269.2 218 65.6
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 4.5e-70 268.5 211 65.9
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 4.5e-70 268.5 211 65.9
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 4.5e-70 268.5 223 65.0
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 4.5e-70 268.5 221 65.2
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 1.0e-69 267.3 221 67.0
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 1.7e-69 266.5 218 66.5
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 6.5e-69 264.6 217 64.1
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 1.1e-68 263.8 224 65.2
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 2.5e-68 262.7 212 65.1
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 1.6e-67 260.0 167 76.6
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 2.1e-67 259.6 213 62.4
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 8.0e-67 257.7 227 61.2
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 1.4e-66 256.9 217 63.1
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 2.3e-66 256.1 210 64.3
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 4.0e-66 255.4 167 76.6
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 5.2e-66 255.0 220 65.9
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 5.2e-66 255.0 216 64.4
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 6.8e-66 254.6 220 65.9
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 6.8e-66 254.6 217 66.8
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 3.4e-65 252.3 213 61.5
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 2.8e-64 249.2 217 60.4
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 5.4e-63 245.0 167 72.5
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 1.2e-62 243.8 167 70.1
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 3.5e-62 242.3 213 63.4
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 1.3e-61 240.4 155 77.4
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 5.0e-61 238.4 170 68.8
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 5.0e-61 238.4 206 62.1
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 1.5e-60 236.9 193 62.7
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 2.5e-60 236.1 221 60.2
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 2.0e-57 226.5 225 56.4
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 5.4e-55 218.4 219 55.3
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 5.4e-55 218.4 152 78.9
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 8.6e-53 211.1 213 56.3
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 2.5e-52 209.5 138 71.0
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 2.1e-51 206.5 141 70.2
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 2.3e-45 186.4 160 68.1
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 4.4e-41 172.2 140 69.3
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 5.8e-41 171.8 140 68.6
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 6.4e-40 168.3 136 58.8
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 2.4e-39 166.4 213 48.4
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 8.1e-27 124.8 95 69.5
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 3.1e-26 122.9 83 77.1
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 3.1e-26 122.9 83 77.1
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 8.1e-19 98.2 212 34.0
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 4.0e-18 95.9 62 83.9
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 6.9e-18 95.1 59 74.6
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 2.4e-15 86.7 73 46.6
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 6.7e-13 78.6 153 36.6
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 4.8e-11 72.4 202 34.2
Sc15g0005340 Simmondsia chinensis HOM05D007406 ORTHO05D009434 2.4e-10 70.1 81 55.6


User provided reference genes

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