Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2516 Papaver somniferum HOM05D005710 ORTHO05D004657 5.7e-220 767.7 516 100.0
PSO478G1813 Papaver somniferum HOM05D005710 ORTHO05D004657 1.9e-191 672.9 518 89.8
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 9.6e-50 202.2 398 42.2
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 6.2e-49 199.5 400 40.2
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 9.0e-48 195.7 404 41.1
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 2.6e-47 194.1 413 38.7
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 4.4e-47 193.4 382 41.9
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 1.1e-45 188.7 390 40.5
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 1.1e-45 188.7 396 38.6
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 2.1e-44 184.5 383 40.7
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 2.1e-44 184.5 358 39.4
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 2.7e-44 184.1 408 37.5
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 3.5e-44 183.7 383 37.9
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 4.6e-44 183.3 377 40.3
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 3.0e-43 180.6 401 37.7
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 3.9e-43 180.3 386 37.0
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 3.9e-43 180.3 381 38.3
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 5.1e-43 179.9 404 39.1
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 5.1e-43 179.9 278 44.6
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 8.7e-43 179.1 408 37.7
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 1.1e-42 178.7 386 38.9
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 4.3e-42 176.8 399 37.1
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 4.3e-42 176.8 375 40.5
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 5.6e-42 176.4 422 36.7
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 4.8e-41 173.3 382 36.4
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 4.8e-41 173.3 278 45.3
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 8.1e-41 172.6 302 42.7
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 1.1e-40 172.2 413 36.6
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 1.8e-40 171.4 364 39.6
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 2.4e-40 171.0 397 37.0
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 9.9e-39 165.6 350 39.4
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 2.2e-38 164.5 400 33.0
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 1.4e-37 161.8 352 39.5
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 1.6e-36 158.3 287 42.9
Aqoxy3G03578 Aquilegia oxysepala HOM05D005710 ORTHO05D004657 7.9e-36 156.0 333 39.0
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 1.0e-35 155.6 394 37.1
Lalb_Chr17g0337061 Lupinus albus HOM05D005710 ORTHO05D004657 1.0e-35 155.6 384 35.2
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 1.8e-35 154.8 301 40.5
Cc07_g04040 Coffea canephora HOM05D005710 ORTHO05D004657 2.3e-35 154.5 388 36.9
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 6.7e-35 152.9 385 38.7
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 5.6e-34 149.8 263 46.0
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 5.6e-34 149.8 263 46.0
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 5.6e-34 149.8 384 36.2
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 7.4e-34 149.4 395 37.5
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea HOM05D005710 ORTHO05D004657 2.1e-33 147.9 389 37.8
Lj1g0027832 Lotus japonicus HOM05D005710 ORTHO05D004657 2.1e-33 147.9 384 34.1
Lsat_1_v5_gn_3_98801 Lactuca sativa HOM05D005710 ORTHO05D004657 8.1e-33 146.0 407 33.4
PGR004G2722 Punica granatum HOM05D005710 ORTHO05D004657 1.8e-32 144.8 261 43.7
Migut.K01286 Erythranthe guttata HOM05D005710 ORTHO05D004657 5.3e-32 143.3 392 40.8
Ah.10g032010 Amaranthus hybridus HOM05D005710 ORTHO05D004657 3.8e-30 137.1 405 33.6
Glyma.08G242700 Glycine max HOM05D005710 ORTHO05D004657 6.5e-30 136.3 373 36.7
Manes.02G052100 Manihot esculenta HOM05D005710 ORTHO05D004657 6.5e-30 136.3 421 34.4
Psat3g200880 Pisum sativum HOM05D005710 ORTHO05D004657 8.4e-30 136.0 287 39.7
Phvul.008G035100 Phaseolus vulgaris HOM05D005710 ORTHO05D004657 2.5e-29 134.4 284 38.4
AUR62042434 Chenopodium quinoa HOM05D005710 ORTHO05D004657 5.5e-29 133.3 185 45.4
AUR62018163 Chenopodium quinoa HOM05D005710 ORTHO05D004657 7.1e-29 132.9 286 36.7
EL10Ac2g03101 Beta vulgaris HOM05D005710 ORTHO05D004657 9.3e-29 132.5 302 37.7
Glyma.18G264900 Glycine max HOM05D005710 ORTHO05D004657 1.6e-28 131.7 387 33.9
VMungo1383G0251 Vigna mungo HOM05D005710 ORTHO05D004657 2.7e-28 131.0 384 33.3
Nitab4.5_0008213g0040 Nicotiana tabacum HOM05D005710 ORTHO05D004657 3.5e-28 130.6 382 33.0
Nitab4.5_0000565g0150 Nicotiana tabacum HOM05D005710 ORTHO05D004657 1.0e-27 129.0 389 32.4
MELO3C022025.2 Cucumis melo HOM05D005710 ORTHO05D004657 6.7e-27 126.3 394 34.5
Eucgr.I01977 Eucalyptus grandis HOM05D005710 ORTHO05D004657 8.7e-27 125.9 389 35.0
Thhalv10027716m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 8.7e-27 125.9 298 36.2
Medtr7g012940 Medicago truncatula HOM05D005710 ORTHO05D004657 8.7e-27 125.9 279 38.4
HanXRQChr15g0473071 Helianthus annuus HOM05D005710 ORTHO05D004657 1.5e-26 125.2 177 49.2
CsaV3_5G038440 Cucumis sativus L. HOM05D005710 ORTHO05D004657 1.9e-26 124.8 402 32.8
SalBow7G3425 Salvia bowleyana HOM05D005710 ORTHO05D004657 2.5e-26 124.4 382 34.3
Sc11g0004700 Simmondsia chinensis HOM05D005710 ORTHO05D004657 3.3e-26 124.0 407 32.4
Sed0007565 Sechium edule HOM05D005710 ORTHO05D004657 4.3e-26 123.6 404 32.9
SGA_v2.0_scaffold52G19180 Striga asiatica HOM05D005710 ORTHO05D004657 4.3e-26 123.6 281 38.8
MBI16_g30408_MAGBIO Magnolia biondii HOM05D001913 ORTHO05D001880 5.7e-26 123.2 271 38.4
Haze_14462 Corylus avellana HOM05D005710 ORTHO05D004657 7.4e-26 122.9 409 34.2
SGA_v2.0_scaffold4G02406 Striga asiatica HOM05D005710 ORTHO05D004657 7.4e-26 122.9 256 40.6
TPR.G33463 Trifolium pratense HOM05D005710 ORTHO05D004657 7.4e-26 122.9 274 37.6
ClCG11G004670 Citrullus lanatus HOM05D005710 ORTHO05D004657 1.3e-25 122.1 251 36.7
CAN.G206.210 Capsicum annuum HOM05D005710 ORTHO05D004657 2.8e-25 120.9 386 32.1
ECA246G0940 Erigeron canadensis HOM05D005710 ORTHO05D004657 3.7e-25 120.6 277 38.3
Hund13162 Selenicereus undatus HOM05D005710 ORTHO05D004657 4.8e-25 120.2 287 36.9
THA.LOC104823892 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 1.1e-24 119.0 266 38.3
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 2.4e-24 117.9 288 38.5
Sp2g17910 Schrenkiella parvula HOM05D005710 ORTHO05D004657 6.9e-24 116.3 284 34.5
A06p39970 Brassica napus HOM05D005710 ORTHO05D004657 9.0e-24 115.9 388 32.5
BraA06t26912Z Brassica rapa HOM05D005710 ORTHO05D004657 9.0e-24 115.9 388 32.5
Aa31LG2G3970 Aethionema arabicum HOM05D005710 ORTHO05D004657 3.4e-23 114.0 287 35.5
Nn4g23370 Nelumbo nucifera HOM05D005710 ORTHO05D004657 3.4e-23 114.0 334 34.1
CDE07G0246 Ceratophyllum demersum HOM05D001913 ORTHO05D001880 4.5e-23 113.6 166 46.4
Thhalv10003979m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 4.5e-23 113.6 294 35.0
Peaxi162Scf00166g00643 Petunia axillaris HOM05D005710 ORTHO05D004657 5.8e-23 113.2 393 32.6
Solyc02g088660.4 Solanum lycopersicum HOM05D005710 ORTHO05D004657 7.6e-23 112.8 172 46.5
A02p36530 Brassica napus HOM05D005710 ORTHO05D004657 3.8e-22 110.5 158 48.1
BraA02t08649Z Brassica rapa HOM05D005710 ORTHO05D004657 3.8e-22 110.5 158 48.1
Hund15554 Selenicereus undatus HOM05D005710 ORTHO05D004657 3.2e-21 107.5 291 32.6
AT3G29310 Arabidopsis thaliana HOM05D005710 ORTHO05D004657 4.2e-21 107.1 173 44.5
BcaC03g17571 Brassica carinata HOM05D005710 ORTHO05D004657 5.5e-21 106.7 282 35.8
C02p55500 Brassica napus HOM05D005710 ORTHO05D004657 9.3e-21 105.9 282 35.8
BolC2t11608H Brassica oleracea HOM05D005710 ORTHO05D004657 9.3e-21 105.9 282 35.8
THA.LOC104805502 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 9.3e-21 105.9 305 34.4
AL5G19350 Arabidopsis lyrata HOM05D005710 ORTHO05D004657 1.6e-20 105.1 281 36.3
Aa31LG9G16660 Aethionema arabicum HOM05D005710 ORTHO05D004657 2.7e-20 104.4 290 33.4
Zm00001eb352990 Zea mays HOM05D005710 ORTHO05D004657 4.6e-20 103.6 160 41.2
Carub.0005s0802 Capsella rubella HOM05D005710 ORTHO05D004657 1.8e-19 101.7 282 33.0
C07p38200 Brassica napus HOM05D005710 ORTHO05D004657 3.0e-19 100.9 233 37.3
CARHR154030 Cardamine hirsuta HOM05D005710 ORTHO05D004657 1.1e-18 99.0 280 33.9
Os05g0512400 Oryza sativa ssp. japonica HOM05D005710 ORTHO05D004657 1.1e-18 99.0 102 53.9
BcaB07g30084 Brassica carinata HOM05D005710 ORTHO05D004657 2.5e-18 97.8 411 31.6
BcaC08g44413 Brassica carinata HOM05D005710 ORTHO05D004657 2.8e-17 94.4 393 28.5
C06p18500 Brassica napus HOM05D005710 ORTHO05D004657 2.8e-17 94.4 393 28.5
BolC6t37063H Brassica oleracea HOM05D005710 ORTHO05D004657 1.4e-16 92.0 163 39.9
Haze_14452 Corylus avellana HOM05D005710 ORTHO05D004657 9.0e-16 89.4 354 31.6
BcaB02g07987 Brassica carinata HOM05D005710 ORTHO05D004657 1.2e-15 89.0 412 28.9
HPP92_019480 Vanilla planifolia HOM05D005710 ORTHO05D004657 2.0e-15 88.2 202 36.1
Migut.K01288 Erythranthe guttata HOM05D005710 ORTHO05D004657 2.7e-12 77.8 261 35.6
BcaC06g33686 Brassica carinata HOM05D005710 ORTHO05D004657 1.8e-11 75.1 246 32.9
GSVIVG01011503001 Vitis vinifera HOM05D005710 ORTHO05D004657 1.8e-11 75.1 54 63.0
SalBow2G0426 Salvia bowleyana HOM05D005710 ORTHO05D004657 2.0e-10 71.6 103 41.7
Oeu000861.1 Olea europaea HOM05D005710 ORTHO05D004657 9.7e-10 69.3 61 55.7
SEGI_24397 Sequoiadendron giganteum HOM05D005186 ORTHO05D006278 1.3e-09 68.9 131 35.1
Potri.004G124301 Populus trichocarpa HOM05D005710 ORTHO05D004657 4.8e-09 67.0 76 43.4
Lalb_Chr01g0000291 Lupinus albus HOM05D005186 ORTHO05D006278 2.0e-07 61.6 117 37.6
Nitab4.5_0013021g0030 Nicotiana tabacum HOM05D006269 ORTHO05D001487 2.0e-07 61.6 111 36.0
Actinidia20177 Actinidia chinensis HOM05D006269 ORTHO05D001487 3.4e-07 60.8 122 33.6
arahy.Tifrunner.gnm1.ann1.II6FYR Arachis hypogaea HOM05D006269 ORTHO05D001487 3.4e-07 60.8 126 34.1
COL.COLO4_06360 Corchorus olitorius HOM05D006269 ORTHO05D001487 3.4e-07 60.8 195 29.7
ECA238G0955 Erigeron canadensis HOM05D005186 ORTHO05D006278 3.4e-07 60.8 111 34.2
FAN10G2074 Fragaria x ananassa HOM05D006269 ORTHO05D001487 4.5e-07 60.5 136 32.4
FAN10G3724 Fragaria x ananassa HOM05D006269 ORTHO05D001487 4.5e-07 60.5 136 32.4
FAN03G1935 Fragaria x ananassa HOM05D006269 ORTHO05D001487 5.9e-07 60.1 126 34.1
Actinidia10090 Actinidia chinensis HOM05D006269 ORTHO05D001487 1.0e-06 59.3 122 33.6
FAN06G3724 Fragaria x ananassa HOM05D006269 ORTHO05D001487 1.0e-06 59.3 136 31.6
Oeu008674.2 Olea europaea HOM05D006269 ORTHO05D001487 1.0e-06 59.3 123 36.6
Cc02_g38780 Coffea canephora HOM05D006269 ORTHO05D001487 1.3e-06 58.9 112 37.5
RhsimUnG0046700 Rhododendron simsii HOM05D005186 ORTHO05D006278 1.3e-06 58.9 99 35.4
RcHm_v2.0_Chr1g0358421 Rosa chinensis HOM05D006269 ORTHO05D001487 1.3e-06 58.9 136 33.1
SalBow3G1747 Salvia bowleyana HOM05D005710 ORTHO05D004657 1.3e-06 58.9 188 29.3
FAN01G3063 Fragaria x ananassa HOM05D005186 ORTHO05D006278 1.7e-06 58.5 99 36.4
Lalb_Chr19g0140361 Lupinus albus HOM05D005186 ORTHO05D006278 1.7e-06 58.5 113 36.3
Aa31LG1G27630 Aethionema arabicum HOM05D006269 ORTHO05D001487 2.2e-06 58.2 113 32.7
FvH4_7g15690 Fragaria vesca HOM05D006269 ORTHO05D001487 2.2e-06 58.2 139 30.9
FAN10G1701 Fragaria x ananassa HOM05D005186 ORTHO05D006278 2.2e-06 58.2 105 35.2
BcaNung02779 Brassica carinata HOM05D005186 ORTHO05D006278 2.9e-06 57.8 113 33.6
Glyma.09G231200 Glycine max HOM05D005186 ORTHO05D006278 2.9e-06 57.8 102 37.3
Glyma.12G005300 Glycine max HOM05D005186 ORTHO05D006278 2.9e-06 57.8 102 37.3
Phvul.011G006100 Phaseolus vulgaris HOM05D005186 ORTHO05D006278 3.8e-06 57.4 102 37.3
HPP92_008793 Vanilla planifolia HOM05D006269 ORTHO05D001487 3.8e-06 57.4 131 29.0
VMungo1127G0816 Vigna mungo HOM05D005186 ORTHO05D006278 3.8e-06 57.4 102 37.3
BolC3t18705H Brassica oleracea HOM05D005186 ORTHO05D006278 5.0e-06 57.0 115 35.7
Migut.F01178 Erythranthe guttata HOM05D005186 ORTHO05D006278 5.0e-06 57.0 111 32.4
Thhalv10001302m.g Eutrema salsugineum HOM05D006269 ORTHO05D001487 5.0e-06 57.0 114 35.1
FvH4_7g27600 Fragaria vesca HOM05D005186 ORTHO05D006278 5.0e-06 57.0 99 35.4
FAN03G1399 Fragaria x ananassa HOM05D005186 ORTHO05D006278 5.0e-06 57.0 99 35.4
FAN06G2203 Fragaria x ananassa HOM05D006269 ORTHO05D001487 5.0e-06 57.0 136 30.9
FAN06G2498 Fragaria x ananassa HOM05D005186 ORTHO05D006278 5.0e-06 57.0 99 35.4
FAN06G5126 Fragaria x ananassa HOM05D005186 ORTHO05D006278 5.0e-06 57.0 99 35.4
arahy.Tifrunner.gnm1.ann1.YSVF0U Arachis hypogaea HOM05D006269 ORTHO05D001487 6.5e-06 56.6 126 32.5
A01p12890 Brassica napus HOM05D005186 ORTHO05D006278 6.5e-06 56.6 116 35.3
C01p15530 Brassica napus HOM05D005186 ORTHO05D006278 6.5e-06 56.6 116 35.3
BolC1t01505H Brassica oleracea HOM05D005186 ORTHO05D006278 6.5e-06 56.6 116 35.3
BraA01t01233Z Brassica rapa HOM05D005186 ORTHO05D006278 6.5e-06 56.6 116 35.3
Lj3g0017931 Lotus japonicus HOM05D005186 ORTHO05D006278 6.5e-06 56.6 102 37.3
RcHm_v2.0_Chr1g0374461 Rosa chinensis HOM05D005186 ORTHO05D006278 6.5e-06 56.6 99 35.4
Sopen01g039110 Solanum pennellii HOM05D006269 ORTHO05D001487 6.5e-06 56.6 146 30.8
vmacro13212 Vaccinium macrocarpon HOM05D006269 ORTHO05D001487 6.5e-06 56.6 123 32.5
BcaC02g12701 Brassica carinata HOM05D006269 ORTHO05D001487 8.5e-06 56.2 128 33.6
Haze_13870 Corylus avellana HOM05D005186 ORTHO05D006278 8.5e-06 56.2 99 35.4
Manes.14G035500 Manihot esculenta HOM05D005186 ORTHO05D006278 8.5e-06 56.2 127 32.3
QL09p019611 Quercus lobata HOM05D005186 ORTHO05D006278 8.5e-06 56.2 99 34.3


User provided reference genes

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