Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2480 Papaver somniferum HOM05D000462 ORTHO05D005846 4.8e-132 474.6 249 100.0
PSO478G1321 Papaver somniferum HOM05D000462 ORTHO05D005846 2.7e-106 389.0 239 87.9
PSO063G2746 Papaver somniferum HOM05D000462 ORTHO05D005846 1.8e-78 296.6 228 67.1
PSO782G4146 Papaver somniferum HOM05D000462 ORTHO05D005846 1.5e-77 293.5 229 65.9
TAR374G1078 Trochodendron aralioides HOM05D000462 ORTHO05D005846 5.7e-32 142.1 144 52.1
Aqoxy3G02219 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 3.4e-29 132.9 153 43.8
Atru.chr2.1657 Acer truncatum HOM05D000462 ORTHO05D005846 1.7e-28 130.6 148 46.6
Aqoxy7G00268 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 5.5e-27 125.6 169 45.6
Hma1.2p1_0353F.1_g133250 Hydrangea macrophylla HOM05D000462 ORTHO05D005846 7.2e-27 125.2 133 48.9
Nn1g09754 Nelumbo nucifera HOM05D000462 ORTHO05D005846 9.4e-27 124.8 121 53.7
Nn3g19412 Nelumbo nucifera HOM05D000462 ORTHO05D005846 1.6e-26 124.0 149 40.9
Nn3g19417 Nelumbo nucifera HOM05D000462 ORTHO05D005846 1.6e-26 124.0 149 40.9
Dinv43525 Davidia involucrata HOM05D000462 ORTHO05D005846 1.0e-25 121.3 170 41.8
Haze_03590 Corylus avellana HOM05D000462 ORTHO05D005846 3.9e-25 119.4 132 46.2
Actinidia21593 Actinidia chinensis HOM05D000462 ORTHO05D005846 6.7e-25 118.6 164 38.4
CSS0047566 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 1.1e-24 117.9 160 40.6
GSVIVG01019293001 Vitis vinifera HOM05D000462 ORTHO05D005846 1.1e-24 117.9 149 42.3
CSS0030224 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 2.6e-24 116.7 160 40.6
Cfa010675 Carpinus fangiana HOM05D000462 ORTHO05D005846 2.6e-24 116.7 141 42.6
Rhsim07G0047100 Rhododendron simsii HOM05D000462 ORTHO05D005846 1.7e-23 114.0 152 40.1
CSS0023532 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 2.8e-23 113.2 137 44.5
CiPaw.13G054400 Carya illinoinensis HOM05D000462 ORTHO05D005846 3.7e-23 112.8 145 39.3
MD02G1233300 Malus domestica HOM05D000462 ORTHO05D005846 3.7e-23 112.8 127 41.7
MD07G1080300 Malus domestica HOM05D000462 ORTHO05D005846 3.7e-23 112.8 143 39.9
Aqoxy3G00515 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 6.3e-23 112.1 147 44.2
Rhsim07G0047200 Rhododendron simsii HOM05D000462 ORTHO05D005846 6.3e-23 112.1 152 41.4
EL10Ac4g07924 Beta vulgaris HOM05D000462 ORTHO05D005846 3.1e-22 109.8 147 40.8
Migut.N01672 Erythranthe guttata HOM05D000462 ORTHO05D005846 4.1e-22 109.4 163 36.8
Hund26858 Selenicereus undatus HOM05D000462 ORTHO05D005846 7.0e-22 108.6 126 45.2
AUR62031622 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.2e-21 107.8 127 42.5
MELO3C006216.2 Cucumis melo HOM05D000462 ORTHO05D005846 1.2e-21 107.8 132 43.2
RcHm_v2.0_Chr2g0147401 Rosa chinensis HOM05D000462 ORTHO05D005846 1.2e-21 107.8 136 41.9
FAN06G2574 Fragaria x ananassa HOM05D000462 ORTHO05D005846 2.0e-21 107.1 144 41.0
Prupe.2G100300 Prunus persica HOM05D000462 ORTHO05D005846 3.4e-21 106.3 145 37.9
CsaV3_3G009950 Cucumis sativus L. HOM05D000462 ORTHO05D005846 4.5e-21 105.9 132 43.9
EL10Ac4g07923 Beta vulgaris HOM05D000462 ORTHO05D005846 5.9e-21 105.5 134 42.5
Eucgr.E01753 Eucalyptus grandis HOM05D000462 ORTHO05D005846 5.9e-21 105.5 129 41.1
FvH4_6g35581 Fragaria vesca HOM05D000462 ORTHO05D005846 7.7e-21 105.1 143 37.8
FvH4_7g07720 Fragaria vesca HOM05D000462 ORTHO05D005846 7.7e-21 105.1 144 40.3
DCAR_029565 Daucus carota HOM05D000462 ORTHO05D005846 1.3e-20 104.4 141 41.8
ClCG05G002510 Citrullus lanatus HOM05D000462 ORTHO05D005846 1.7e-20 104.0 132 42.4
FAN03G2319 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.7e-20 104.0 139 39.6
FAN10G1386 Fragaria x ananassa HOM05D000462 ORTHO05D005846 2.2e-20 103.6 130 42.3
Peaxi162Scf00907g00221 Petunia axillaris HOM05D000462 ORTHO05D005846 2.9e-20 103.2 154 39.0
Medtr4g083390 Medicago truncatula HOM05D000462 ORTHO05D005846 3.8e-20 102.8 114 46.5
Prupe.2G104700 Prunus persica HOM05D000462 ORTHO05D005846 3.8e-20 102.8 129 39.5
RcHm_v2.0_Chr1g0342371 Rosa chinensis HOM05D000462 ORTHO05D005846 3.8e-20 102.8 123 48.0
PGSC0003DMG400042622 Solanum tuberosum HOM05D000462 ORTHO05D005846 3.8e-20 102.8 133 44.4
Migut.N01673 Erythranthe guttata HOM05D000462 ORTHO05D005846 5.0e-20 102.4 131 41.2
Sed0009318 Sechium edule HOM05D000462 ORTHO05D005846 5.0e-20 102.4 134 41.8
Zm00001eb421100 Zea mays HOM05D000462 ORTHO05D005846 6.5e-20 102.1 122 36.9
DCAR_029563 Daucus carota HOM05D000462 ORTHO05D005846 1.4e-19 100.9 127 41.7
Migut.N01674 Erythranthe guttata HOM05D000462 ORTHO05D005846 1.4e-19 100.9 154 36.4
AUR62020515 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.5e-19 100.1 155 38.1
DCAR_029566 Daucus carota HOM05D000462 ORTHO05D005846 3.2e-19 99.8 141 40.4
Phvul.002G100800 Phaseolus vulgaris HOM05D000462 ORTHO05D005846 3.2e-19 99.8 150 40.7
Prupe.2G104300 Prunus persica HOM05D000462 ORTHO05D005846 3.2e-19 99.8 129 38.0
RcHm_v2.0_Chr2g0147411 Rosa chinensis HOM05D000462 ORTHO05D005846 4.2e-19 99.4 123 42.3
Lsat_1_v5_gn_5_59060 Lactuca sativa HOM05D000462 ORTHO05D005846 1.2e-18 97.8 133 39.1
Sed0002685 Sechium edule HOM05D000462 ORTHO05D005846 1.2e-18 97.8 137 39.4
FvH4_6g35582 Fragaria vesca HOM05D000462 ORTHO05D005846 1.6e-18 97.4 128 39.1
FAN14G2914 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.6e-18 97.4 128 39.1
RcHm_v2.0_Chr1g0342401 Rosa chinensis HOM05D000462 ORTHO05D005846 2.1e-18 97.1 145 39.3
MSTRG.17069 Avicennia marina HOM05D000462 ORTHO05D005846 2.7e-18 96.7 162 36.4
ECA240G2690 Erigeron canadensis HOM05D000462 ORTHO05D005846 4.7e-18 95.9 126 42.1
ClCG05G011530 Citrullus lanatus HOM05D000462 ORTHO05D005846 6.1e-18 95.5 123 40.7
Nitab4.5_0000792g0060 Nicotiana tabacum HOM05D000462 ORTHO05D005846 6.1e-18 95.5 138 42.8
Os04g0386900 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 6.1e-18 95.5 125 36.0
Solyc01g150140.1 Solanum lycopersicum HOM05D000462 ORTHO05D005846 8.0e-18 95.1 125 40.0
Ciclev10033936m.g Citrus clementina HOM05D000462 ORTHO05D005846 2.3e-17 93.6 104 40.4
VMungo0251G1006 Vigna mungo HOM05D000462 ORTHO05D005846 2.3e-17 93.6 153 40.5
CAN.G992.17 Capsicum annuum HOM05D000462 ORTHO05D005846 3.0e-17 93.2 132 37.1
Peaxi162Scf00907g00226 Petunia axillaris HOM05D000462 ORTHO05D005846 3.0e-17 93.2 156 35.9
Solyc01g081400.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 3.0e-17 93.2 135 40.7
Sopen01g032970 Solanum pennellii HOM05D000462 ORTHO05D005846 3.0e-17 93.2 135 40.7
HPP92_014959 Vanilla planifolia HOM05D000462 ORTHO05D005846 3.0e-17 93.2 106 41.5
Nitab4.5_0003123g0040 Nicotiana tabacum HOM05D000462 ORTHO05D011162 3.9e-17 92.8 122 42.6
PGR042G2077 Punica granatum HOM05D000462 ORTHO05D005846 6.7e-17 92.0 141 36.2
Aqoxy2G03796 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 8.8e-17 91.7 119 47.1
Cc00_g12640 Coffea canephora HOM05D000462 ORTHO05D005846 8.8e-17 91.7 128 36.7
Lalb_Chr09g0328911 Lupinus albus HOM05D000462 ORTHO05D005846 8.8e-17 91.7 139 38.1
Lsat_1_v5_gn_7_33120 Lactuca sativa HOM05D000462 ORTHO05D005846 1.1e-16 91.3 125 36.8
RcHm_v2.0_Chr1g0342491 Rosa chinensis HOM05D000462 ORTHO05D005846 1.5e-16 90.9 144 37.5
Sopen01g026530 Solanum pennellii HOM05D000462 ORTHO05D005846 2.0e-16 90.5 159 35.2
PGSC0003DMG400001798 Solanum tuberosum HOM05D000462 ORTHO05D005846 3.3e-16 89.7 135 40.0
PGSC0003DMG400020979 Solanum tuberosum HOM05D000462 ORTHO05D005846 3.3e-16 89.7 135 40.0
FAN14G3081 Fragaria x ananassa HOM05D000462 ORTHO05D005846 4.4e-16 89.4 106 39.6
Peaxi162Scf00245g00411 Petunia axillaris HOM05D000462 ORTHO05D005846 7.4e-16 88.6 140 40.7
arahy.Tifrunner.gnm1.ann1.L6NMZX Arachis hypogaea HOM05D000462 ORTHO05D005846 9.7e-16 88.2 150 38.0
arahy.Tifrunner.gnm1.ann1.AX2FME Arachis hypogaea HOM05D000462 ORTHO05D005846 1.7e-15 87.4 150 38.0
Cc08_g05580 Coffea canephora HOM05D000462 ORTHO05D005846 2.8e-15 86.7 146 36.3
arahy.Tifrunner.gnm1.ann1.ES60GW Arachis hypogaea HOM05D000462 ORTHO05D005846 3.7e-15 86.3 123 39.0
CANSAT78G2521 Cannabis sativa HOM05D000462 ORTHO05D005846 3.7e-15 86.3 104 39.4
CAN.G206.135 Capsicum annuum HOM05D000462 ORTHO05D005846 4.8e-15 85.9 149 34.9
Solyc07g017470.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 8.2e-15 85.1 91 46.2
vmacro13593 Vaccinium macrocarpon HOM05D000462 ORTHO05D005846 8.2e-15 85.1 128 38.3
HanXRQChr01g0021801 Helianthus annuus HOM05D000462 ORTHO05D005846 1.8e-14 84.0 101 39.6
unitig_750.g28427 Utricularia gibba HOM05D000462 ORTHO05D005846 1.8e-14 84.0 139 41.7
unitig_26.g8840 Utricularia gibba HOM05D000462 ORTHO05D005846 3.1e-14 83.2 147 34.7
Oeu013594.1 Olea europaea HOM05D000462 ORTHO05D005846 4.1e-14 82.8 122 34.4
Psat7g132920 Pisum sativum HOM05D000462 ORTHO05D005846 4.1e-14 82.8 113 38.1
SalBow4G0706 Salvia bowleyana HOM05D009568 ORTHO05D011026 4.1e-14 82.8 110 33.6
AUR62015684 Chenopodium quinoa HOM05D000462 ORTHO05D005846 5.3e-14 82.4 144 39.6
HanXRQChr13g0411631 Helianthus annuus HOM05D000462 ORTHO05D005846 5.3e-14 82.4 152 33.6
SalBow4G0191 Salvia bowleyana HOM05D009568 ORTHO05D011026 5.3e-14 82.4 110 33.6
TPR.G34026 Trifolium pratense HOM05D000462 ORTHO05D005846 5.3e-14 82.4 123 39.0
Sc02g0004850 Simmondsia chinensis HOM05D000462 ORTHO05D005846 7.0e-14 82.0 107 39.3
unitig_749.g14241 Utricularia gibba HOM05D000462 ORTHO05D005846 7.0e-14 82.0 142 37.3
arahy.Tifrunner.gnm1.ann1.62DZ2D Arachis hypogaea HOM05D000462 ORTHO05D005846 1.2e-13 81.3 105 41.0
arahy.Tifrunner.gnm1.ann1.XCU387 Arachis hypogaea HOM05D000462 ORTHO05D005846 1.6e-13 80.9 123 36.6
AUR62020518 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.6e-13 80.9 158 36.7
SalBow4G2124 Salvia bowleyana HOM05D000462 ORTHO05D005846 2.6e-13 80.1 169 33.1
Oeu039097.1 Olea europaea HOM05D000462 ORTHO05D005846 3.5e-13 79.7 128 32.8
AUR62031619 Chenopodium quinoa HOM05D000462 ORTHO05D005846 4.5e-13 79.3 175 34.9
SalBow4G2827 Salvia bowleyana HOM05D000462 ORTHO05D005846 4.5e-13 79.3 169 33.1
Nitab4.5_0006461g0020 Nicotiana tabacum HOM05D000462 ORTHO05D005846 7.7e-13 78.6 96 44.8
SalBow4G1864 Salvia bowleyana HOM05D000462 ORTHO05D005846 1.0e-12 78.2 123 37.4
SalBow4G3150 Salvia bowleyana HOM05D000462 ORTHO05D005846 1.0e-12 78.2 123 37.4
Glyma.07G224100 Glycine max HOM05D000462 ORTHO05D005846 2.2e-12 77.0 78 50.0
Cpa.g.sc73.65 Carica papaya HOM05D000462 ORTHO05D005846 2.9e-12 76.6 93 38.7
ECA236G1772 Erigeron canadensis HOM05D000462 ORTHO05D005846 6.5e-12 75.5 122 35.2
SGA_v2.0_scaffold4G02224 Striga asiatica HOM05D000462 ORTHO05D005846 8.5e-12 75.1 161 30.4
CAN.G992.16 Capsicum annuum HOM05D000462 ORTHO05D005846 1.1e-11 74.7 96 43.8
Nitab4.5_0000050g0130 Nicotiana tabacum HOM05D000462 ORTHO05D005846 1.5e-11 74.3 117 36.8
Cc08_g05570 Coffea canephora HOM05D000462 ORTHO05D005846 2.5e-11 73.6 120 36.7
FAN10G1699 Fragaria x ananassa HOM05D000462 ORTHO05D005846 9.4e-11 71.6 79 43.0
RcHm_v2.0_Chr1g0342511 Rosa chinensis HOM05D000462 ORTHO05D005846 2.1e-10 70.5 108 38.9
Peaxi162Scf00104g00047 Petunia axillaris HOM05D000462 ORTHO05D005846 2.7e-10 70.1 111 36.9
CDE03G0429 Ceratophyllum demersum HOM05D000462 ORTHO05D005846 6.1e-10 68.9 68 44.1
Ca_18787_v3 Cicer arietinum L. HOM05D000462 ORTHO05D005846 1.0e-09 68.2 88 40.9
AUR62031621 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.4e-09 67.8 99 39.4
Cc08_g05560 Coffea canephora HOM05D000462 ORTHO05D005846 3.0e-09 66.6 139 33.8
Aqoxy5G02385 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 5.2e-09 65.9 111 38.7
FAN06G0093 Fragaria x ananassa HOM05D000462 ORTHO05D005846 6.7e-09 65.5 107 38.3
AUR62015689 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.2e-08 64.7 124 34.7
QL11p039132 Quercus lobata HOM05D000823 ORTHO05D000088 2.2e-07 60.5 95 32.6
Aqoxy5G02746 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 3.7e-07 59.7 106 36.8
SEGI_17863 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 3.7e-07 59.7 93 36.6
Cpa.g.c42681 Carica papaya HOM05D000462 ORTHO05D005846 8.2e-07 58.5 65 40.0
SEGI_23984 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 1.1e-06 58.2 102 33.3
Aqoxy3G01422 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 2.4e-06 57.0 87 40.2
Peaxi162Scf01016g00003 Petunia axillaris HOM05D000462 ORTHO05D005846 2.4e-06 57.0 99 31.3
SEGI_02922 Sequoiadendron giganteum HOM05D000823 ORTHO05D005846 2.4e-06 57.0 72 41.7


User provided reference genes

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