Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 2.5e-136 488.8 251 100.0
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 5.2e-126 454.5 262 91.6
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 1.8e-73 280.0 258 59.7
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 5.7e-72 275.0 197 70.1
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 7.4e-72 274.6 248 62.5
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 2.1e-71 273.1 193 73.1
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 3.7e-71 272.3 241 63.1
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 3.7e-71 272.3 193 73.1
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 1.1e-70 270.8 252 61.1
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 1.1e-70 270.8 240 61.2
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 1.4e-70 270.4 249 58.6
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 3.1e-70 269.2 240 60.8
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 4.1e-70 268.9 240 61.2
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 6.9e-70 268.1 238 61.8
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 6.9e-70 268.1 249 61.4
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 9.0e-70 267.7 200 69.0
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 9.0e-70 267.7 252 60.7
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 1.2e-69 267.3 233 62.2
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 1.5e-69 266.9 168 76.2
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 2.6e-69 266.2 201 67.2
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 3.4e-69 265.8 192 66.7
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 5.8e-69 265.0 232 62.9
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 5.8e-69 265.0 184 69.0
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 5.8e-69 265.0 251 58.6
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 7.6e-69 264.6 200 68.0
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 1.0e-68 264.2 186 68.3
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 1.3e-68 263.8 243 59.7
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 1.7e-68 263.5 165 78.2
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 2.9e-68 262.7 240 58.3
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 5.0e-68 261.9 227 60.4
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 5.0e-68 261.9 196 69.4
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 6.5e-68 261.5 199 67.3
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 6.5e-68 261.5 207 64.7
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 6.5e-68 261.5 204 68.6
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 8.4e-68 261.2 204 65.2
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.1e-67 260.8 229 61.6
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 3.2e-67 259.2 193 71.0
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 4.2e-67 258.8 246 60.6
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 5.5e-67 258.5 245 59.2
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 9.3e-67 257.7 173 72.3
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 9.3e-67 257.7 227 60.4
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 9.3e-67 257.7 246 58.5
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 9.3e-67 257.7 189 67.7
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 1.2e-66 257.3 230 61.3
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 1.6e-66 256.9 168 73.2
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 6.1e-66 255.0 197 66.0
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 6.1e-66 255.0 192 66.1
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 7.9e-66 254.6 192 66.7
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 3.0e-65 252.7 190 66.8
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 3.0e-65 252.7 190 66.8
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 5.1e-65 251.9 173 69.9
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 5.1e-65 251.9 192 68.8
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 5.1e-65 251.9 243 57.6
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 5.1e-65 251.9 189 66.7
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 6.7e-65 251.5 231 60.2
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 6.7e-65 251.5 235 59.6
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 6.7e-65 251.5 190 66.8
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 8.7e-65 251.1 171 69.6
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 8.7e-65 251.1 189 66.1
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 8.7e-65 251.1 205 63.4
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 8.7e-65 251.1 180 70.6
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 1.1e-64 250.8 258 52.7
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 1.1e-64 250.8 190 66.3
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 1.1e-64 250.8 225 60.9
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 1.1e-64 250.8 184 67.9
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 1.9e-64 250.0 258 52.7
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 1.9e-64 250.0 258 52.7
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 2.5e-64 249.6 258 52.7
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 3.3e-64 249.2 193 69.4
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 4.3e-64 248.8 212 65.1
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 4.3e-64 248.8 190 64.2
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 5.7e-64 248.4 158 76.6
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 7.4e-64 248.1 238 56.3
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 9.7e-64 247.7 238 55.9
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 9.7e-64 247.7 238 55.9
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 9.7e-64 247.7 264 54.9
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 9.7e-64 247.7 264 54.9
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 1.3e-63 247.3 199 61.8
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 1.3e-63 247.3 198 64.6
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 2.2e-63 246.5 211 64.0
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 2.8e-63 246.1 200 64.0
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 2.4e-62 243.0 238 55.0
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 2.4e-62 243.0 238 55.0
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 3.1e-62 242.7 225 60.4
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 3.1e-62 242.7 196 61.2
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 4.1e-62 242.3 192 63.5
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 9.0e-62 241.1 192 63.5
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 1.2e-61 240.7 172 65.7
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 1.2e-61 240.7 172 65.7
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 1.5e-61 240.4 190 61.1
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 2.0e-61 240.0 164 69.5
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 1.3e-60 237.3 153 73.9
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 3.8e-60 235.7 206 57.3
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 8.5e-60 234.6 175 62.3
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 2.5e-59 233.0 234 55.1
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 7.2e-59 231.5 144 78.5
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 2.1e-58 229.9 245 52.2
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 2.1e-58 229.9 185 64.9
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 2.7e-58 229.6 225 56.4
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 3.6e-58 229.2 196 60.7
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 7.9e-58 228.0 226 55.3
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 2.3e-57 226.5 174 63.2
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 3.0e-57 226.1 187 64.2
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 1.5e-56 223.8 226 54.4
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 5.7e-56 221.9 208 56.7
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 1.5e-53 213.8 236 51.7
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 8.5e-52 208.0 205 60.0
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 8.5e-52 208.0 206 59.2
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.4e-49 200.7 208 55.3
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 4.4e-48 195.7 156 66.7
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 6.3e-47 191.8 155 55.5
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 4.1e-46 189.1 120 75.0
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 7.0e-46 188.3 157 56.1
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 1.7e-44 183.7 161 61.5
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 2.9e-44 183.0 146 56.8
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 1.5e-43 180.6 128 73.4
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 7.2e-43 178.3 163 58.3
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 2.7e-42 176.4 188 56.4
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 1.8e-41 173.7 118 70.3
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 1.1e-40 171.0 204 49.5
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 1.5e-40 170.6 208 47.1
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 7.0e-38 161.8 192 49.0
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 2.0e-37 160.2 95 78.9
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 1.1e-30 137.9 205 47.3
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 9.1e-30 134.8 82 75.6
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 1.3e-20 104.4 142 48.6
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 1.9e-19 100.5 149 45.0
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 1.9e-19 100.5 97 58.8
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 6.8e-17 92.0 99 50.5
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 7.5e-16 88.6 154 31.8
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 2.0e-13 80.5 50 72.0
Cre06.g295826 Chlamydomonas reinhardtii HOM05D005796 ORTHO05D007054 1.5e-08 64.3 129 24.8
Cre11.g467679 Chlamydomonas reinhardtii HOM05D019738 ORTHO05D022279 4.9e-07 59.3 158 26.6
C09p08830 Brassica napus HOM05D005796 ORTHO05D007054 1.4e-06 57.8 36 61.1
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 5.4e-06 55.8 106 35.8


User provided reference genes

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