Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2452 Papaver somniferum HOM05D004872 ORTHO05D006050 2.5e-85 318.9 181 100.0
PSO017G5814 Papaver somniferum HOM05D004872 ORTHO05D006050 2.5e-85 318.9 181 100.0
PSO529G0002 Papaver somniferum HOM05D004872 ORTHO05D006050 2.5e-85 318.9 181 100.0
PSO705G0001 Papaver somniferum HOM05D004872 ORTHO05D006050 2.5e-85 318.9 181 100.0
PSO591G0356 Papaver somniferum HOM05D004872 ORTHO05D006050 7.2e-85 317.4 181 99.4
PSO591G0248 Papaver somniferum HOM05D004872 ORTHO05D006050 9.4e-85 317.0 181 99.4
PSO541G2017 Papaver somniferum HOM05D004872 ORTHO05D006050 6.1e-84 314.3 181 97.8
Peaxi162Scf00025g02826 Petunia axillaris HOM05D004872 ORTHO05D006050 4.0e-35 152.1 138 58.7
Dinv22205 Davidia involucrata HOM05D004872 ORTHO05D006050 1.3e-33 147.1 137 58.4
FAN25G2824 Fragaria x ananassa HOM05D004872 ORTHO05D006050 1.3e-33 147.1 113 64.6
Prupe.7G012800 Prunus persica HOM05D004872 ORTHO05D006050 1.3e-33 147.1 157 51.0
FvH4_3g25170 Fragaria vesca HOM05D004872 ORTHO05D006050 1.7e-33 146.7 113 64.6
Cpa.g.sc34.184 Carica papaya HOM05D004872 ORTHO05D006050 3.7e-33 145.6 181 50.8
RcHm_v2.0_Chr5g0046151 Rosa chinensis HOM05D004872 ORTHO05D006050 3.7e-33 145.6 156 59.0
Manes.09G068000 Manihot esculenta HOM05D004872 ORTHO05D006050 8.3e-33 144.4 155 57.4
Prupe.4G268800 Prunus persica HOM05D004872 ORTHO05D006050 1.4e-32 143.7 156 50.0
Thhalv10019047m.g Eutrema salsugineum HOM05D004872 ORTHO05D006050 4.1e-32 142.1 142 56.3
TAR633G0253 Trochodendron aralioides HOM05D004872 ORTHO05D006050 5.4e-32 141.7 154 57.8
MSTRG.1742 Avicennia marina HOM05D004872 ORTHO05D006050 7.0e-32 141.4 156 54.5
CAN.G1549.27 Capsicum annuum HOM05D004872 ORTHO05D006050 7.0e-32 141.4 155 52.9
Duzib150G1163 Durio zibethinus HOM05D004872 ORTHO05D006050 7.0e-32 141.4 164 48.8
Rhsim07G0167900 Rhododendron simsii HOM05D004872 ORTHO05D006050 1.2e-31 140.6 154 58.4
Thecc.09G254600 Theobroma cacao HOM05D004872 ORTHO05D006050 1.2e-31 140.6 138 53.6
Atru.chr4.2930 Acer truncatum HOM05D004872 ORTHO05D006050 4.6e-31 138.7 139 58.3
FAN11G3172 Fragaria x ananassa HOM05D004872 ORTHO05D006050 4.6e-31 138.7 108 63.9
QL01p016491 Quercus lobata HOM05D004872 ORTHO05D006050 4.6e-31 138.7 107 60.7
QL01p024148 Quercus lobata HOM05D004872 ORTHO05D006050 4.6e-31 138.7 107 60.7
Cc11_g04500 Coffea canephora HOM05D004872 ORTHO05D006050 1.3e-30 137.1 117 57.3
Lsat_1_v5_gn_3_110040 Lactuca sativa HOM05D004872 ORTHO05D006050 1.7e-30 136.7 139 57.6
arahy.Tifrunner.gnm1.ann1.K1U5S9 Arachis hypogaea HOM05D004872 ORTHO05D006050 2.3e-30 136.3 147 51.7
Sabra13G0065000 Salix brachista HOM05D004872 ORTHO05D006050 2.3e-30 136.3 161 54.7
Potri.013G075500 Populus trichocarpa HOM05D004872 ORTHO05D006050 3.0e-30 136.0 115 64.3
PGSC0003DMG400003977 Solanum tuberosum HOM05D004872 ORTHO05D006050 3.0e-30 136.0 174 55.2
arahy.Tifrunner.gnm1.ann1.U00P2R Arachis hypogaea HOM05D004872 ORTHO05D006050 6.6e-30 134.8 131 55.7
ECA233G5422 Erigeron canadensis HOM05D004872 ORTHO05D006050 8.6e-30 134.4 110 61.8
HanXRQChr08g0217181 Helianthus annuus HOM05D004872 ORTHO05D006050 8.6e-30 134.4 112 61.6
Sp4g26910 Schrenkiella parvula HOM05D004872 ORTHO05D006050 8.6e-30 134.4 115 60.9
AL4G43900 Arabidopsis lyrata HOM05D004872 ORTHO05D006050 2.5e-29 132.9 142 52.8
GSVIVG01037356001 Vitis vinifera HOM05D004872 ORTHO05D006050 2.5e-29 132.9 118 56.8
arahy.Tifrunner.gnm1.ann1.EX2XSN Arachis hypogaea HOM05D004872 ORTHO05D006050 3.3e-29 132.5 131 54.2
SalBow6G3136 Salvia bowleyana HOM05D004872 ORTHO05D006050 3.3e-29 132.5 136 55.9
CiPaw.13G148000 Carya illinoinensis HOM05D004872 ORTHO05D006050 4.3e-29 132.1 155 48.4
CSS0006428 Camellia sinensis var. sinensis HOM05D004872 ORTHO05D006050 5.6e-29 131.7 139 52.5
CANSAT54G2026 Cannabis sativa HOM05D004872 ORTHO05D006050 5.6e-29 131.7 142 55.6
Haze_23271 Corylus avellana HOM05D004500 ORTHO05D005775 7.3e-29 131.3 138 51.4
Nitab4.5_0002138g0010 Nicotiana tabacum HOM05D004872 ORTHO05D006050 7.3e-29 131.3 156 55.1
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 9.5e-29 131.0 138 54.3
COL.COLO4_24934 Corchorus olitorius HOM05D004872 ORTHO05D006050 1.6e-28 130.2 126 54.0
Nn2g15815 Nelumbo nucifera HOM05D004872 ORTHO05D006050 1.6e-28 130.2 156 52.6
SGA_v2.0_scaffold144G35815 Striga asiatica HOM05D004872 ORTHO05D006050 2.1e-28 129.8 138 52.2
Ciclev10006059m.g Citrus clementina HOM05D004872 ORTHO05D006050 2.8e-28 129.4 140 53.6
Gohir.A09G108400 Gossypium hirsutum HOM05D004872 ORTHO05D006050 2.8e-28 129.4 138 50.0
Lsat_1_v5_gn_8_24740 Lactuca sativa HOM05D004872 ORTHO05D006050 2.8e-28 129.4 133 54.9
THA.LOC104816943 Tarenaya hassleriana HOM05D004872 ORTHO05D006050 2.8e-28 129.4 118 54.2
ClCG02G022680 Citrullus lanatus HOM05D004872 ORTHO05D006050 3.6e-28 129.0 140 53.6
Glyma.01G027700 Glycine max HOM05D004872 ORTHO05D006050 3.6e-28 129.0 138 51.4
Glyma.08G136100 Glycine max HOM05D004872 ORTHO05D006050 3.6e-28 129.0 151 49.0
Aa31LG1G26360 Aethionema arabicum HOM05D004872 ORTHO05D006050 4.7e-28 128.6 114 59.6
Cfa009914 Carpinus fangiana HOM05D004872 ORTHO05D006050 4.7e-28 128.6 139 51.1
AT2G44820 Arabidopsis thaliana HOM05D004872 ORTHO05D006050 8.0e-28 127.9 143 51.7
arahy.Tifrunner.gnm1.ann1.R4J47E Arachis hypogaea HOM05D004872 ORTHO05D006050 1.1e-27 127.5 132 52.3
DCAR_030961 Daucus carota HOM05D004872 ORTHO05D006050 1.1e-27 127.5 150 50.7
Nn8g39701 Nelumbo nucifera HOM05D004872 ORTHO05D006050 1.4e-27 127.1 138 52.9
Sc11g0003110 Simmondsia chinensis HOM05D004872 ORTHO05D006050 1.4e-27 127.1 137 54.0
Gohir.D09G105300 Gossypium hirsutum HOM05D004872 ORTHO05D006050 1.8e-27 126.7 161 50.9
CiPaw.14G110500 Carya illinoinensis HOM05D004872 ORTHO05D006050 2.3e-27 126.3 111 55.0
Eucgr.J02277 Eucalyptus grandis HOM05D004872 ORTHO05D006050 2.3e-27 126.3 138 55.1
MD12G1010900 Malus domestica HOM05D004872 ORTHO05D006050 2.3e-27 126.3 138 50.0
MELO3C014544.2 Cucumis melo HOM05D004872 ORTHO05D006050 3.1e-27 125.9 141 51.1
Migut.E01400 Erythranthe guttata HOM05D004872 ORTHO05D006050 3.1e-27 125.9 136 52.2
Nitab4.5_0001582g0110 Nicotiana tabacum HOM05D004872 ORTHO05D006050 3.1e-27 125.9 161 52.2
Lj6g0013181 Lotus japonicus HOM05D004872 ORTHO05D006050 4.0e-27 125.6 141 50.4
Aqoxy1G01418 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 5.2e-27 125.2 142 53.5
Lj6g0009628 Lotus japonicus HOM05D004872 ORTHO05D006050 5.2e-27 125.2 138 50.7
CsaV3_6G038800 Cucumis sativus L. HOM05D004872 ORTHO05D006050 6.8e-27 124.8 139 51.1
HanXRQChr10g0315331 Helianthus annuus HOM05D004872 ORTHO05D006050 8.9e-27 124.4 112 58.0
Aqoxy2G00467 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 2.6e-26 122.9 139 52.5
Aqoxy7G03169 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 3.4e-26 122.5 165 45.5
Carub.0004s2739 Capsella rubella HOM05D004872 ORTHO05D006050 3.4e-26 122.5 161 45.3
Solyc11g005570.2 Solanum lycopersicum HOM05D004872 ORTHO05D006050 3.4e-26 122.5 167 51.5
Sopen11g001540 Solanum pennellii HOM05D004872 ORTHO05D006050 3.4e-26 122.5 167 51.5
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 4.4e-26 122.1 98 60.2
Aqoxy72s001 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 4.4e-26 122.1 137 53.3
Medtr7g096840 Medicago truncatula HOM05D004872 ORTHO05D006050 4.4e-26 122.1 137 48.9
Gorai.006G122300 Gossypium raimondii HOM05D004872 ORTHO05D006050 5.8e-26 121.7 162 51.2
Psat2g130480 Pisum sativum HOM05D004872 ORTHO05D006050 5.8e-26 121.7 139 47.5
BcaB02g10512 Brassica carinata HOM05D004872 ORTHO05D006050 7.5e-26 121.3 138 51.4
CDE05G2894 Ceratophyllum demersum HOM05D004872 ORTHO05D006050 7.5e-26 121.3 153 51.6
TPR.G29301 Trifolium pratense HOM05D004872 ORTHO05D006050 7.5e-26 121.3 141 48.2
A05p12650 Brassica napus HOM05D004872 ORTHO05D006050 9.8e-26 120.9 142 50.0
TWI31G0308 Tripterygium wilfordii HOM05D004872 ORTHO05D006050 9.8e-26 120.9 156 48.7
BraA05t20203Z Brassica rapa HOM05D004872 ORTHO05D006050 1.3e-25 120.6 142 50.0
Lalb_Chr04g0249071 Lupinus albus HOM05D004872 ORTHO05D006050 1.7e-25 120.2 106 57.5
TPR.G26917 Trifolium pratense HOM05D004872 ORTHO05D006050 2.2e-25 119.8 141 47.5
A05p04990 Brassica napus HOM05D004872 ORTHO05D006050 3.7e-25 119.0 115 55.7
CARHR140030 Cardamine hirsuta HOM05D004872 ORTHO05D006050 3.7e-25 119.0 133 51.1
Phvul.002G255800 Phaseolus vulgaris HOM05D004872 ORTHO05D006050 3.7e-25 119.0 143 46.9
BolC4t22211H Brassica oleracea HOM05D004872 ORTHO05D006050 8.3e-25 117.9 115 54.8
BcaC02g12267 Brassica carinata HOM05D004872 ORTHO05D006050 1.1e-24 117.5 115 54.8
C04p05820 Brassica napus HOM05D004872 ORTHO05D006050 1.1e-24 117.5 115 54.8
vmacro05825 Vaccinium macrocarpon HOM05D004872 ORTHO05D006050 1.1e-24 117.5 170 43.5
Hma1.2p1_0299F.1_g117840 Hydrangea macrophylla HOM05D004872 ORTHO05D006050 1.9e-24 116.7 137 47.4
BcaB02g08868 Brassica carinata HOM05D004872 ORTHO05D006050 3.2e-24 115.9 112 53.6
ECA236G0590 Erigeron canadensis HOM05D004872 ORTHO05D006050 3.2e-24 115.9 101 58.4
MBI17_g09534_MAGBIO Magnolia biondii HOM05D004872 ORTHO05D006050 3.2e-24 115.9 155 51.0
VMungo0251G0214 Vigna mungo HOM05D004872 ORTHO05D006050 3.2e-24 115.9 154 44.2
Oeu040527.1 Olea europaea HOM05D004872 ORTHO05D006050 4.1e-24 115.5 131 51.9
Sp2g10980 Schrenkiella parvula HOM05D004872 ORTHO05D006050 4.1e-24 115.5 115 54.8
BolC4t23202H Brassica oleracea HOM05D004872 ORTHO05D006050 5.4e-24 115.2 136 49.3
BraA05t19473Z Brassica rapa HOM05D004872 ORTHO05D006050 9.2e-24 114.4 115 54.8
Manes.08G069866 Manihot esculenta HOM05D004872 ORTHO05D006050 9.2e-24 114.4 164 45.7
Oeu026038.1 Olea europaea HOM05D004872 ORTHO05D006050 9.2e-24 114.4 131 51.1
ATR0665G028 Amborella trichopoda HOM05D004872 ORTHO05D006050 1.6e-23 113.6 107 56.1
EL10Ac4g10086 Beta vulgaris HOM05D004872 ORTHO05D006050 2.1e-23 113.2 105 53.3
AUR62006565 Chenopodium quinoa HOM05D004872 ORTHO05D006050 3.5e-23 112.5 105 54.3
Aa31LG9G10050 Aethionema arabicum HOM05D004872 ORTHO05D006050 4.6e-23 112.1 146 49.3
Hund07423 Selenicereus undatus HOM05D004872 ORTHO05D006050 6.0e-23 111.7 105 58.1
HPP92_015870 Vanilla planifolia HOM05D004872 ORTHO05D006050 6.0e-23 111.7 119 52.1
Sed0007255 Sechium edule HOM05D004872 ORTHO05D006050 1.0e-22 110.9 118 55.1
AUR62000220 Chenopodium quinoa HOM05D004872 ORTHO05D006050 1.7e-22 110.2 182 47.8
Ah.04g159640 Amaranthus hybridus HOM05D004872 ORTHO05D006050 3.0e-22 109.4 136 49.3
AL7G43510 Arabidopsis lyrata HOM05D004872 ORTHO05D006050 2.5e-21 106.3 114 50.9
Os01g0224500 Oryza sativa ssp. japonica HOM05D004872 ORTHO05D006050 3.6e-20 102.4 138 44.9
CiPaw.13G148200 Carya illinoinensis HOM05D004872 ORTHO05D006050 3.4e-18 95.9 153 41.8
arahy.Tifrunner.gnm1.ann1.X2Q8UN Arachis hypogaea HOM05D004872 ORTHO05D006050 5.8e-18 95.1 143 40.6
Zm00001eb192850 Zea mays HOM05D004872 ORTHO05D006050 4.9e-17 92.0 139 41.0
BcaC02g11364 Brassica carinata HOM05D004872 ORTHO05D006050 8.3e-17 91.3 122 42.6
Zm00001eb281550 Zea mays HOM05D004872 ORTHO05D006050 1.1e-16 90.9 95 50.5
Sc11g0003120 Simmondsia chinensis HOM05D004872 ORTHO05D006050 1.0e-14 84.3 109 48.6
PGR102G1802 Punica granatum HOM05D004872 ORTHO05D006050 1.4e-11 73.9 144 35.4
Zm00001eb416880 Zea mays HOM05D004872 ORTHO05D006050 5.2e-11 72.0 75 49.3
Aqoxy7G03168 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 1.2e-10 70.9 128 36.7
TPR.G14060 Trifolium pratense HOM05D004872 ORTHO05D006050 3.8e-09 65.9 113 41.6
SEGI_13451 Sequoiadendron giganteum HOM05D004872 ORTHO05D006050 6.4e-09 65.1 115 34.8
Pp3c23_7100 Physcomitrium patens HOM05D004872 ORTHO05D006050 2.7e-07 59.7 136 28.7
AL225U10020 Arabidopsis lyrata HOM05D004872 ORTHO05D006050 3.5e-07 59.3 82 46.3
Ca_21429_v3 Cicer arietinum L. HOM05D004872 ORTHO05D006050 4.6e-07 58.9 83 43.4
Atru.chr1.3406 Acer truncatum HOM05D004872 ORTHO05D006050 6.0e-07 58.5 55 56.4
Mapoly0036s0026 Marchantia polymorpha HOM05D004872 ORTHO05D006050 2.3e-06 56.6 136 30.1
CDE05G2556 Ceratophyllum demersum HOM05D004872 ORTHO05D006050 3.0e-06 56.2 133 32.3


User provided reference genes

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