Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 1.1e-85 320.1 179 100.0
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 3.8e-78 295.0 177 94.4
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 1.1e-26 124.0 174 49.4
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 1.7e-25 120.2 116 62.9
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 1.1e-24 117.5 153 52.9
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 1.4e-24 117.1 158 50.6
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 2.4e-24 116.3 133 57.9
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 3.1e-24 115.9 135 54.1
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 4.1e-24 115.5 90 66.7
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 4.1e-24 115.5 90 66.7
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 4.1e-24 115.5 131 56.5
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 5.3e-24 115.2 165 49.1
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 5.3e-24 115.2 156 49.4
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 5.3e-24 115.2 134 53.0
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 7.0e-24 114.8 88 70.5
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 9.1e-24 114.4 134 55.2
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 1.2e-23 114.0 74 81.1
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 1.2e-23 114.0 118 59.3
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 1.2e-23 114.0 158 48.1
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 1.6e-23 113.6 130 59.2
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 3.5e-23 112.5 126 57.9
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 3.5e-23 112.5 91 69.2
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 3.5e-23 112.5 102 60.8
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 4.5e-23 112.1 179 48.6
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 5.9e-23 111.7 87 71.3
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 5.9e-23 111.7 101 61.4
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 7.7e-23 111.3 134 57.5
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 7.7e-23 111.3 173 51.4
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.0e-22 110.9 188 48.9
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 1.3e-22 110.5 132 52.3
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 1.3e-22 110.5 122 56.6
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 1.3e-22 110.5 176 47.7
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 1.3e-22 110.5 123 55.3
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 1.7e-22 110.2 127 53.5
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 1.7e-22 110.2 123 56.1
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 2.2e-22 109.8 123 56.1
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 2.2e-22 109.8 87 69.0
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 2.2e-22 109.8 137 52.6
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 2.2e-22 109.8 129 56.6
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 3.8e-22 109.0 135 55.6
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 3.8e-22 109.0 91 65.9
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 3.8e-22 109.0 158 46.8
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 3.8e-22 109.0 84 66.7
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 3.8e-22 109.0 129 55.0
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 6.5e-22 108.2 124 53.2
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 6.5e-22 108.2 123 55.3
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 6.5e-22 108.2 123 55.3
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 6.5e-22 108.2 124 55.6
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 8.5e-22 107.8 125 54.4
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 1.1e-21 107.5 123 55.3
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 1.5e-21 107.1 64 79.7
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 1.5e-21 107.1 121 57.9
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 1.5e-21 107.1 89 61.8
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 1.9e-21 106.7 87 63.2
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 2.5e-21 106.3 168 47.0
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 3.2e-21 105.9 147 49.7
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 3.2e-21 105.9 145 46.2
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 4.2e-21 105.5 68 73.5
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 4.2e-21 105.5 145 46.2
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 4.2e-21 105.5 121 57.0
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 5.5e-21 105.1 106 56.6
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 7.2e-21 104.8 121 57.0
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 7.2e-21 104.8 181 43.1
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 9.4e-21 104.4 147 49.0
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 9.4e-21 104.4 180 47.2
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 9.4e-21 104.4 177 45.8
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 9.4e-21 104.4 190 43.2
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 1.2e-20 104.0 92 62.0
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 1.6e-20 103.6 144 49.3
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 1.6e-20 103.6 117 57.3
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 2.7e-20 102.8 186 46.2
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 2.7e-20 102.8 63 79.4
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 4.7e-20 102.1 163 44.8
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 6.1e-20 101.7 153 47.7
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 6.1e-20 101.7 121 56.2
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 8.0e-20 101.3 124 52.4
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 8.0e-20 101.3 103 59.2
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 8.0e-20 101.3 85 64.7
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 8.0e-20 101.3 177 40.1
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 1.0e-19 100.9 170 46.5
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 1.0e-19 100.9 183 42.6
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 1.0e-19 100.9 183 42.6
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 1.0e-19 100.9 183 42.6
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 1.8e-19 100.1 87 63.2
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 1.8e-19 100.1 106 56.6
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 5.2e-19 98.6 78 66.7
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 5.2e-19 98.6 89 62.9
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 6.8e-19 98.2 183 43.2
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 1.2e-18 97.4 171 42.7
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 1.5e-18 97.1 71 71.8
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 7.5e-18 94.7 145 46.9
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 7.5e-18 94.7 145 46.9
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 1.3e-17 94.0 173 43.4
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 1.6e-15 87.0 84 52.4
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 2.0e-15 86.7 59 71.2
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 4.5e-15 85.5 169 39.1
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 1.3e-14 84.0 164 40.9
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 2.2e-14 83.2 78 59.0
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 2.9e-14 82.8 65 61.5
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 3.2e-13 79.3 202 35.1
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.2e-10 70.9 69 55.1
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 2.8e-09 66.2 144 36.1
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 2.4e-08 63.2 70 50.0
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 3.5e-07 59.3 99 42.4
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 1.0e-06 57.8 109 34.9
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 2.3e-06 56.6 132 34.8


User provided reference genes

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