Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.2e-195 686.4 358 100.0
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 5.1e-175 617.8 358 90.5
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 3.4e-94 349.4 369 53.9
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 2.9e-90 336.3 372 51.9
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.2e-85 320.1 368 51.4
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 4.9e-85 318.9 368 51.4
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 6.4e-85 318.5 368 51.4
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 5.4e-84 315.5 367 51.0
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 2.7e-83 313.2 330 52.7
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.7e-82 310.5 370 49.2
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 1.7e-82 310.5 349 52.1
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 1.7e-82 310.5 365 49.0
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 5.0e-82 308.9 372 50.3
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.5e-81 307.4 368 49.2
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 2.1e-80 303.5 368 47.3
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 3.6e-80 302.8 327 52.9
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 2.3e-79 300.1 362 48.3
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 1.5e-78 297.4 361 46.5
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 2.0e-78 297.0 358 47.2
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 4.9e-77 292.4 361 48.2
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.9e-76 290.4 365 47.7
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 1.6e-75 287.3 365 44.7
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 3.5e-75 286.2 326 49.7
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 4.6e-75 285.8 361 47.4
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 7.8e-75 285.0 364 46.4
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 1.3e-74 284.3 369 46.6
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.3e-74 284.3 326 49.4
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 1.7e-74 283.9 326 49.4
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 3.9e-74 282.7 348 46.0
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 3.9e-74 282.7 366 46.4
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 1.5e-73 280.8 367 43.3
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 2.1e-72 276.9 359 46.8
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 8.1e-72 275.0 359 46.0
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 1.4e-71 274.2 316 50.3
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 3.1e-71 273.1 359 47.4
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 3.1e-71 273.1 377 43.5
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 8.9e-71 271.6 359 46.0
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 1.5e-70 270.8 365 43.8
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 1.3e-69 267.7 368 42.9
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 6.4e-69 265.4 381 43.6
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 1.1e-68 264.6 363 44.1
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 3.2e-68 263.1 365 44.9
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 7.1e-68 261.9 354 43.5
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 1.6e-67 260.8 349 44.1
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.6e-67 260.8 381 42.5
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 2.1e-67 260.4 367 43.1
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 2.7e-67 260.0 347 45.8
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 6.0e-67 258.8 357 44.0
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 1.7e-66 257.3 370 43.8
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 3.9e-66 256.1 357 44.5
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 5.1e-66 255.8 357 45.9
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 1.1e-65 254.6 316 49.4
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 3.3e-65 253.1 321 44.5
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 3.3e-65 253.1 343 46.1
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 8.1e-64 248.4 310 46.8
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 1.5e-62 244.2 321 43.6
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 2.9e-61 240.0 362 42.5
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 3.8e-61 239.6 347 42.4
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 4.9e-61 239.2 356 43.3
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 1.2e-59 234.6 331 43.8
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 2.1e-59 233.8 372 41.1
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 7.8e-59 231.9 300 46.3
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 3.9e-58 229.6 336 41.1
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 1.1e-57 228.0 311 43.1
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 1.5e-57 227.6 283 49.8
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 3.6e-56 223.0 302 46.0
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 1.4e-55 221.1 352 40.3
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 2.0e-54 217.2 359 40.4
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 2.0e-54 217.2 359 40.4
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 9.3e-52 208.4 325 42.2
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 9.3e-52 208.4 303 40.9
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 1.2e-51 208.0 307 42.0
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 1.2e-51 208.0 356 40.2
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 1.6e-51 207.6 272 46.3
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.6e-51 207.6 270 46.7
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 3.5e-51 206.5 254 49.2
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 8.1e-48 195.3 215 51.2
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 4.0e-47 193.0 287 40.4
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 2.9e-45 186.8 371 35.8
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 1.1e-44 184.9 288 38.9
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 3.0e-42 176.8 210 52.9
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 3.3e-41 173.3 297 39.4
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 5.6e-41 172.6 217 48.8
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 7.4e-41 172.2 280 39.3
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 9.6e-41 171.8 341 34.6
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 9.9e-38 161.8 359 33.4
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 2.4e-36 157.1 335 36.4
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 7.1e-36 155.6 362 31.8
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 9.3e-36 155.2 335 36.1
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 5.1e-34 149.4 348 33.9
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 8.7e-34 148.7 360 32.8
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 1.5e-33 147.9 348 33.3
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 2.5e-33 147.1 350 34.0
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 2.5e-33 147.1 348 33.3
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 2.5e-33 147.1 350 34.0
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 2.5e-33 147.1 350 34.0
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 3.3e-33 146.7 343 33.8
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 7.4e-33 145.6 343 33.2
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 2.8e-32 143.7 297 34.0
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 4.0e-31 139.8 108 63.0
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 1.1e-28 131.7 352 30.4
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 4.2e-28 129.8 312 33.7
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 2.1e-27 127.5 279 33.7
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 8.7e-26 122.1 149 47.7
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.8e-23 114.4 351 31.9
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 3.1e-23 113.6 272 33.5
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 6.9e-23 112.5 344 29.9
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 5.9e-22 109.4 265 31.3
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 2.2e-21 107.5 295 32.2
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 7.2e-20 102.4 282 30.9
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.1e-17 95.1 235 33.6
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.3e-13 81.6 117 40.2
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.3e-13 81.6 117 40.2
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 2.1e-11 74.3 82 50.0
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 3.7e-08 63.5 65 46.2


User provided reference genes

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