Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2189 Papaver somniferum HOM05D002211 ORTHO05D002206 3.6e-90 335.1 197 100.0
PSO675G4717 Papaver somniferum HOM05D002211 ORTHO05D002206 3.0e-60 235.7 198 80.8
PSO357G0293 Papaver somniferum HOM05D002211 ORTHO05D002206 2.2e-31 139.8 206 55.3
PSO170G3935 Papaver somniferum HOM05D002211 ORTHO05D002206 1.1e-30 137.5 199 54.3
Thecc.05G260900 Theobroma cacao HOM05D002211 ORTHO05D002206 8.8e-20 101.3 206 36.4
COL.COLO4_20545 Corchorus olitorius HOM05D002211 ORTHO05D002206 9.7e-19 97.8 203 36.5
Duzib177G1183 Durio zibethinus HOM05D002211 ORTHO05D002206 1.7e-18 97.1 207 36.7
Gohir.D11G250800 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.7e-18 97.1 212 35.8
Gohir.A11G241500 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.1e-17 94.4 211 33.6
Duzib106G0223 Durio zibethinus HOM05D002211 ORTHO05D002206 9.1e-17 91.3 209 33.0
Duzib128G1915 Durio zibethinus HOM05D002211 ORTHO05D002206 1.2e-16 90.9 208 35.6
MD04G1235700 Malus domestica HOM05D002211 ORTHO05D002206 2.6e-16 89.7 207 38.6
FvH4_6g01210 Fragaria vesca HOM05D002211 ORTHO05D002206 4.5e-16 89.0 199 32.2
FAN05G2499 Fragaria x ananassa HOM05D002211 ORTHO05D002206 4.5e-16 89.0 199 32.2
TWI60G0660 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 4.5e-16 89.0 212 36.8
GSVIVG01026373001 Vitis vinifera HOM05D002211 ORTHO05D002206 4.5e-16 89.0 198 34.8
FAN05G1779 Fragaria x ananassa HOM05D002211 ORTHO05D002206 5.9e-16 88.6 199 32.2
Nn5g27522 Nelumbo nucifera HOM05D002211 ORTHO05D002206 1.3e-15 87.4 200 36.0
Prupe.6G355600 Prunus persica HOM05D002211 ORTHO05D002206 8.5e-15 84.7 206 32.0
Potri.013G052600 Populus trichocarpa HOM05D002211 ORTHO05D002206 1.5e-14 84.0 197 35.0
MD12G1253400 Malus domestica HOM05D002211 ORTHO05D002206 1.9e-14 83.6 204 40.2
CANSAT54G2545 Cannabis sativa HOM05D002211 ORTHO05D002206 2.5e-14 83.2 200 38.0
Haze_04489 Corylus avellana HOM05D002211 ORTHO05D002206 2.5e-14 83.2 205 41.0
PGR142G0339 Punica granatum HOM05D002211 ORTHO05D002206 7.2e-14 81.6 206 33.5
Aqoxy5G00111 Aquilegia oxysepala HOM05D002211 ORTHO05D002206 9.4e-14 81.3 197 34.5
Potri.019G029600 Populus trichocarpa HOM05D002211 ORTHO05D002206 1.6e-13 80.5 206 33.0
Nn1g08275 Nelumbo nucifera HOM05D002211 ORTHO05D002206 2.1e-13 80.1 194 36.1
RcHm_v2.0_Chr3g0448791 Rosa chinensis HOM05D002211 ORTHO05D002206 2.1e-13 80.1 208 31.7
TAR365G0725 Trochodendron aralioides HOM05D002211 ORTHO05D002206 2.7e-13 79.7 193 35.2
Cpa.g.sc51.66 Carica papaya HOM05D002211 ORTHO05D002206 4.7e-13 79.0 204 32.4
VMungo0540G2450 Vigna mungo HOM05D002211 ORTHO05D002206 1.0e-12 77.8 207 34.8
CiPaw.07G075600 Carya illinoinensis HOM05D002211 ORTHO05D002206 1.4e-12 77.4 200 33.5
Ciclev10022368m.g Citrus clementina HOM05D002211 ORTHO05D002206 1.4e-12 77.4 198 33.3
MD10G1152300 Malus domestica HOM05D002211 ORTHO05D002206 1.8e-12 77.0 202 32.7
Aqoxy5G00107 Aquilegia oxysepala HOM05D002211 ORTHO05D002206 3.0e-12 76.3 199 33.7
FAN02G1834 Fragaria x ananassa HOM05D002211 ORTHO05D002206 3.0e-12 76.3 221 28.5
TAR362G0774 Trochodendron aralioides HOM05D002211 ORTHO05D002206 3.0e-12 76.3 192 37.0
EL10Ac4g09798 Beta vulgaris HOM05D002211 ORTHO05D002206 5.2e-12 75.5 201 34.3
Gohir.A13G102400 Gossypium hirsutum HOM05D002211 ORTHO05D002206 5.2e-12 75.5 200 32.5
MBI07_g44687_MAGBIO Magnolia biondii HOM05D002211 ORTHO05D002206 5.2e-12 75.5 202 33.7
TWI32G0781 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 1.5e-11 73.9 193 32.6
arahy.Tifrunner.gnm1.ann1.ML5U0X Arachis hypogaea HOM05D002211 ORTHO05D002206 2.0e-11 73.6 205 46.3
Phvul.006G108100 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 2.0e-11 73.6 207 33.3
Eucgr.B02173 Eucalyptus grandis HOM05D002211 ORTHO05D002206 2.6e-11 73.2 205 30.7
Ca_09451_v3 Cicer arietinum L. HOM05D002211 ORTHO05D002206 4.4e-11 72.4 202 33.7
Medtr7g116610 Medicago truncatula HOM05D002211 ORTHO05D002206 4.4e-11 72.4 193 33.2
TPR.G4687 Trifolium pratense HOM05D002211 ORTHO05D002206 5.7e-11 72.0 198 34.3
Sabra13G0047200 Salix brachista HOM05D002211 ORTHO05D002206 9.7e-11 71.2 185 34.6
Lj3g0001912 Lotus japonicus HOM05D002211 ORTHO05D002206 1.3e-10 70.9 201 32.3
Psat0s3038g0080 Pisum sativum HOM05D002211 ORTHO05D002206 1.3e-10 70.9 199 31.7
Gorai.007G268900 Gossypium raimondii HOM05D002211 ORTHO05D002206 1.7e-10 70.5 202 31.7
Dinv10852 Davidia involucrata HOM05D002211 ORTHO05D002206 2.8e-10 69.7 200 32.0
Manes.09G144900 Manihot esculenta HOM05D002211 ORTHO05D002206 2.8e-10 69.7 191 35.6
Prupe.8G190600 Prunus persica HOM05D002211 ORTHO05D002206 2.8e-10 69.7 200 30.0
Glyma.19G250900 Glycine max HOM05D002211 ORTHO05D002206 3.7e-10 69.3 203 36.5
MD05G1159900 Malus domestica HOM05D002211 ORTHO05D002206 6.3e-10 68.6 203 30.5
RcHm_v2.0_Chr6g0282871 Rosa chinensis HOM05D002211 ORTHO05D002206 8.2e-10 68.2 203 29.6
Lj1g0002409 Lotus japonicus HOM05D002211 ORTHO05D002206 1.4e-09 67.4 213 30.5
MBI07_g35241_MAGBIO Magnolia biondii HOM05D002211 ORTHO05D002206 1.4e-09 67.4 195 32.8
Manes.12G053700 Manihot esculenta HOM05D002211 ORTHO05D002206 1.4e-09 67.4 202 32.2
MELO3C008671.2 Cucumis melo HOM05D002211 ORTHO05D002206 3.1e-09 66.2 206 30.6
FAN05G1484 Fragaria x ananassa HOM05D002211 ORTHO05D002206 3.1e-09 66.2 193 29.0
Glyma.13G008000 Glycine max HOM05D002211 ORTHO05D002206 3.1e-09 66.2 201 28.4
Psat0s3509g0040 Pisum sativum HOM05D002211 ORTHO05D002206 3.1e-09 66.2 209 30.1
Thecc.01G211400 Theobroma cacao HOM05D002211 ORTHO05D002206 5.3e-09 65.5 201 33.8
Ciclev10017076m.g Citrus clementina HOM05D002211 ORTHO05D002206 7.0e-09 65.1 192 32.8
Duzib138G0235 Durio zibethinus HOM05D002211 ORTHO05D002206 7.0e-09 65.1 202 32.2
Atru.chr2.1234 Acer truncatum HOM05D002211 ORTHO05D002206 1.6e-08 63.9 202 31.7
Oeu003632.1 Olea europaea HOM05D002211 ORTHO05D002206 1.6e-08 63.9 199 31.7
COL.COLO4_38590 Corchorus olitorius HOM05D002211 ORTHO05D002206 2.0e-08 63.5 202 32.7
CsaV3_2G010180 Cucumis sativus L. HOM05D002211 ORTHO05D002206 2.6e-08 63.2 206 30.1
FvH4_6g01200 Fragaria vesca HOM05D001040 ORTHO05D002795 2.6e-08 63.2 187 28.9
Eucgr.H04158 Eucalyptus grandis HOM05D002211 ORTHO05D002206 3.5e-08 62.8 92 41.3
Lalb_Chr07g0194521 Lupinus albus HOM05D002211 ORTHO05D002206 3.5e-08 62.8 195 30.8
MSTRG.9225 Avicennia marina HOM05D002211 ORTHO05D002206 7.7e-08 61.6 213 27.7
CSS0000478 Camellia sinensis var. sinensis HOM05D002211 ORTHO05D002206 7.7e-08 61.6 201 33.3
FAN24G0249 Fragaria x ananassa HOM05D002211 ORTHO05D002206 7.7e-08 61.6 200 30.0
Peaxi162Scf00071g00139 Petunia axillaris HOM05D002211 ORTHO05D002206 7.7e-08 61.6 199 29.1
TAR365G1226 Trochodendron aralioides HOM05D002211 ORTHO05D002206 7.7e-08 61.6 193 33.2
FvH4_2g17840 Fragaria vesca HOM05D002211 ORTHO05D002206 1.0e-07 61.2 200 28.5
BraA02t05441Z Brassica rapa HOM05D002211 ORTHO05D002206 1.3e-07 60.8 34 76.5
Phvul.010G031300 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 1.3e-07 60.8 201 27.4
Sp6g26000 Schrenkiella parvula HOM05D002211 ORTHO05D002206 1.3e-07 60.8 38 68.4
Sopen06g034470 Solanum pennellii HOM05D002211 ORTHO05D002206 1.3e-07 60.8 193 30.6
Actinidia34770 Actinidia chinensis HOM05D002211 ORTHO05D002206 1.7e-07 60.5 205 30.2
Dinv28814 Davidia involucrata HOM05D002211 ORTHO05D002206 1.7e-07 60.5 201 31.8
SalBow1G6037 Salvia bowleyana HOM05D002211 ORTHO05D002206 2.2e-07 60.1 90 41.1
VMungo0331G1849 Vigna mungo HOM05D002211 ORTHO05D002206 2.2e-07 60.1 201 27.9
CDE05G0436 Ceratophyllum demersum HOM05D002211 ORTHO05D002206 2.9e-07 59.7 190 29.5
CDE11G1194 Ceratophyllum demersum HOM05D002211 ORTHO05D002206 2.9e-07 59.7 195 28.2
Potri.002G250800 Populus trichocarpa HOM05D002211 ORTHO05D002206 2.9e-07 59.7 201 28.4
arahy.Tifrunner.gnm1.ann1.TRRB3R Arachis hypogaea HOM05D002211 ORTHO05D002206 3.8e-07 59.3 61 52.5
A02p04820 Brassica napus HOM05D002211 ORTHO05D002206 3.8e-07 59.3 77 40.3
Cpa.g.sc8.75 Carica papaya HOM05D002211 ORTHO05D002206 3.8e-07 59.3 196 30.1
Gorai.007G159300 Gossypium raimondii HOM05D002211 ORTHO05D002206 3.8e-07 59.3 202 29.2
Manes.08G147100 Manihot esculenta HOM05D002211 ORTHO05D002206 3.8e-07 59.3 185 31.4
C02p09800 Brassica napus HOM05D002211 ORTHO05D002206 5.0e-07 58.9 87 36.8
BolC2t06888H Brassica oleracea HOM05D002211 ORTHO05D002206 5.0e-07 58.9 87 36.8
Glyma.03G089800 Glycine max HOM05D002211 ORTHO05D002206 5.0e-07 58.9 201 26.4
Gohir.A11G142300 Gossypium hirsutum HOM05D002211 ORTHO05D002206 5.0e-07 58.9 201 28.9
Psat3g005480 Pisum sativum HOM05D002211 ORTHO05D002206 5.0e-07 58.9 192 30.2
CDE05G1888 Ceratophyllum demersum HOM05D002211 ORTHO05D002206 6.5e-07 58.5 190 30.5
Gorai.N003500 Gossypium raimondii HOM05D002211 ORTHO05D002206 6.5e-07 58.5 201 29.9
A10p21210 Brassica napus HOM05D002211 ORTHO05D002206 8.5e-07 58.2 205 26.3
C09p58640 Brassica napus HOM05D002211 ORTHO05D002206 8.5e-07 58.2 205 26.3
BolC9t58706H Brassica oleracea HOM05D002211 ORTHO05D002206 8.5e-07 58.2 205 26.3
Migut.F02065 Erythranthe guttata HOM05D002211 ORTHO05D002206 8.5e-07 58.2 208 27.4
Gohir.D11G148600 Gossypium hirsutum HOM05D002211 ORTHO05D002206 8.5e-07 58.2 202 29.2
Solyc06g083080.3 Solanum lycopersicum HOM05D002211 ORTHO05D002206 8.5e-07 58.2 193 30.1
EL10Ac5g10628 Beta vulgaris HOM05D002211 ORTHO05D002206 1.1e-06 57.8 204 30.4
BcaB08g36688 Brassica carinata HOM05D002211 ORTHO05D002206 1.1e-06 57.8 205 26.3
BraA10t44184Z Brassica rapa HOM05D002211 ORTHO05D002206 1.1e-06 57.8 198 25.8
Haze_23452 Corylus avellana HOM05D002211 ORTHO05D002206 1.1e-06 57.8 202 30.7
Glyma.03G253400 Glycine max HOM05D002211 ORTHO05D002206 1.1e-06 57.8 199 32.7
Gohir.D07G167000 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.1e-06 57.8 200 29.0
Sabra19G0036300 Salix brachista HOM05D002211 ORTHO05D002206 1.1e-06 57.8 186 30.6
Sabra19G0039400 Salix brachista HOM05D002211 ORTHO05D002206 1.1e-06 57.8 186 30.6
PGR044G2650 Punica granatum HOM05D002211 ORTHO05D002206 1.5e-06 57.4 37 70.3
Lsat_1_v5_gn_9_16221 Lactuca sativa HOM05D002211 ORTHO05D002206 1.9e-06 57.0 203 29.1
Carub.0006s1659 Capsella rubella HOM05D002211 ORTHO05D002206 2.5e-06 56.6 191 27.7
MBI07_g09899_MAGBIO Magnolia biondii HOM05D002211 ORTHO05D002206 2.5e-06 56.6 44 65.9
Oeu001241.1 Olea europaea HOM05D002211 ORTHO05D002206 2.5e-06 56.6 204 27.9
THA.LOC104827277 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 2.5e-06 56.6 45 60.0
Aa31LG11G11290 Aethionema arabicum HOM05D002211 ORTHO05D002206 3.2e-06 56.2 33 75.8
ClCG11G010190 Citrullus lanatus HOM05D002211 ORTHO05D002206 3.2e-06 56.2 189 29.6
Thhalv10014852m.g Eutrema salsugineum HOM05D002211 ORTHO05D002206 3.2e-06 56.2 38 63.2
Nitab4.5_0004201g0020 Nicotiana tabacum HOM05D002211 ORTHO05D002206 3.2e-06 56.2 196 29.1
Psat4g206640 Pisum sativum HOM05D002211 ORTHO05D002206 3.2e-06 56.2 200 28.0
THA.LOC104820745 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 3.2e-06 56.2 74 44.6
HanXRQChr16g0507881 Helianthus annuus HOM05D002211 ORTHO05D002206 4.2e-06 55.8 187 30.5
Manes.13G054300 Manihot esculenta HOM05D002211 ORTHO05D002206 4.2e-06 55.8 194 29.4
Gohir.D07G203200 Gossypium hirsutum HOM05D002211 ORTHO05D002206 5.5e-06 55.5 199 29.6
Lalb_Chr04g0261851 Lupinus albus HOM05D002211 ORTHO05D002206 5.5e-06 55.5 212 31.1
Glyma.20G220500 Glycine max HOM05D002211 ORTHO05D002206 7.2e-06 55.1 194 28.9
Solyc04g050790.3 Solanum lycopersicum HOM05D002211 ORTHO05D002206 7.2e-06 55.1 56 53.6
Sopen04g021740 Solanum pennellii HOM05D002211 ORTHO05D002206 7.2e-06 55.1 56 53.6
PGSC0003DMG400004509 Solanum tuberosum HOM05D002211 ORTHO05D002206 7.2e-06 55.1 56 53.6
MSTRG.17972 Avicennia marina HOM05D002211 ORTHO05D002206 9.4e-06 54.7 202 30.7
QL09p046170 Quercus lobata HOM05D002211 ORTHO05D002206 9.4e-06 54.7 197 29.4
SGA_v2.0_scaffold566G52949 Striga asiatica HOM05D002211 ORTHO05D002206 9.4e-06 54.7 200 29.5


User provided reference genes

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